Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,293,032 IS1 (–) +8 bp intergenic (‑110/‑488) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 257908 =NA (NA)43 (0.900) 39/282 0.2 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 1293039 0 (0.000)intergenic (‑117/‑488) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
* ? NC_000913 1293032 =0 (0.000)43 (0.900) 36/282 0.3 100% intergenic (‑110/‑495) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 1979270 NA (NA)noncoding (1/768 nt) IS1 repeat region

TTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGAC  >  NC_000913/1292897‑1293179
                                                                                                                                              |                                                                                                                                            
ttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTgccg                                                                                                                                              >  1:330749/1‑143 (MQ=255)
   ccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatccccTTGTGCCGCCa                                                                                                                                           <  2:221235‑M1/11‑1 (MQ=255)
   aGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggt                                                                                                                                           <  1:236737‑M2/143‑4 (MQ=255)
    gAATTTGAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATATAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggta                                                                                                                                          >  2:302712‑M2/1‑139 (MQ=255)
      gcggtgcgtttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaata                                                                                                                                        >  1:801410‑M1/130‑143 (MQ=255)
      aTTGTAAGTGCTTCGCGCATTGTAGTAATCTCAAACTTACATTGGTGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaat                                                                                                                                        >  1:13897‑M2/1‑137 (MQ=255)
        ggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaaaccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataaa                                                                                                                                      <  2:432163‑M1/16‑1 (MQ=255)
         gcgctttggccgtgacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataaat                                                                                                                                     >  1:561838‑M1/127‑143 (MQ=255)
             ttttgccgttacgcaccacaccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCt                                                                                                                                 <  1:547069‑M1/21‑1 (MQ=255)
              tGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaa                                                                                                                                >  1:49754‑M2/1‑129 (MQ=255)
                 gccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTc                                                                                                                             >  2:492022‑M1/119‑143 (MQ=255)
                 gccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTc                                                                                                                             <  1:739234‑M1/25‑1 (MQ=255)
                   cGCTCATTGTAGAAATCGCAAACTGATAGTGGGGTGGTTTGTTGAGGTAATAAGAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttat                                                                                                                           >  1:817948‑M2/1‑124 (MQ=255)
                   cGCTCATTGGAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttat                                                                                                                           >  2:351635‑M2/1‑124 (MQ=255)
                     ttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcttacactaaatcagtaaggtggcagcatcaccTTGTGCCGCCAATAAATATCTGTTCAtac                                                                                                                         <  1:808977‑M1/29‑2 (MQ=255)
                     ttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCACTAAATATCTTTTCATaa                                                                                                                         <  1:279781‑M1/29‑1 (MQ=255)
                          tGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagt                                                                                                                    >  1:511467‑M2/1‑117 (MQ=255)
                          caccaccccgtcagtagctgaccaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTa                                                                                                                    >  1:596725‑M1/110‑143 (MQ=255)
                           accaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacattaaatcagtcagttggcagcatcaccTTGTGCCGCCAATAAATATCTGTTCATAAAATTAg                                                                                                                   <  1:24988‑M1/35‑1 (MQ=255)
                           accaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATtac                                                                                                                   <  2:202314‑M1/35‑2 (MQ=255)
                            tagtaATGTCAAACTTATATTGTGTTTGTTTGTTGAGTTAATAATAGAGCCTTAAATTCAGTTGTGCTATAGCCAGGAATGTAAGGAATTACCCTGTATTCTTGATTTTGTGCCGggtaatgactccaacttattgatagtgt                                                                                                                  >  2:185014‑M2/1‑115 (MQ=255)
                            tagtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgagagtgt                                                                                                                  <  1:419062‑M2/143‑29 (MQ=255)
                              gtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttt                                                                                                                <  1:373185‑M2/143‑31 (MQ=255)
                              gtaATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttt                                                                                                                >  1:509572‑M2/1‑113 (MQ=255)
                                  cggcagtagctgaaccggagggacaggtgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGaaa                                                                                                            >  1:822537‑M1/102‑143 (MQ=255)
                                    tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtt                                                                                                          <  1:162578‑M2/143‑37 (MQ=255)
                                    tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtt                                                                                                          <  2:324529‑M2/143‑37 (MQ=255)
                                    tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCATTAAATTCAGTTGTGCAATAGACAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCGGggtaatgactccaacttattgatagtgttttatgtt                                                                                                          <  2:542740‑M2/143‑37 (MQ=255)
                                       gtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTGGTGCCCCCAATAAATATCTTTCCAAAAAATTAGccagaaaaaccg                                                                                                       <  2:819807‑M1/47‑5 (MQ=255)
                                         ctttgatggggtTGGTTTGTTGAGGTAATTATAGAGTCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagat                                                                                                     >  2:605992‑M2/6‑102 (MQ=255)
                                              aacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCata                                                                                                <  2:198632‑M1/54‑1 (MQ=255)
                                               ttGGGGTGGTTTGCTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcc                                                                                               >  2:629092‑M2/1‑96 (MQ=255)
                                                 aggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCACATAg                                                                                             <  2:65670‑M1/57‑1 (MQ=255)
                                                  gggTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccga                                                                                            >  1:861181‑M2/1‑93 (MQ=255)
                                                     tggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatga                                                                                         >  1:755157‑M2/1‑90 (MQ=255)
                                                         cagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAgccctgtgt                                                                                     <  1:335031‑M1/65‑5 (MQ=255)
                                                         cagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCGAttt                                                                                     <  1:331143‑M1/65‑1 (MQ=255)
                                                             tggtagaagcagaagccactggagcacctcacctacaccatcatacactaaatcagtaagtgggcagcatcaccGTGTGCCGCGAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTacac                                                                                 >  2:606121‑M1/75‑143 (MQ=255)
                                                             ggatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTacac                                                                                 >  1:437766‑M1/75‑143 (MQ=255)
                                                              gatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACAcc                                                                                <  2:137700‑M1/70‑1 (MQ=255)
                                                               atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCg                                                                               <  1:82649‑M1/71‑1 (MQ=255)
                                                               aGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg                                                                               >  1:59842‑M2/1‑80 (MQ=255)
                                                                 gTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgca                                                                             <  1:47550‑M2/143‑66 (MQ=255)
                                                                 gTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATCCGGGTCGGggtaatgactccaacttattgatcgtgttttatgttcagataatgcccgatgcctttgtgctgca                                                                             <  2:751816‑M2/143‑66 (MQ=255)
                                                                   aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCgatga                                                                           <  1:832840‑M1/75‑1 (MQ=255)
                                                                      aataGAGCTTTAAATGCAGTTGTGCAATAGCGAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGGTCCGggtaatgattccaacttattgatagtgttttatgttcagataaggcccgatgactttgtcatgcagctcc                                                                        >  1:140952‑M2/1‑73 (MQ=255)
                                                                      aataGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactctgccaggcagctca                                                                        <  2:511723‑M2/143‑71 (MQ=255)
                                                                         aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATCAATATCTTTTCATAAAATTAGCCAGAAAAGAAGCGGCATATACCCCCATTTACGCCGCTCATTTCgc                                                                     <  2:329204‑M1/81‑1 (MQ=255)
                                                                           gccactggagcacatcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTACgcag                                                                   <  2:527037‑M1/83‑1 (MQ=255)
                                                                            ccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGGCAATAAATATCTGTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgcagc                                                                  <  1:725528‑M1/84‑1 (MQ=255)
                                                                              gcgggagcacctcaacaacaccatcatacactaaatcagtaagttggcagcatcaccTCGAGCCGCCAAGAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCAc                                                                >  2:414961‑M1/58‑143 (MQ=255)
                                                                               ttAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcaaccgatttt                                                               <  1:416008‑M2/143‑80 (MQ=255)
                                                                               ttAAATGCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt                                                               >  1:222699‑M2/1‑64 (MQ=255)
                                                                                    ttCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgccgctccaccgattttgacaa                                                          <  1:78356‑M2/143‑85 (MQ=255)
                                                                                       aGTTGTGCAATAGCGAGGAATGTAAGGAATTCAAAATTGTTCTTGATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacga                                                       >  2:610463‑M2/1‑56 (MQ=255)
                                                                                        ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaa                                                      <  1:321103‑M1/96‑1 (MQ=255)
                                                                                         tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTaaa                                                     >  1:862354‑M1/47‑143 (MQ=255)
                                                                                             aaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACtt                                                 <  1:64296‑M1/101‑1 (MQ=255)
                                                                                               aaTAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcaactccaccgattttgagaacgacaacgacg                                               <  2:43904‑M2/143‑96 (MQ=255)
                                                                                                 tAGCCAGGAATGTAAGCAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttc                                             >  1:116842‑M2/1‑46 (MQ=255)
                                                                                                  ccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGa                                            >  2:321103‑M1/38‑143 (MQ=255)
                                                                                                     cAGGAATGTAAGGAATTCAAAAGTGTTCTTTATTTTGTGCCGggtaatgactccaacatctacatagtggtttatggtcagataatgcccgatgactttgtaatgcggctccacagattttgaaaacgacagcgaattccgtc                                         <  2:167971‑M2/143‑102 (MQ=255)
                                                                                                      aGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgacaccaactgattgttagtgttgtatgtgcagataatgcccgatgactttgtcacgcatctccaccgactttgagaccgacagcgacttccgtcc                                        <  2:521935‑M2/143‑103 (MQ=255)
                                                                                                       ggAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccc                                       >  1:92080‑M2/1‑40 (MQ=255)
                                                                                                          aTGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagc                                    >  2:151747‑M2/1‑37 (MQ=255)
                                                                                                           actaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTca                                   <  1:799362‑M1/115‑1 (MQ=255)
                                                                                                             tAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGgagaaggactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagcttcaccgattttgagaacgacagcgacttccggccccgccgt                                 <  2:476698‑M2/143‑110 (MQ=255)
                                                                                                               aatcagtacgtggtccgcatcaccTTGTGCCGCCAATTACTACTTTTTCATAAACTTAGCCAGAAAAGCCGCGGCATACAGCCCTATTTACACCGATGATTTCGCATCACGTGAGGTTAAAACTTCCTGATTCATGTCACAtt                               >  1:848724‑M1/25‑143 (MQ=255)
                                                                                                               aatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACAtt                               >  1:148726‑M1/25‑143 (MQ=255)
                                                                                                               aGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccacctattttgagaacgacagcgacttccggagcagccgtgc                               <  2:333373‑M2/143‑112 (MQ=255)
                                                                                                                 tcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAACACTTCCTGATTCATGTCACAtttt                             <  1:618511‑M1/121‑1 (MQ=255)
                                                                                                                 gAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccccgccgtgcca                             <  1:512769‑M2/143‑114 (MQ=255)
                                                                                                                  aaTTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgccagcgacttccgtcccagccgtggcag                            <  2:815341‑M2/143‑115 (MQ=255)
                                                                                                                   aTTCATAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccagg                           >  2:475604‑M2/1‑28 (MQ=255)
                                                                                                                    gtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAATAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATg                          >  2:809070‑M1/20‑143 (MQ=255)
                                                                                                                    gtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATg                          <  1:487439‑M1/124‑1 (MQ=255)
                                                                                                                     taagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATgg                         >  1:116357‑M1/19‑143 (MQ=255)
                                                                                                                     tCAAGATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtg                         >  1:576953‑M2/1‑26 (MQ=255)
                                                                                                                            tGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctc                  >  2:330749‑M2/1‑19 (MQ=255)
                                                                                                                             cagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTa                 <  2:827844‑M1/133‑1 (MQ=255)
                                                                                                                               cctTTAGTTTGTGCCGgttaatgcctccacctgattgttagtgttttatgttcagataatgcccgatggctttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcaga               >  2:158596‑M2/2‑16 (MQ=255)
                                                                                                                                  ttATTTTGTGCCGggtaatgactccaacttattgatattgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgagtttgcggacgacagcgacttccgtcccggccgggccgggcgcgccctcagctcc            <  2:409132‑M2/143‑131 (MQ=255)
                                                                                                                                   tATTTTGGGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattca           >  2:620558‑M2/1‑12 (MQ=255)
                                                                                                                                    accTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAgg          <  2:281950‑M1/140‑1 (MQ=255)
                                                                                                                                     ccTTGTGCCGCGAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGc         >  2:697043‑M1/3‑143 (MQ=255)
                                                                                                                                         gtgCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTGACACCGATGATTTCGCAGCACGTGAGGCTAAAACTTCATGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCCgac     >  2:420351/1‑143 (MQ=255)
                                                                                                                                          tgCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTgacg    >  1:229627/1‑143 (MQ=255)
                                                                                                                                            ccgccAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATAGTAGGCTgacgac  >  2:536211/1‑143 (MQ=255)
                                                                                                                                              |                                                                                                                                            
TTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGAC  >  NC_000913/1292897‑1293179

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.