New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1207790 =8 (0.160)35 (0.800) 31/252 0.4 82.3% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913 1209619 = 8 (0.180)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

GTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCT  >  NC_000913/1207648‑1207929
                                                                                                                                              |                                                                                                                                            
ctggtggaGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCT                                                                                                                                              <  1:138752‑M1/142‑1 (MQ=255)
  ggcggaggGATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTG                                                                                                                                            <  1:182314‑M1/140‑1 (MQ=255)
   gtggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTGGAAAACCGTGG                                                                                                                                           >  1:77199‑M1/1‑143 (MQ=255)
   cacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTgg                                                                                                                                           >  1:54282‑M1/140‑143 (MQ=255)
    tggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGACAGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGT                                                                                                                                          >  1:658527‑M1/1‑143 (MQ=255)
    acagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGt                                                                                                                                          <  1:92795‑M1/5‑1 (MQ=255)
      gAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGCTTGGCGATCTCAAATCGGATGGCACTGTGCACACGGCTATCGCACACCCTGGGTT                                                                                                                                        >  2:166575‑M1/1‑143 (MQ=255)
      agttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcctgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGttt                                                                                                                                        >  1:474903‑M1/137‑143 (MQ=255)
      agttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGttt                                                                                                                                        >  1:745809‑M1/137‑143 (MQ=255)
        ttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTgg                                                                                                                                      <  1:581229‑M1/9‑1 (MQ=255)
        ctcatCCGGCTCCACCCTGGAGGAGGGGCCGCACTACCAGTTACTTACCGCACTTCCCGCGCTGCTGTTAAGTCGCAAGAATCCCTTTGGCGATATCAAATCGGATGGCACTGTGCAAATGGCTCTCGAAAACCTTGGTTTGG                                                                                                                                      <  2:811070‑M1/141‑1 (MQ=255)
          cATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGA                                                                                                                                    <  1:88213‑M1/143‑1 (MQ=255)
             cgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacagagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGaa                                                                                                                                 >  2:761892‑M1/130‑143 (MQ=255)
              gcaacccgctgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAg                                                                                                                                >  1:802612‑M1/129‑143 (MQ=255)
               ggTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGG                                                                                                                               <  1:619926‑M1/143‑1 (MQ=255)
                gTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGGCGCAAGAATCCGTTTGGCGATATCAAATCGGATCGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGGAGGc                                                                                                                              >  2:249660‑M1/1‑142 (MQ=255)
                   tggttgtagatctgaggtctggtcgtttgttgatacgcgtacatagccaataagcatgttaaatccacctggtaaaagcaggaatgatgccatttgcttgttatgtcttcattttcataaacgTTGGTTTGGGAGAAGGAGCa                                                                                                                           >  2:218542‑M1/124‑143 (MQ=255)
                          gtagaagGGGCGGCACGACCAGTTACTGACCGCACTTCGCGCGCTGCGGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattac                                                                                                                    <  1:248639‑M1/141‑12 (MQ=255)
                           gttctgtgttctggtcgtttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCaa                                                                                                                   >  2:423296‑M1/116‑143 (MQ=255)
                              aaGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgt                                                                                                                <  1:4727‑M1/143‑16 (MQ=255)
                                gtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTCTGGGAGTAGGAGCAAAACTCAATgcag                                                                                                              <  2:416876‑M1/33‑1 (MQ=255)
                                ggggggGCACGACCAGTTACTTGCCGCACTTCGCGCGCTGCTGTTAAGCCGGAAGAAGCCGTTTGGCGAGATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgcag                                                                                                              <  2:166560/143‑1 (MQ=21)
                                ggggCGGCCCGACCCGTTATTTCCCGCCCTGCGGGCGCTGCTGGTACGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATgcag                                                                                                              <  2:22469/143‑1 (MQ=18)
                                ggggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattgcctgttg                                                                                                              <  1:768928‑M1/143‑18 (MQ=255)
                                      tggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACgg                                                                                                       <  1:154631‑M1/39‑1 (MQ=255)
                                      tcaCGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcc                                                                                                        <  2:60938‑M1/142‑24 (MQ=255)
                                      gcAGGACCAGTTACTTCCCGCACTCCGCGCGTTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcc                                                                                                        <  1:390986‑M1/143‑24 (MQ=255)
                                       ggtcatttgttgatacgcgtacatagccaataagcatgttaaatcctcctggtaaaagcaggaatgatgccatttgcttgttatttcttcgttttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGc                                                                                                      >  2:649380‑M1/104‑143 (MQ=255)
                                        gtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCt                                                                                                     <  1:14479‑M1/41‑1 (MQ=255)
                                         tcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTa                                                                                                    <  1:71149‑M1/42‑1 (MQ=255)
                                            tttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttctccattttcataaacgTCGGTTTGGTAGAAGGAGCAAAACTCAATGCAGCACCGGCTACAt                                                                                                 <  2:504897‑M1/45‑1 (MQ=255)
                                              tgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTa                                                                                               >  1:765098‑M1/97‑143 (MQ=255)
                                              aGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGTAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccg                                                                                                <  2:427269‑M1/143‑32 (MQ=255)
                                              aGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGGTTGGGCGCAGGctctgcattccccgctggtgtccaggttccg                                                                                                >  2:379353‑M1/1‑112 (MQ=255)
                                                ttgatactcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAgg                                                                                             >  1:94387‑M1/95‑143 (MQ=255)
                                                   atacgcgtacatagccaataagcatgttaaatccccctggtaaaagcagcaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACg                                                                                          >  1:21262‑M1/92‑143 (MQ=255)
                                                   atacgcgcacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttctttcttcatttgcatatacgTTTGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACg                                                                                          >  1:341440‑M1/92‑143 (MQ=255)
                                                     tacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcctt                                                                                         <  1:221350‑M1/143‑39 (MQ=255)
                                                      cgcgtacatagccaataagcatgttaaatccccctggtcaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGCGCGTAACTCAATGCAGCAACGGCTACCTTAGGACGCAc                                                                                       <  2:186190‑M1/55‑1 (MQ=255)
                                                        cGCACCTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcag                                                                                      <  1:596661‑M1/143‑42 (MQ=255)
                                                         gCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACAgg                                                                                    >  2:119108/1‑143 (MQ=255)
                                                         gCACCTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagc                                                                                     <  1:251543‑M1/143‑43 (MQ=255)
                                                          cACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagcc                                                                                    >  1:490635‑M1/1‑100 (MQ=255)
                                                             ttggcgcgctgcTGGTAAGCCGGAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGACAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccact                                                                                 <  2:798284‑M1/140‑47 (MQ=255)
                                                               cgcgcgCTGCTGTTAAGCCGCAAGAAGCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCAt                                                                              <  1:247923/143‑1 (MQ=255)
                                                                gctaaaaagcatgttaaatgcccctggtaaaagcaggaatgatgccatttgcttgttatttcttcagtttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATa                                                                             >  2:40197‑M1/79‑143 (MQ=255)
                                                                gcgcgcTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccg                                                                              >  1:181637‑M1/1‑94 (MQ=255)
                                                                 cgcgcTGCTGTTAGGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAACCTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAg                                                                            <  2:896266/143‑1 (MQ=255)
                                                                 cgcgcTGCCGTTAGGCCGCAGGAATCCGTTTGGCGATATCGAGGCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgc                                                                             <  2:258472‑M1/143‑51 (MQ=255)
                                                                   aataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATCGCt                                                                          <  1:382533‑M1/68‑1 (MQ=255)
                                                                   aataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCt                                                                          <  1:777297‑M1/68‑1 (MQ=255)
                                                                      tgctgTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccatca                                                                        >  1:306007‑M1/1‑88 (MQ=255)
                                                                        ctgTGAAGCCGCAAGACTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacagg                                                                      <  2:658527‑M1/143‑58 (MQ=255)
                                                                          atgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgATGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCgg                                                                   <  1:435200‑M1/75‑1 (MQ=255)
                                                                              aGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggct                                                                >  1:831730‑M1/1‑80 (MQ=255)
                                                                               aaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATg                                                              >  1:722454‑M1/64‑143 (MQ=255)
                                                                                 atccccctggtaaaagcaggaatgatgccatttgcttgtcatttcttcattttcatagacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCAGCGGTTTCATAGCTATACCGGTTATGAt                                                            <  2:681104‑M1/82‑1 (MQ=255)
                                                                                  tccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAtt                                                           >  2:92795‑M1/61‑143 (MQ=255)
                                                                                  tccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGGTTCATAGCTATACCGGTgatgcgt                                                           <  1:69233‑M1/83‑4 (MQ=255)
                                                                                    aaGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTCGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggcaggccgaaacg                                                          >  2:381484‑M1/1‑74 (MQ=255)
                                                                                     ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                        >  1:605066‑M1/58‑143 (MQ=255)
                                                                                     aGAATCGGTTTGGCGATATGAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                        <  1:893243/143‑1 (MQ=255)
                                                                                        aTCCGTGTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaat                                                      <  2:251820‑M1/143‑74 (MQ=255)
                                                                                         tCCGTTTGGCGATATCAAATCGGATGGCACTGTGCACACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgacatgcaatg                                                     >  2:791716‑M1/1‑69 (MQ=255)
                                                                                          ggcaaagcaggaaggatgccgtttgcttgttatgtcttcatgttcataaacgTTGGTTTGGGAGAAGGAGCAGAACTCAATGCAGCACCGGCTACATTAGGACGCACCGGTTTCATAGCTAGACCGGTTATGAttggtggtgt                                                   >  2:256599‑M1/53‑141 (MQ=255)
                                                                                             tttGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggcggaaatgccatggcgc                                                 >  1:482060‑M1/1‑65 (MQ=255)
                                                                                              ttGGCGATATCAAAGCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTGGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgcc                                                <  1:573566‑M1/143‑80 (MQ=255)
                                                                                               tGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCGTGGTTTGGGAGAAGGctctgcattacctgttggtgtctcggttccgtggccttgagcccctccgccaacaggctggctacaatgcaaaggccacc                                               >  2:321866‑M1/1‑63 (MQ=255)
                                                                                                   ggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTCTTGATCAata                                          <  2:287109‑M1/100‑2 (MQ=255)
                                                                                                    gaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGAAGCACCTGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCa                                         >  1:620943‑M1/43‑143 (MQ=255)
                                                                                                       tgatgccatttgcttgtgatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCTGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTa                                      >  2:181326‑M1/40‑143 (MQ=255)
                                                                                                       tCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAGTCAGTa                                      >  1:311452/1‑143 (MQ=255)
                                                                                                          aaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcaggcactccgccaacaggctggctgaaatgcaatggtgccactttttctgct                                    >  2:6164‑M1/1‑52 (MQ=255)
                                                                                                          aaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgct                                    >  1:3488‑M1/1‑52 (MQ=255)
                                                                                                          aaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGActctgcattacctgttggtggcccggttccgtcgccttcagccactccgccaacaggccggctgaaatgcaatggtgccgcgtttactgct                                    >  2:2455‑M1/1‑52 (MQ=255)
                                                                                                              ggAAGGCACTGGGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtggcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaag                                <  1:451232‑M1/143‑96 (MQ=255)
                                                                                                                    cACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacc                          <  1:474912‑M1/143‑102 (MQ=255)
                                                                                                                     tgttatgtcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgggg                        >  1:534042‑M1/26‑143 (MQ=255)
                                                                                                                      gttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATCGCGATACCGGTCATGATTGGTCGTATTGAGCAATCAGTAATCATTCAGTggggg                       <  2:130455‑M1/119‑1 (MQ=255)
                                                                                                                       ttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGt                      <  2:380627‑M1/120‑1 (MQ=255)
                                                                                                                       ttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTAAATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTGAGTGGGGGt                      <  1:153256‑M1/120‑1 (MQ=255)
                                                                                                                           cAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaact                   >  1:800145‑M1/1‑35 (MQ=255)
                                                                                                                            aaaCGGCTCTCGACAACCTTGGTTCGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactg                  <  2:675311‑M1/143‑110 (MQ=255)
                                                                                                                              ttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGGTTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGGATGc               <  1:427241‑M1/127‑1 (MQ=255)
                                                                                                                              aCGGCTCTCGAAATCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggc                <  2:531691‑M1/143‑112 (MQ=255)
                                                                                                                               tcatgttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGACGAGGCCTATCAAGGACTCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGcc              >  1:416876‑M1/16‑143 (MQ=255)
                                                                                                                                   tttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGCGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaa          <  1:614300‑M1/132‑1 (MQ=255)
                                                                                                                                   tctgtaaacccttgGTGTGGGAGAAGGctctgcattacctgttggtggcccggttccggggccgtcagccacgccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaagg           <  1:607540‑M1/138‑117 (MQ=255)
                                                                                                                                   tctcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtagccttcagccactccgccaacaggcaggctgaaatgccatggtgccgctttggctgcagaagaatacccggacatggcaaagg           >  2:468458‑M1/1‑27 (MQ=255)
                                                                                                                                   tctcGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGGGGAATGCCGCaa          >  1:511146/1‑143 (MQ=255)
                                                                                                                                     tcGAAGACCTTGGTGTGGGAGACGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggct         <  2:503437‑M1/143‑119 (MQ=255)
                                                                                                                                     tcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggcactggcaaaggct         >  1:396785‑M1/1‑25 (MQ=255)
                                                                                                                                     tcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacacgctggctgaaatgcaatggtcccgcttttcctgctgaagaatccccggaacaggcaaaagct         >  1:61059‑M1/1‑25 (MQ=255)
                                                                                                                                       ataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAGTACTTCAGTGGTGGTGGAATGCCGCAAAAGc      <  1:564237‑M1/136‑1 (MQ=255)
                                                                                                                                         aaaCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatc     >  1:574227‑M1/1‑21 (MQ=255)
                                                                                                                                           acgTGGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCt  >  1:192723‑M1/4‑143 (MQ=255)
                                                                                                                                              |                                                                                                                                            
GTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCT  >  NC_000913/1207648‑1207929

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.