Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,293,032 IS1 (–) +8 bp intergenic (‑110/‑488) hns ← / → tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 257908 =NA (NA)44 (0.890) 36/284 0.4 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 1293039 0 (0.000)intergenic (‑117/‑488) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
* ? NC_000913 1293032 =0 (0.000)55 (1.110) 43/284 0.1 100% intergenic (‑110/‑495) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 1979270 NA (NA)noncoding (1/768 nt) IS1 repeat region

Only 100 of 104 total aligned reads displayed.

ATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTG  >  NC_000913/1292891‑1293174
                                                                                                                                             |                                                                                                                                              
cgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagagacagaagccactggagcacctcaaaaacacaatcatacactaaatcagtaagttggcagcatcacctt                                                                                                                                               <  1:257030‑M1/2‑1 (MQ=255)
cgcggatggccggcggtgctttcgccgttacgcaccactgttgcagtagctgaacaggagggacggctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcacctt                                                                                                                                               >  2:730591‑M1/142‑143 (MQ=255)
 gctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTtg                                                                                                                                              <  2:19036‑M1/3‑1 (MQ=255)
  gttgttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGTTAATAATAGAGCTTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTtgt                                                                                                                                             <  1:419001/143‑1 (MQ=255)
  gttgttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTtgt                                                                                                                                             <  1:908169/143‑1 (MQ=255)
  gttgttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTtgt                                                                                                                                             <  1:544161/143‑1 (MQ=255)
     gttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTgcc                                                                                                                                          >  1:37386/1‑143 (MQ=255)
     atgtccggcggtgcttttgcagttacgcacctccccgtcagtagctgcacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTgcc                                                                                                                                          >  2:456394‑M1/137‑143 (MQ=255)
      tgcAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTgtcg                                                                                                                                         <  2:868545/141‑1 (MQ=255)
       ttatatatttaactgctTCGTTCTTTTTAGCAATCTCTAACTTATATTGGGGGTGTTTGCTGAGGTAATAATAGAGCCTTAAATTCAGTTGTTCTATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGg                                                                                                                                        >  2:33979‑M2/8‑142 (MQ=255)
       tCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGg                                                                                                                                        <  2:490176‑M2/143‑2 (MQ=255)
       gagaggcggtggttttggcgaaacgcgccaccccgtcagtagcggaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTgccgc                                                                                                                                        >  1:671380‑M1/135‑143 (MQ=255)
        cAGAATTTTAAGCGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGCGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGgg                                                                                                                                       <  2:46914‑M2/143‑3 (MQ=255)
         aGTATTTTAAGTGCTTTGCTCATTGTAGTATTCTCTAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggt                                                                                                                                      >  1:74745‑M2/1‑140 (MQ=255)
         aGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAGATTGTTCTTTATTTTGTGCAGggt                                                                                                                                      <  1:486022‑M2/143‑4 (MQ=255)
         aGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggt                                                                                                                                      <  2:220859‑M2/143‑4 (MQ=255)
         aGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggt                                                                                                                                      <  1:150675‑M2/143‑4 (MQ=255)
            aTTTTATGTGCTTCACTCATTGTAGTAATCTCAAACTTTTATTGGGGTGGTTTATAAAGGTAATAATATAGAATTAAATTCAGTTGCGCATTAGCCAGAAATGAAAAGATTGCAAAATTGTTCTTTATTTTGTgccgggtaat                                                                                                                                   <  2:153603/143‑7 (MQ=255)
               gtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataaat                                                                                                                                <  1:566083‑M1/17‑1 (MQ=255)
                gcagtCCGTCGGTCTTTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTGGAGGTAATAATAGAGCCTTATATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgact                                                                                                                               >  2:386713‑M2/3‑133 (MQ=255)
                 gcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAatat                                                                                                                              <  1:884472‑M1/19‑1 (MQ=255)
                 gctttcgccggcacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAatat                                                                                                                              >  1:161084‑M1/125‑143 (MQ=255)
                   ttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCAGCCAATAAATATCt                                                                                                                            <  1:139300‑M1/21‑1 (MQ=255)
                    tGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCGGggtgctgacgccaa                                                                                                                           <  1:20309‑M2/143‑15 (MQ=255)
                     ttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacacgaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCttt                                                                                                                          >  1:763284‑M1/121‑143 (MQ=255)
                          gttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAGTAAATGTCTTTTCatc                                                                                                                     <  1:263511‑M1/28‑2 (MQ=255)
                                tGTAGTAATCTCAAACTTATATTGGGGAGGTTGGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagt                                                                                                               <  1:668995‑M2/143‑27 (MQ=255)
                                       ccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGaa                                                                                                        <  1:544679‑M1/41‑1 (MQ=255)
                                       ccgtcagtagccgaacaggagggacagcttatagaaacagaagccattggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGaa                                                                                                        >  2:233452‑M1/103‑143 (MQ=255)
                                              cagctgaacaggagggacagatgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAcgc                                                                                                 >  1:281524‑M1/96‑143 (MQ=255)
                                                ttATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagata                                                                                               <  2:799234‑M2/143‑43 (MQ=255)
                                                    tctgtggtGGTTTGTTGAGGTAATAATAGGGCATGAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGGCGggtaatgactccaacttattgatagtgttttatgttcagataatgc                                                                                           >  2:692462‑M2/3‑97 (MQ=255)
                                                     acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtacgctggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATCAAATTACCCAGAACAGCCGCGgcatct                                                                                          <  2:868641‑M1/55‑3 (MQ=255)
                                                      caggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCAtata                                                                                         <  2:297881‑M1/56‑1 (MQ=255)
                                                       aggagggacagctgatagaaacagaatcccctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAg                                                                                        >  1:51472‑M1/87‑143 (MQ=255)
                                                         ggtggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgat                                                                                      >  1:585787‑M2/1‑92 (MQ=255)
                                                         ggtggtTTGTTAAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgat                                                                                      >  1:72587‑M2/1‑92 (MQ=255)
                                                            ggtcagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagctggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATACAATTAACCAGAAACAACGCGGCATCTAGCCCTa                                                                                   <  2:500384‑M1/62‑1 (MQ=255)
                                                             gtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatcgtgttttatgttcagataatgcccgatgact                                                                                  <  2:663382‑M2/143‑56 (MQ=255)
                                                              tttGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactt                                                                                 <  1:167270‑M2/143‑57 (MQ=255)
                                                              agagctgatagaaacagaagccactggagcacctcaagaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAtt                                                                                 >  1:501593‑M1/80‑143 (MQ=255)
                                                                tgttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttg                                                                               <  2:592869‑M2/143‑59 (MQ=255)
                                                                  ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATCTCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTaca                                                                             <  2:122448‑M1/68‑1 (MQ=255)
                                                                  ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTaca                                                                             <  1:480251‑M1/68‑1 (MQ=255)
                                                                   tgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca                                                                            >  1:872587‑M2/1‑82 (MQ=255)
                                                                            aataGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGTCTgttaattattccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcc                                                                   >  1:265831‑M2/1‑73 (MQ=255)
                                                                             ataGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcca                                                                  >  1:175358‑M2/1‑72 (MQ=255)
                                                                              taGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac                                                                 <  1:505313‑M2/143‑73 (MQ=255)
                                                                                agccactggagcacctcaaaaacaccatcatacactaactcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgca                                                               >  1:610099‑M1/62‑143 (MQ=255)
                                                                                 gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTAACACCGATGATTTCgcag                                                              <  2:429553‑M1/83‑1 (MQ=255)
                                                                                     ctggagcacctcaaatacaccatcgtacactaaatcagtaagttggcagcatcaccTTGTGCTGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACg                                                          >  2:4091‑M1/57‑143 (MQ=255)
                                                                                      tggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGt                                                         >  1:658077‑M1/56‑143 (MQ=255)
                                                                                        acgaacctcatatacaccatcatacactccatcagtaagtttgcagcaccaccTTTTGCCGCCAATAAATATCTTCTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATCTACACCGATGATTTCGCAGCACGTGa                                                       >  1:265053‑M1/54‑143 (MQ=255)
                                                                                          gcacctcaaaaacaccatcatacactaaatcaataagtaggcaacatcaccTTGTGCCGCCAATAAATATCTTTGCATAAAATTAGCCAGAAACGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAgg                                                     <  2:886800‑M1/92‑1 (MQ=255)
                                                                                           tCAGTGGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaac                                                    >  1:598613‑M2/1‑58 (MQ=255)
                                                                                           cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGt                                                    <  1:99704‑M1/93‑1 (MQ=255)
                                                                                               ttGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaca                                                >  2:18010‑M2/1‑54 (MQ=255)
                                                                                                 gtgCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagcacgacagc                                              <  1:680107‑M2/143‑92 (MQ=255)
                                                                                                 ggtcaatAGCCAGGCATGTAATGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagc                                              >  2:757046‑M2/4‑52 (MQ=255)
                                                                                                 aaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATGTCGCAGCACGTGAGGTTAAAAc                                              <  2:763701‑M1/99‑1 (MQ=255)
                                                                                                    gacgccatcgtacactaaatcagtaagttggcagcatgaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTc                                           >  2:530998‑M1/42‑143 (MQ=255)
                                                                                                    aacaccatcatacactaaatcagtaagttggcagcatcaccTGGAGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTc                                           >  1:19036‑M1/42‑143 (MQ=255)
                                                                                                      caccgtcatacgcgacatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCt                                         >  2:328717‑M1/40‑143 (MQ=255)
                                                                                                       tAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaactaaataaaagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgagtttgaaaacgacagcgacttc                                        <  1:357650‑M2/143‑98 (MQ=255)
                                                                                                         catcatcccctcaatcagtacgttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGAt                                      >  2:817933‑M1/37‑143 (MQ=255)
                                                                                                         catcatacactaaatcagtaagttgacagcatcaccTTGTGCCGCCAATAAATATCTTTGCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCATATTTACACAGAGAATTTCACAGCACGTAGGGTTAAAAATTCATgac                                      <  2:229764‑M1/107‑2 (MQ=255)
                                                                                                          atcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGAtt                                     >  1:857172‑M1/36‑143 (MQ=255)
                                                                                                               acactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGt                                <  1:497724‑M1/113‑1 (MQ=255)
                                                                                                                tcttaattcagtaagttggcagcatcaccTTGGGAGGCAAATAAATAGCTGTTCATAAAATTAGACAGAAAAGACGCGGTATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTc                               >  1:514249‑M1/30‑143 (MQ=255)
                                                                                                                 actaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTca                              <  1:629617‑M1/115‑1 (MQ=255)
                                                                                                                 actaaatcagtaagttggcagcatcaccTTGTGAAGAAAAAAAACACCTTTTCATAAAATTAGCCAGAAAAGACGCCACAGACAGCCCTATTTACACCGATAATTTCGCAGCACGTGACGTTAAAACTTCCTGATTCATGTca                              <  2:790544‑M1/115‑1 (MQ=255)
                                                                                                                   taaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACAAAAATCCTGGCGCAGCACGTGCGTTTAAAACTTCCTGATTCATGTcaca                            <  1:413341‑M1/117‑1 (MQ=255)
                                                                                                                   tAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgcttttgagaacgaccgcgacttccgtcccagccat                            <  2:313567‑M2/143‑110 (MQ=255)
                                                                                                                   tAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgactttgagcacgacagcgacttccgcccccgccgt                            <  2:497715‑M2/143‑110 (MQ=255)
                                                                                                                     catcagtaagttggcagcatcaccTTGCGCCGCCAATAAATATCTTTTCATAAAATTTGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACAtt                          >  1:241642‑M1/25‑143 (MQ=255)
                                                                                                                     aatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTCTTTACACCGATGATTTCGCAGCACGTAAGGTTAAAACTTCCTGATTCAtgccacctt                          <  1:242881‑M1/119‑4 (MQ=255)
                                                                                                                     aatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGAAGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACatg                          <  1:124592‑M1/119‑2 (MQ=255)
                                                                                                                      ggAATTCAACATTGTTCTTGATTTGGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcc                         >  1:524056‑M2/1‑31 (MQ=255)
                                                                                                                       gAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttgcgtcccagccgtgcca                        <  2:131484‑M2/143‑114 (MQ=255)
                                                                                                                         aTTCACAATTGTGCTTTATTTTTTGTCGtgtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccagg                      >  2:251381‑M2/1‑28 (MQ=255)
                                                                                                                         aTTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagcacaaacgattttgaggccgacagcgtcttccgtcccagccgtgccagg                      <  1:334385‑M2/143‑116 (MQ=255)
                                                                                                                          ttCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagcggtgccaggg                     <  2:215841‑M2/143‑117 (MQ=255)
                                                                                                                          ttCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggt                     >  1:350163‑M2/1‑27 (MQ=255)
                                                                                                                           taagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAGTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATgg                    >  1:3883‑M1/19‑143 (MQ=255)
                                                                                                                           gacgtgggcggcatcgccGTGTGCGGCCGATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATgg                    >  2:133774‑M1/19‑143 (MQ=255)
                                                                                                                            aagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATggg                   >  2:52853‑M1/18‑143 (MQ=255)
                                                                                                                            aagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATggg                   >  1:446125‑M1/18‑143 (MQ=255)
                                                                                                                             aaaaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttcagtcccagccgtgccaggtgct                  <  2:352690‑M2/143‑120 (MQ=255)
                                                                                                                              aaaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctg                 <  1:673962‑M2/143‑121 (MQ=255)
                                                                                                                                tggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGgaga               <  1:268038‑M1/130‑1 (MQ=255)
                                                                                                                                aTTGTTCTTTATTTTGTGTCGggtaatgactccaacttattgatagtgttttatggtcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcc               >  1:48015‑M2/1‑21 (MQ=255)
                                                                                                                                 ttGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcct              >  1:131888‑M2/1‑20 (MQ=255)
                                                                                                                                 ggcagcatcaccTTGAGCCGCCAATAAATATCGTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGAt              >  1:279131‑M1/13‑143 (MQ=255)
                                                                                                                                  gcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGAtt             <  1:727810‑M1/132‑1 (MQ=255)
                                                                                                                                  gcagcatcaccTTGTGCCGCCAATAAAGATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTCTATGGGGAGAtt             <  2:795114‑M1/132‑1 (MQ=255)
                                                                                                                                    ttCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcag           >  2:668995‑M2/1‑17 (MQ=255)
                                                                                                                                       tttATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagatt        <  1:907774‑M2/143‑130 (MQ=255)
                                                                                                                                       atcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGt        <  1:256800‑M1/137‑1 (MQ=255)
                                                                                                                                           ttttGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcagg    >  1:490176‑M2/1‑10 (MQ=255)
                                                                                                                                             ttGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggtt  >  1:138548‑M2/1‑8 (MQ=255)
                                                                                                                                             |                                                                                                                                              
ATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTG  >  NC_000913/1292891‑1293174

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.