| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,909,312 | Δ774 bp | [pstA]–[pstC] | [pstA], [pstC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3909312 | 3910085 | 774 | 48 [0] | [0] 48 | [pstA]–[pstC] | [pstA],[pstC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3909311 | 0 (0.000) | 46 (0.950) | 40/268 | 0.2 | 100% | coding (129/891 nt) | pstA | phosphate ABC transporter permease |
| ? | NC_000913 | 3910086 = | 0 (0.000) | coding (313/960 nt) | pstC | phosphate ABC transporter permease | |||||
CCCACAAAATTAACAGCCCGCTACCCGCCAGAGCGTTCGCCAGACCACCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3909163‑3909311‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccagGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTC > NC_000913/3910086‑3910225 CCCACAAAATTAACAGCCCGCTACCCGCCAGAGCGTTCGCCAGACCACCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATC > 1:847161/1‑143 CACAAAATTAACAGCCCGCTACCCGCCAGAGCGTTCGCCAGACCACCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTACAATCCAGATCAG > 2:471637/1‑143 CACAAAATTAACAGCCCGCTACCCGCCAGAGCGTTCGCCAGACCACCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTAGACATCAAAATCCAGATCAG > 1:4556/1‑143 AATTAACAGCCCGCTACCCGCCAGAGCGTTCGCCAGACCACCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGACGGGCATCAAACTCCCGATCAGCCAGG > 1:713767/1‑143 ttACAGCCCGCTACCCGCCATAGCGTTCGCCAGACCAGCGCCTTCCGGATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGC < 1:609451/141‑1 CCGCTACCCGCCAGAGCGTTCGCCAGACCACCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGATATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAAGCGAAAGCTCg > 1:466183/1‑142 GAGCGTTCGCCAGACCACCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGG < 1:753444/143‑1 GCCAGACCACCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCG > 1:628390/1‑143 ACCCCCTCCCGTATCGGGCGGCGGCGTCATTGCAGTGACCAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCAC < 2:658207/143‑1 ACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCAC < 1:456732/140‑1 ACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCAC > 2:456732/1‑140 CTTCCGTATTGGGCGGCGGCGTCAGTTCAGGGAGCGGCTCCAGCGACATACCGGCGATACCGCGAGTGATGGTGGACATTAAAAGCCGGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGGAACTCGCCGGGA < 2:621938/143‑1 TTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGAC > 1:93202/1‑143 TTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCGCAGTCAGGACCAGGACGATACCGCACCTCACCGCGAC > 2:649191/1‑143 tccTATTGGGCGGTGGCGTTTTTTTAGTGAGCTGCGCCAGCGACCTACCGTCGATACCGCGAGTGATGTTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTAAAGAACAGGCCTATACCTAAACTCACCGGGACGG < 2:332218/140‑1 GTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCG > 1:909641/1‑143 tagcGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGGCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGA < 1:407049/139‑1 TATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGA > 1:101646/1‑143 atgGGGCGGCGGCGTCATTCCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCTAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAGCTCACCGGGACGGCGAT < 1:484574/140‑1 ATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGAT < 1:623220/143‑1 GGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAG < 1:561916/143‑1 GCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCG < 1:812032/143‑1 GGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCG < 1:473383/143‑1 tggCAGTGAGCAGCGCCAGCGACATACCGGCGATGCCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCAAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTAACCGGGACGGCGATCAGCAGCGCGATAAACG < 2:253131/140‑1 TCAGTGAACAGCGCCAGCGACAGACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAGACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAA < 1:818682/143‑1 GTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAACTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATCGACGAAGTC > 2:756123/1‑143 ttacccGCGCCAGCGACAGACCGGCGATACCGCGATCGAGTGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGTACAGGGCGATATCGAAACTCACCGTGACGGCGATCAGCAGCGCGATAAACGAAGTCA < 1:103759/137‑1 TGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCA < 1:248148/143‑1 AACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCCGGAAGGCGTTCAGCCTCGCGATAAACGAAGTCACC > 1:722260/1‑143 CAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAA > 2:527728/1‑143 AGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAAGGCGATAATTAAACTCACCGGCACGGAGCACAGCAGCGCAAGCAAAGAAGTAACCAAC > 2:107004/1‑143 CCAGCGACATACCGTCGAGACCGCGAGTGAGGGTGGACATTAAAAGCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGACGCACCGCCGCGCGATAAACGAAGTCACCAACGTAC < 2:566187/143‑1 GCGACATACCGCCGATACCGCGAGTGACGGTGGACATTAAAATCCAGTTCAGCCAGCCGCAAGCTCAGTCAGGAACAGGGCGATACCGACACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGT < 1:110940/143‑1 TACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCGCAGTCAGGAACAGTGCGATACCGAAACTCACCGGGACGGCGATCAGCATCGCGATAAACGAAGTCACCGACGTACCGTAGATag > 1:444306/1‑141 ACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGG < 2:101646/143‑1 CCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCTATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGC > 1:567397/1‑143 ATACCGCGAGTGATGGCGGACATTAAAATCCAGAACAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGC > 1:708962/1‑143 CGCGGGGGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCC < 2:470108/143‑1 AGTGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTA < 1:102536/143‑1 TGATGGTGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACGCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACGGTACATCGGCACCAGCGCCCGGTGGA > 2:675023/1‑143 TGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTCGATCGGCACCAGCGCCCCGTAGCTATCGT > 1:181914/1‑143 TGGACATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCAATACCAAAACACACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGT > 1:264276/1‑143 ACATTAGAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCG < 2:901907/143‑1 ccTTAAAATCCAGATCGCCCAGGCGCAGGCGCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGG < 2:131351/141‑1 ATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAA > 2:335040/1‑92 ATTAAAATCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAA < 1:335040/92‑1 ATTAAAACCCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGT < 1:536190/143‑1 CCAGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCA > 1:365145/1‑143 AGATCAGCCAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGCAGTCACCAACGTCGCGTAGATGGGCACCAGCGCCCCGTAGAAATTATTTGGTGCATCacgcg > 1:465988/1‑138 CCAGGCGCACGCCCGGCCAGGAACAGAGCGATACCGTAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGACGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGT < 2:592993/143‑1 CAGGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAACCTCACCCGGGCGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTC < 1:253601/143‑1 CCCACAAAATTAACAGCCCGCTACCCGCCAGAGCGTTCGCCAGACCACCACCTTCCGTATTGGGCGGCGGCGTCATTTCAGTGAACAGCGCCAGCGACATACCGTCGATACCGCGAGTGATGGTGGACATTAAAATCCAGATCAGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3909163‑3909311‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagccagGCGCAAGCTCAGTCAGGAACAGGGCGATACCGAAACTCACCGGGACGGCGATCAGCAGCGCGATAAACGAAGTCACCAACGTACCGTAGATCGGCACCAGCGCCCCGTAGATATCGTTCGGTGCATCCCACTCTTTGGTC > NC_000913/3910086‑3910225 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |