New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 12078055 (0.120)46 (1.240) 39/250 0.0 88.9% coding (305/630 nt) stfP e14 prophage, uncharacterized protein
?NC_000913 = 1209602 7 (0.190)pseudogene (18/501 nt) stfE pseudogene, e14 prophage, side tail fiber protein fragment family,Phage or Prophage Related

GGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGAT  >  NC_000913/1207663‑1207944
                                                                                                                                              |                                                                                                                                           
ggTGCCCGCCTGGCGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGG                                                                                                                                             <  1:263365‑M1/143‑1 (MQ=255)
 attacgttgtaaatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGa                                                                                                                                            >  2:587609‑M1/127‑143 (MQ=255)
  ttacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAg                                                                                                                                           <  2:540115‑M1/18‑1 (MQ=255)
     cAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctg                                                                                                                                        >  2:468701‑M1/1‑138 (MQ=255)
      aGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgc                                                                                                                                       <  1:97330‑M1/143‑7 (MQ=255)
       ttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataagcgTTGGTTTGGGAGAAGGAGCaaaa                                                                                                                                      <  1:454586‑M1/23‑1 (MQ=255)
        tggagatctgtgttctggtcatttgttgctacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAAc                                                                                                                                     >  1:14389‑M1/120‑143 (MQ=255)
               aaGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGAGATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCGTGGTTTGGGAGAAGGctctgcgttacctgt                                                                                                                              >  2:105721‑M1/1‑128 (MQ=255)
                aGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgtt                                                                                                                             <  2:497424‑M1/143‑17 (MQ=255)
                  gggCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTCAGTTTGGGAGAAGGctctgcattacctgttgg                                                                                                                           >  2:494188‑M1/1‑125 (MQ=255)
                   gttctggtcatttgttgatacgagtacatcgccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCTAAACTCAATgcagca                                                                                                                          >  1:617953‑M1/109‑143 (MQ=255)
                   ggcggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggt                                                                                                                          <  2:486195‑M1/143‑20 (MQ=255)
                   gccggcacGACCTGGTACTTACTGGACGTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggt                                                                                                                          <  1:586191‑M1/141‑20 (MQ=255)
                    ttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCaa                                                                                                                         <  2:287957‑M1/36‑1 (MQ=255)
                    gcggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtg                                                                                                                         >  1:181743‑M1/1‑123 (MQ=255)
                     cggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAACTCGGATGGCACTGTGCAAACGGCCCTCGACAACCCCGGTTTGGGAGCAGGctctgcattacctgcaggtgt                                                                                                                        >  2:146566‑M1/1‑122 (MQ=255)
                       tgctcattggttaatacgtgtacagagtcaataagcatgttaaatcccccttgtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGGTTGGGAGAAGGAGCAAAACTCAATGCAGCAACgg                                                                                                                      >  1:467821‑M1/105‑143 (MQ=255)
                       gcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGGGAAGGctctgcattacctgttggtgtcc                                                                                                                      >  2:541419‑M1/1‑120 (MQ=255)
                       gcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCGCGCAAACCATGGTTTAGGAGAAGGctctgcattacctgagggtgtcc                                                                                                                      >  1:589279‑M1/1‑120 (MQ=255)
                         aCGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccg                                                                                                                    <  2:119999‑M1/143‑26 (MQ=255)
                            attggtagacacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACa                                                                                                                 >  2:239480‑M1/100‑143 (MQ=255)
                                gttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttctttcttcattttcataaacgTGGGTTTGGGAGAAGGGGAAAAAATCAATGCAGCAaaggctaactctg                                                                                                             <  1:93111‑M1/48‑7 (MQ=255)
                                 ttgatacgcgtacatatccaatgagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcatgaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAgg                                                                                                            >  1:305959‑M1/95‑143 (MQ=255)
                                 ttgatacgcgtacagagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAgg                                                                                                            >  1:379709‑M1/95‑143 (MQ=255)
                                   gctggacatacttctcgcgCTGCTGGTCAGCCGCAAGGAGCCGTTTGGCGATAGCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAGACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggc                                                                                                          <  1:628216‑M1/134‑36 (MQ=255)
                                   actcacCGCACTTCGCGCGCTGCTATAAAAATTCAATATGCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggc                                                                                                          <  2:691002‑M1/143‑36 (MQ=255)
                                    cttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcc                                                                                                         <  2:266685‑M1/143‑37 (MQ=255)
                                      tacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggcctt                                                                                                       <  2:181743‑M1/143‑39 (MQ=255)
                                          gCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAGTGCAGCAACGGCTACCTTAGGACGCGCCgg                                                                                                   >  2:178366/1‑143 (MQ=255)
                                          gCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCgg                                                                                                   >  2:173888/1‑143 (MQ=255)
                                             catggccgataaccatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGttt                                                                                                >  1:343095‑M1/83‑143 (MQ=255)
                                              ttCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccact                                                                                               >  2:723683‑M1/1‑97 (MQ=255)
                                              ttCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccact                                                                                               >  2:59668‑M1/1‑97 (MQ=255)
                                               tagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgtgatttcttcattttcataaacgTTGGTTTGGGAGAACGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCa                                                                                              <  2:535910‑M1/63‑1 (MQ=255)
                                                cgcgcgcgGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccaatcc                                                                                             <  2:538782‑M1/143‑49 (MQ=255)
                                                cgcgcgCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactcc                                                                                             <  2:538822‑M1/143‑49 (MQ=255)
                                                  ccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGCGCTAAACTCCATGCAGCAACGGCTACATTATGACGCACCGGTTTCATAg                                                                                           <  1:404949‑M1/66‑1 (MQ=255)
                                                   caataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTATGACGcacgggtttttcttt                                                                                          <  2:528730‑M1/67‑7 (MQ=255)
                                                     ataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCta                                                                                        <  2:324410‑M1/69‑1 (MQ=255)
                                                             gttatcaccttgtggtaagatcaggtatgctgccatttgcttgttatttcttcattgtcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGtt                                                                                >  1:343045‑M1/67‑143 (MQ=255)
                                                              ttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgGTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTa                                                                               <  2:460946‑M1/78‑1 (MQ=255)
                                                              aggccGCAAGAATGCGTGTGGCGGTATCACGTCGGAGGGCACTGTGCAACCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggc                                                                               <  1:206382‑M1/141‑63 (MQ=255)
                                                              aaGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggc                                                                               >  2:639873‑M1/1‑81 (MQ=255)
                                                                  cGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttccgccactccgccaacacgctggctgca                                                                           >  1:533666‑M1/1‑77 (MQ=255)
                                                                   gCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaa                                                                          <  2:153370‑M1/143‑68 (MQ=255)
                                                                   gCAAGAAGCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaa                                                                          <  2:174785‑M1/143‑68 (MQ=255)
                                                                    cccccttgtaaaggcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg                                                                         >  1:633734‑M1/60‑143 (MQ=255)
                                                                    cAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttccgcaactccgccaacaggaggggtgacat                                                                         >  1:501512‑M1/1‑75 (MQ=255)
                                                                      ccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtggt                                                                       >  2:324561‑M1/58‑143 (MQ=255)
                                                                        tgtccGTTCGGCGCTAGCGGATGGGATGGCACTGTGCGAACGGCGCTCGAAAACCTTGGTTTGGGAGAAGGctctgcagtacctgttggtgtcccggttccgtggccttcagccactcccccaccaggctggctgaaatgcaa                                                                     <  1:379877‑M1/141‑73 (MQ=255)
                                                                             gTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctatgcattacgtgttggtgtcccggttccgtggccttcagccactccgccaacaagctgccagaaatgcaaaggtg                                                                >  1:71337‑M1/1‑66 (MQ=255)
                                                                             gTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg                                                                <  2:242716/143‑1 (MQ=255)
                                                                             aaaagcaggaatgatgccatttgcttgttatttccgcattttcataaacgGTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTg                                                                >  2:566863‑M1/51‑143 (MQ=255)
                                                                              tttGGCGATATCAAAGCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgc                                                               <  2:392591‑M1/143‑79 (MQ=255)
                                                                              aaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTCTTGa                                                               <  1:60510‑M1/94‑1 (MQ=255)
                                                                                agcaggaatgatgccctttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGc                                                             >  2:454586‑M1/48‑143 (MQ=255)
                                                                                 cgcGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAGCCTTGGTTTGGGAGAGGGctctgcattacctgttggtgtctcggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgc                                                            <  1:361026‑M1/142‑82 (MQ=255)
                                                                                   atgaattatgccagttgcttggtattgcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAAGGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAt                                                          >  2:295156‑M1/45‑143 (MQ=255)
                                                                                     atatCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtgccggttccgtggccttcagccactccgccaacaggcgggctgaaatgcaatggtgccgcttat                                                        >  2:566088‑M1/1‑58 (MQ=255)
                                                                                         gatgccacttgcttgttatttcttcatcttcataaacgTTGGGTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTATGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTaa                                                    >  2:90372‑M1/39‑143 (MQ=255)
                                                                                          aaaTCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgc                                                   >  2:341459‑M1/1‑53 (MQ=255)
                                                                                              cGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacccgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaa                                               <  2:198269‑M1/143‑95 (MQ=255)
                                                                                                gATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGATTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTCTTGGGCAATCAGTAATCATTCa                                             >  2:267969/1‑143 (MQ=255)
                                                                                                    cttgttatttcttcattttcctaaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGTTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgg                                         >  1:451735‑M1/28‑143 (MQ=255)
                                                                                                     ttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCATGCAGTAATCATTCAGTggg                                        <  2:19192‑M1/117‑1 (MQ=255)
                                                                                                     cACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacc                                        >  2:152843‑M1/1‑42 (MQ=255)
                                                                                                       cTGTGCAAACGGCTCTCGAAAACCTTGGTTGGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccg                                      >  2:484808‑M1/1‑40 (MQ=255)
                                                                                                       cTGTGACAACGGCCCGCGAAAACCTTGGTGTGGGAGATGGctctgcagtaccggttggtgtcccggttccgtggccttcagccactccgccaacatgctggctgaaatgcaatggtgccgctttttctgctgaagaatacccg                                      <  2:688852‑M1/143‑104 (MQ=255)
                                                                                                        tgtgCAAACGGCTGTGGGAGCCATTGGTGTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccgg                                     <  1:286292‑M1/143‑105 (MQ=255)
                                                                                                          tgCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccacgccgccaaccggctcgcagaaatgcaatggtgccgccttttctgctgaagaatacacgaaa                                   >  1:350546‑M1/1‑37 (MQ=255)
                                                                                                          tgCAAACGGCGCGCGAAAACCGTGGTTTGGGAGAAGGctctgcaccacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaa                                   <  2:100521‑M1/143‑107 (MQ=255)
                                                                                                            ttttttctttctataaaCGTTGGTTTGGGAGAGGTAGCAAGATTCTATGCTTCAACGTCTATATTAGTACGCATCGGTTTTATAGCTATACCGGTTATGATTGGTGGTATTGAGTAATCAGTAATCATTCAGTGGGGGTGGaa                                 <  1:35597/129‑1 (MQ=255)
                                                                                                             cgacgGCTCGCGAAAACCGTGGTGCGGGAGAAGGctgtgcattccctggtggtgtcccggttccgtggccttcagccaccccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagcatacccggaactg                                <  2:63107‑M1/141‑110 (MQ=255)
                                                                                                             aaaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgacatgccatggcgccgcctttcctgcagaggaatcccccgaagtg                                >  1:730417‑M1/1‑34 (MQ=255)
                                                                                                              aaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccgcaccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactgg                               <  2:657320‑M1/143‑111 (MQ=255)
                                                                                                              aaCGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctatgcattacctgagggtgtcccggttccgtggccttcagcccctgcggcaacaggctggcctaaatgcgatggtgctgctttttctgccgcagaatacccggaactgg                               >  1:294021‑M1/1‑33 (MQ=255)
                                                                                                               ttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGc                              <  1:531538‑M1/127‑1 (MQ=255)
                                                                                                                 ggCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaa                            <  2:322301‑M1/143‑114 (MQ=255)
                                                                                                                 cagtttcatgagcgGTGGTGTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCg                            >  2:83660‑M1/15‑143 (MQ=255)
                                                                                                                      tcataaacgTTTGTTTGGGAGAAGGAGCAATACTTAGTGCAGGAACGGCTACATGAGGACGCACCGGTTTCATAGCTATAACGGTTATGATTGGGGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCaaaa                       >  2:454242‑M1/10‑143 (MQ=255)
                                                                                                                      tcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggcactggcaaaggcc                       >  1:120657‑M1/1‑25 (MQ=255)
                                                                                                                       cataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCcgcaaggg                      <  2:527101‑M1/135‑4 (MQ=255)
                                                                                                                             ccTTGGGTTCGGAGAAGGctctgcattacctgcgtgtggcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccga                <  1:349691‑M1/143‑126 (MQ=255)
                                                                                                                               ttGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagacagcccgtcaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaataccaggaactggcaaaggcttatccgaca              >  2:199432‑M1/1‑16 (MQ=255)
                                                                                                                                tGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaa             <  2:402006‑M1/143‑129 (MQ=255)
                                                                                                                                     tGGGAGGAGGgtctgccttacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaa        <  1:726710‑M1/143‑134 (MQ=255)
                                                                                                                                        gagaAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattg     <  1:59668‑M1/143‑137 (MQ=255)
                                                                                                                                        gagaAGGctcggcattaccggttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattg     <  2:42958‑M1/143‑137 (MQ=255)
                                                                                                                                         agaAGGctctgcattacctgttggtgtcccggttccgtggccgtcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataaattgc    <  1:655549‑M1/143‑138 (MQ=255)
                                                                                                                                           AAGGAGCAAAACTCAATGCAGCAACAGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGAt  <  1:575640‑M1/143‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                           
GGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGGGGGGGAT  >  NC_000913/1207663‑1207944

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.