| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 303629 | 49 (1.170) | 4 (0.110) | 4/256 | 5.3 | 8.3% | intergenic (+24/+224) | yagU/ykgJ | DUF1440 family inner membrane acid resistance protein/UPF0153 cysteine cluster protein |
| ? | NC_000913 | = 303636 | 44 (1.160) | intergenic (+31/+217) | yagU/ykgJ | DUF1440 family inner membrane acid resistance protein/UPF0153 cysteine cluster protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TTGGACATTTAGTCTGGTTCTGGTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAGAGGCATTGTTGCTGGCAAATAGAAGAA > NC_000913/303499‑303774 | ttGGACATTTAGTCTGGTTCTGGTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGcc > 2:5543/1‑143 (MQ=255) gACCTTTAGGTTGGTTCTGGTCCATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTTCTGAGCCAGACCCTGAGATCCCTTTAGGCTCACTCTGTGCATTCATTGATTGATAAAAATGGCGCAAATACAGCGCCAtt < 1:717372/143‑1 (MQ=255) aCATTTAGTCTGGTTCTGGTCTATTGAAATTATTCGCAGAGACTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCAttt < 2:334543/143‑1 (MQ=255) cctaccctggttctggtCTATTGAAATTATTCGCAGAGATTCACGAAACAGAATTACTCATGAGCCAGACCCTGACATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTta < 2:107491/137‑1 (MQ=255) tAGTCTGGTTCTGTTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTtata < 1:83473/143‑1 (MQ=255) gtCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATGGGTTAAAAACAtt > 2:164086/1‑143 (MQ=255) gtCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACAtt > 2:543867/1‑143 (MQ=255) tATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCt < 2:128860/143‑1 (MQ=255) tATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCt < 2:500334/143‑1 (MQ=255) tATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCACTTTTATAGGTTAAAAACATTGCt > 1:630751/1‑143 (MQ=255) tGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCTATTTTTATAGGTTaaaaaaacaaattgt > 2:20560/1‑133 (MQ=255) gAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCttttt > 2:708376/1‑143 (MQ=255) aaaTTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTta > 2:351648/1‑143 (MQ=255) atttattgcgggggaTTAACTAAACAGGATTTCTCATGAGCAAGACCCTGGGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTtat < 1:629796/130‑1 (MQ=255) agaTTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAg < 1:301762/143‑1 (MQ=255) tACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATc < 2:496812/143‑1 (MQ=255) acgcgtgtcccAGACCTTTAGATCCCTGTAGGCTCAAACAGATAATTCATTGAATGATAACAATGGCGCAAATACATCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATcg < 1:440294/134‑1 (MQ=255) tCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCCGATAGTCAGTGAGTATATcgcg > 2:148253/1‑143 (MQ=255) tCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCCGATGCAGGTATTCAGTGAGTCTATcgcg > 2:197473/1‑143 (MQ=255) tGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTa < 2:509205/143‑1 (MQ=255) tacgcTGAGATCCGTTGTGGCTCAAACAGATAATGCATTGAATGATCAAACCCGCGCAAATGCAGCGGCATTTTTATAGGTTAAAAACATTGCTTGTGATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAgg < 1:436963/139‑1 (MQ=255) tGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCTCAAATACAAAGCCATTTGTAGAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGgatgat < 1:518225/143‑1 (MQ=255) tGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGgatgat < 1:708376/143‑1 (MQ=255) gagaTCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGatgatg > 2:137583/1‑143 (MQ=255) ccTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGCAGATc > 1:368488/1‑143 (MQ=255) cTTTAGGCGCAAACCGATCATGCCTCGAATGATAAAATTGGCGCTAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATcc < 1:277101/143‑1 (MQ=255) gCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTGTATTCTGATGCAGATAGTCAGTGAGTATATGGCGCTACTTCAGGGTGATGGAGAGCCggagaa > 2:510716/1‑143 (MQ=255) gCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCACGCTACTTCAGGATGATGTaaaaaccaaaaa > 1:111265/1‑132 (MQ=255) cTCAAACAGATAATGCATTGCATGATACACACGGCGCAAATACAGCGCAATTCCAACAAACCTAAGACCTCAAGGTGTATGGTCTACTGCAGATACACAGTGAGTATATCGCGCTCCTTCATGAGTATGTAGATCAGAAGAAc > 1:519502/1‑143 (MQ=255) tCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCCGTGAGTATATCGCGCTACTTCAGGATGATTGAGATACGCAGAACg > 1:351482/1‑143 (MQ=255) cAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATGCGGATGCAGATAGTGCGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGc < 2:309778/143‑1 (MQ=255) cAAACAGATAATGCATGGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGc < 2:86012/143‑1 (MQ=255) aaCAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACCTAGCTCTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTa < 1:594791/143‑1 (MQ=255) aaCAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCCCGCTACTTCAGGATGATGAAGAtagatggagcgcta > 2:648613/1‑130 (MQ=255) aaTGCATTGAATGCTAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACagaaga < 2:509237/143‑1 (MQ=255) cATTGTAGGATTAGAATGGCGCGTATACATCGTCATGTTTATAGGTTAAATGCGTTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTGCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAGAgg < 1:178454/143‑1 (MQ=255) cATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGAGGCAGATAGTCAGTGAGTATATCGCGCTAATTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAGAgg < 1:243804/143‑1 (MQ=255) ttGAATGTTAAAAAGGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTTCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTGCAGGATGATGTAGATCCGCACACCGCTACAGAAGAGAGGCa < 1:523496/143‑1 (MQ=255) aaTGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAGAGGCAtcg > 1:310433/1‑141 (MQ=255) tAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAGAGGCATTGTTGCt < 2:520072/143‑1 (MQ=255) aaagaTGGCGCAAATACAGCGCCATTGTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAGAGGCATTGTTGCTg < 1:612241/143‑1 (MQ=255) aaaTAGCGCAAATACAGCGCCATTTTTCTAGGTTAAAAACAGTGCTTTTGATATTCTGATGCAGATAGACAGTGAGTATATCACGCTACTTCAGATAGATGTAGAGCTGAAGAAGCCTACAGAAGAGAGGCATTGATGCTgcc > 1:590454/1‑141 (MQ=255) tGGCGCAAATTCAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAGAGGCATTGTTGCTGGCaaa < 1:177827/143‑1 (MQ=255) gcgcAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGCACGCTACAGCAGAGCGGCCTTGTTGCCGGCcaaca > 1:342705/1‑141 (MQ=255) gcgcAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAGAGGCATTGTTGCTGGCAAATa > 1:506529/1‑143 (MQ=255) cAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAGAGGCATTGTTGCTGGCAAATagaa < 2:569207/143‑1 (MQ=255) aTACAGCGCCATTTTTATGGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAGAGGCATTGTTGCTGGCAAATAgaagaa < 1:164086/143‑1 (MQ=255) aTACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAGAGGCATTGTTGCTGGCAAATAgaagaa < 2:26191/143‑1 (MQ=255) | TTGGACATTTAGTCTGGTTCTGGTCTATTGAAATTATTCGCAGAGATTTACGAAACAGAATTACTCATGAGCCAGACCCTGAGATCCCTTTAGGCTCAAACAGATAATGCATTGAATGATAAAAATGGCGCAAATACAGCGCCATTTTTATAGGTTAAAAACATTGCTTTTTATATTCTGATGCAGATAGTCAGTGAGTATATCGCGCTACTTCAGGATGATGTAGATCCGAAGAACGCTACAGAAGAGAGGCATTGTTGCTGGCAAATAGAAGAA > NC_000913/303499‑303774 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |