New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 4315808 | 42 (0.730) | 5 (0.090) | 5/270 | 7.7 | 11.1% | coding (276/558 nt) | phnN | ribose 1,5‑bisphosphokinase |
? | NC_000913 | = 4315818 | 40 (0.720) | coding (266/558 nt) | phnN | ribose 1,5‑bisphosphokinase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
TCACTGGCGTTTTCACGGCCACGGTTTTCCAGGCGCTGGCGGAGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCAACAGATTTTGCCCCGCGCGGGTAAAAAACTCCTGCTCGCTCAGGGCGATATGGTTTTCACTTC > NC_000913/4315668‑4315950 | tCACTGGCGTTTTCACGGCCCCGGTTTTCCAGGCGCTGGCGGAGGATCTCCGGCGACACCTGTAAACAGACGGGTTTCTTTTCCGGTTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTc < 2:908003/143‑1 (MQ=255) tCACTGGCGTTTTCACGGCCACGGTTTTCCAGGCGCTGGCGGCGGATCTCCGGCGAAACCTGTAAACAGACAGGCAGCAGCGCCGACTCATAGCGCGCCCGCGCCTGCCGCAGATGGGCGCGAGAGCCGTTGCCGAGCACggc > 1:215943/1‑141 (MQ=255) tCACTGGCGTTTTCACGGCCACGGTTTTCCAGGCGCTGGCGGAGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTc < 2:962878/143‑1 (MQ=255) tGGCGTTTTCACGGCCACGGTTTTCCAGGCGCTGGCGGAGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAAt > 1:856252/1‑143 (MQ=255) ggCGTTTTCACGGCCACGGTTTTCCAGGCACTGGCGGAGGATCTCGGGCGAGACCTGTAAACAGACGGGCAGCACCGCCGAGTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGGCGGCCAGCGCCTCGaacc > 1:820232/1‑141 (MQ=255) gCGTTTTCACGGCCACGGTTTTCCAGGCGCTGGCGGAGGATCTCCGGCGAAACCTGTAAACAGACAGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCCGATGGGCGCGTGAGCCCCTGACCAGCACGTCGCATcc > 1:823664/1‑143 (MQ=255) tttCACGGCCACGGTTTTCCAGGCGCTGGCGGAGGACCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCg < 2:457594/143‑1 (MQ=255) tCACGGCCACGGTTTTCCAGGCGCTGGCGGAGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACgccggattcgacgtg < 2:446443/143‑15 (MQ=255) cgcGGCCACCGTGTTACAGGCGGGGGCGGAGGATCTCCGGCGAACCCGGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGCCGGATTCGACGTGc < 2:225557/141‑1 (MQ=255) ccACGGTTTTCCAGGCGCTGGCGGAGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCa > 2:346688/1‑143 (MQ=255) cACGGTTTTCCAGGCGCTGGCGGAGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCag > 2:795115/1‑143 (MQ=255) aCGGTTTTCCAGGCGCTGGCGGAGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCcga > 1:143033/1‑143 (MQ=255) aCGGTTTTCCAGGCGCTGGCGGAGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCaga < 2:1013771/143‑1 (MQ=255) aCGGTGTTCCAGGCGCTGGCGGGGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCaga < 1:722003/143‑1 (MQ=255) gTTTTCCAGGCGCTGGCGGAGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATGGATAGCGCGCCCGCGCCTCCGGCAGATGGGCGCGTGAGCCGGTGCCCAGCACGTCGAATCCGGCGGGCGGCCAGAGAt > 2:976370/1‑143 (MQ=255) tCCAGGCGCTGGCGGAGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAAt < 1:346688/143‑1 (MQ=255) cgggCGGAGGATCGCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTcgacgc < 2:991029/141‑1 (MQ=255) gCGGAGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGAGTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATGAATCTcgacgccga > 2:804237/1‑143 (MQ=255) gttgaTCTCCGGTGACTCCTGTACACAGCTGGGCCGAAGCGTCGATTGTTGGCGCGCTCGTGCATGTGCCGAATGGGCGCGTGAGCCGTTGACCCGCATGTCGATTCCAGCTCGCTATCAGAGATCAATCTcgacgccgacgc < 1:770133/140‑1 (MQ=255) tctcCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACGAGCACGTCGAATCCGGCGTGCGGCCAGAGATCAATCCCGACGCCGACGCCagaa > 1:752228/1‑143 (MQ=255) gggCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACa < 2:565991/142‑1 (MQ=255) cGGCGAAACCTGTAAGCAGCCGGGCAGCGGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCTGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACa < 1:258797/143‑1 (MQ=255) cGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACa > 1:619344/1‑143 (MQ=255) cGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGAGCAATCTCGACGCCGACGCCGTAATACAGAc > 1:805019/1‑143 (MQ=255) tGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATACTCCAGACCGTTAGc > 1:897891/1‑143 (MQ=255) gTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGCACGTTAGCg > 1:588651/1‑143 (MQ=255) aaCAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGc < 2:365878/143‑1 (MQ=255) aCAGGCGGGCAGCGGGGCCGATTGACAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAGTCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGcc < 1:127064/143‑1 (MQ=255) agcGCCGATTGATAGCGGCGCCGCGCGGGCGGCAGAGGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCaa < 1:591577/143‑1 (MQ=255) gcgcCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCAAc > 2:141456/1‑143 (MQ=255) aGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACAAGCACGTAGAGTCCGGCGTGGAGCGTGAGAGCAAACGCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCAACAGATTTTGcccc > 2:743098/1‑143 (MQ=255) ccTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCATAAAGCCAACAGATATTACCCCGCGAGGGTaaaa > 1:184828/1‑143 (MQ=255) ccTGCGGCAGATGGGCGCGGGAGCCGTTGACCAGCACGTCGAACCCGGCGATCAGCCGGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCAACAGATTTTGCCCCGCGCGGGTaaaa < 2:326671/143‑1 (MQ=255) ggCAGGGGGGCGCGAGAGCCGTCGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCAACAGATTTTGCCCCGCGCGGGTAAAAAACTc < 1:97428/143‑1 (MQ=255) taggtcggCGCGTGGGCCGGTGACCAGCACGTCGAAGCCGGGGTGCAGCCAGAGATCGATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCAACAGATTTTGCCCCGCGCGGGTAAAAAACTCCt < 1:370887/137‑1 (MQ=255) ggtGGGGGCGTGAGCCGTTGGCCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCAACAGATTTTGCCCCGCGCGGGTAAAAAACTCCTgc < 1:36309/141‑1 (MQ=255) cgTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCGACAGATTTGGCCCCGCGCGGGTAAAAAACTCCTgctcgctccg > 2:479604/1‑141 (MQ=255) tGAGCCGGTGAGCAGCGCGTGGAAGCGGGCGTGCAGCCAGAGATCAGTGTCGACGCCGACGCCATAATACAGACCGTGAGCGTGCCAGCTTAAGGCCAACAGATTTTGCCCCGCGCGGGTAAAAAACTCCTGCTCGCTCAggg < 1:751508/143‑1 (MQ=255) ccGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCAACAGATTTTGCCCCGCGCGGGTAAAAAACTCCTGCTCGCTCAGGGCGat > 2:248609/1‑143 (MQ=255) ccGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCAACAGATTTTGCCCCGCGCGAGTAAAAAACTCCTGCCCGCTCAGGGCGat > 1:577888/1‑143 (MQ=255) aCCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTCAAGGCCAACAGATTTTGCCCCGCGCGGGTAAAAACCTCCTGCTCGCGCAGGGCGATATgggt > 1:740561/1‑141 (MQ=255) cAGCACGCCGAATCCGGCGTGCAGCCAGAGACCAATCTCGACGCCGACGCCATAATACAGACCGCTAGCGTGCCAGCTTAAGGCCAACAGATTTTGCCCCGCGCGGGTAAAAAACTCCTGCTCTCTCAGGGCGATATGGtttt < 2:54146/143‑1 (MQ=255) aCGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCAACAGATTTTGCCCCGCGCGGGTAAAAAACTCCTGCTCGCTCAGGGCGATATGGTTTTCACt > 2:920510/1‑143 (MQ=255) gTCGAATGCGGCGTGCAGCGAGAGATCAAGCTCGACGCCGACGCCAGAATACAGACCGTTAGCGTGCCAGCTTAAGGCCAACAGATTTTGCCCCGCGCGGGTAAAAAACTCCTGCTCGCTCAGGGCGATATGGTTTTCACTTc < 1:788656/143‑1 (MQ=255) gTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATGATACAGTCCGTTAGCGGGCCAGCTTGAGGCCACCAGATTTTGCCCCGCGCGGGTACAAAACTCCTGCTCGCTCAGCGCGGTATGGTTTTCACTTc > 2:295252/1‑143 (MQ=255) | TCACTGGCGTTTTCACGGCCACGGTTTTCCAGGCGCTGGCGGAGGATCTCCGGCGAAACCTGTAAACAGACGGGCAGCAGCGCCGATTGATAGCGCGCCCGCGCCTGCGGCAGATGGGCGCGTGAGCCGTTGACCAGCACGTCGAATCCGGCGTGCAGCCAGAGATCAATCTCGACGCCGACGCCATAATACAGACCGTTAGCGTGCCAGCTTAAGGCCAACAGATTTTGCCCCGCGCGGGTAAAAAACTCCTGCTCGCTCAGGGCGATATGGTTTTCACTTC > NC_000913/4315668‑4315950 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |