New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 141396377 (1.340)7 (0.130) 7/264 6.4 8.9% intergenic (‑36/+21) ralR/recT Rac prophage, restriction alleviation protein/Rac prophage, recombination and repair protein
?NC_000913 = 1413968 71 (1.310)intergenic (‑41/+16) ralR/recT Rac prophage, restriction alleviation protein/Rac prophage, recombination and repair protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAGGAATCTGCAGGATCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACG  >  NC_000913/1413828‑1414104
                                                                                                                                            |                                                                                                                                        
cGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTTTCAGTGGCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTaca                                                                                                                                        <  2:426772/143‑1 (MQ=255)
 gCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTacac                                                                                                                                       >  2:629385/1‑143 (MQ=255)
 gCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTacac                                                                                                                                       >  1:944331/1‑143 (MQ=255)
 ccctCCCTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTacac                                                                                                                                       <  1:379581/140‑1 (MQ=255)
       gTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAg                                                                                                                                 >  2:99038/1‑143 (MQ=255)
        ttACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCaac                                                                                                                                >  2:316613/1‑141 (MQ=255)
          acacTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTATAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCt                                                                                                                              <  1:305670/143‑1 (MQ=255)
          acacTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGCTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCt                                                                                                                              <  2:279230/143‑1 (MQ=255)
            acTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGa                                                                                                                            >  2:170564/1‑143 (MQ=255)
             cctCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGaa                                                                                                                           <  2:729487/141‑1 (MQ=255)
              ttCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAat                                                                                                                          >  2:916320/1‑143 (MQ=255)
                cGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAatta                                                                                                                        <  1:289257/143‑1 (MQ=255)
                 gCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAattat                                                                                                                       >  2:661396/1‑143 (MQ=255)
                   tCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTc                                                                                                                     <  2:111602/143‑1 (MQ=255)
                   tCGGTAATAGCCTGATATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCAGAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTc                                                                                                                     <  1:192335/143‑1 (MQ=255)
                   tCGGTAATACCCTGAAATGGCTTTCACCGTCACTGATGGACAACCACAAAATGGACATGGTTTACCATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTc                                                                                                                     <  2:219141/143‑1 (MQ=255)
                       tAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCcttt                                                                                                                 >  1:830163/1‑141 (MQ=255)
                       tAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCctct                                                                                                                 >  2:120336/1‑143 (MQ=255)
                       tAATATCCTGAAATGGCTTTCACCGTTACTGACGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCCCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCctct                                                                                                                 <  2:142633/143‑1 (MQ=255)
                            tCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAAtt                                                                                                            >  2:294645/1‑143 (MQ=255)
                             ccTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTa                                                                                                           >  2:224202/1‑143 (MQ=255)
                              cTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACATCGCCAGGCTGAATTATTCCTCTGAATTAt                                                                                                          <  2:975697/143‑1 (MQ=255)
                              cTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTAt                                                                                                          >  2:255630/1‑143 (MQ=255)
                              cTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGACAGGCTGAATTATTCCTCTGAATTAt                                                                                                          >  2:446628/1‑143 (MQ=255)
                              cTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTGTTCTCATAAACAATATTACCAGTTGACAGTGCATTACACCACCAAGCAGAATTATTTCTCTGAATCAt                                                                                                          >  1:63018/1‑143 (MQ=255)
                               tGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATc                                                                                                         >  2:168921/1‑143 (MQ=255)
                                 aaaTGGCTCTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGa                                                                                                       <  1:824773/143‑1 (MQ=255)
                                 aaaTAGCATTCACCGTTACTGCTGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGa                                                                                                       <  2:822627/143‑1 (MQ=255)
                                    tGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTa                                                                                                    <  1:390129/143‑1 (MQ=255)
                                      gCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTaca                                                                                                  <  2:11041/143‑1 (MQ=255)
                                        tttCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACt                                                                                                <  2:425205/143‑1 (MQ=255)
                                           cACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTa                                                                                             <  2:56421/143‑1 (MQ=255)
                                           cACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTa                                                                                             <  1:170564/143‑1 (MQ=255)
                                           cACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAACTCTTCTCATATAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTa                                                                                             <  1:549788/143‑1 (MQ=255)
                                            aCCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGTTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTAt                                                                                            >  1:832888/1‑143 (MQ=255)
                                             ccGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGACAGGCTGAATTATTCCTCTGCATTATCGCTCACACTGTAtt                                                                                           >  1:102772/1‑143 (MQ=255)
                                              cGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTc                                                                                          >  2:840725/1‑143 (MQ=255)
                                                  aCTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTGCAAGTTCGCGGTGCATTACACCGCCAGGCTGAGTTATTCCTCTGAATCATCGATTCCCCTGTCTTCCCCg                                                                                      >  2:534830/1‑143 (MQ=255)
                                                    tGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGt                                                                                    <  1:586347/143‑1 (MQ=255)
                                                         gACAACCACAAAATGGACATGGTTTAAAATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATAGATTACACTGTATTACACGGGTAATa                                                                               >  2:355638/1‑143 (MQ=255)
                                                           cAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACa                                                                             <  1:843911/143‑1 (MQ=255)
                                                              ccACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACagag                                                                          >  2:32720/1‑143 (MQ=255)
                                                               cacaAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAgg                                                                         >  2:899586/1‑143 (MQ=255)
                                                                acaAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAGGa                                                                        >  2:144504/1‑143 (MQ=255)
                                                                     aTGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAATAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAGGAATCTg                                                                   <  2:425748/143‑1 (MQ=255)
                                                                     aTGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTCCACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAGGCATCTg                                                                   >  1:823380/1‑143 (MQ=255)
                                                                        gACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAGGAATCTGCAg                                                                <  1:99038/143‑1 (MQ=255)
                                                                         aCATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTCCACTGTATTCCCCGGTTAATACAGAGGAATCTGCAgg                                                               >  1:584416/1‑143 (MQ=255)
                                                                           aTGGTTTAACATTGTCATATCTCATAATTTTTCTCTTCTGACATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAGGAATCTGCAGGAt                                                             <  1:982067/143‑1 (MQ=255)
                                                                           aTGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAGGAATCTGCAGGAt                                                             <  1:154128/143‑1 (MQ=255)
                                                                            tGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAGGAATCTGCAGGATc                                                            <  1:287357/143‑1 (MQ=255)
                                                                              gTTTAACATTGTCATATCTCACAATTTTTCTCACAACAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAGGAATCTGCAGGATCGa                                                          <  2:110389/143‑1 (MQ=255)
                                                                               tttAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGTTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAGGAATCTGCAGGATCGAt                                                         >  1:335441/1‑143 (MQ=255)
                                                                                ttAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAGGAATCTGCAGGATCGAtt                                                        <  1:120336/143‑1 (MQ=255)
                                                                                 tcaCATTGTCATATCTCATAATTTTTCTCATAACAAATATTACAAGTTGGCGGTGCATTACACCTCTAGAATGAATTATTCCTTTGAATTGTTGATTACACTGTATTCCCCGGTTAATACCGATGAATTGGCAGGAttgctcg                                                       >  1:802134/3‑137 (MQ=255)
                                                                                 tAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTTCACCGCCCCGCGGAATTATTCCTCTGAATTATCGATTACACTCTACTCCCCGGTTCATACAGAGGACTCTGCAGGactggttg                                                       >  1:720732/1‑136 (MQ=255)
                                                                                  aaCATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAGGAATCTGCAGGATCGATTGt                                                      <  2:801629/143‑1 (MQ=255)
                                                                                   aCATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAGGAATCTGCAGGATCGATTGTc                                                     <  2:485799/143‑1 (MQ=255)
                                                                                   aCATTGTCATATCTCATAATTTTTCTCATAAAAAATATTCAAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATGACACTGTCTTCCCCGGTCAATCCACAGACATCTGCAAGactaattctc                                                     >  1:633736/1‑134 (MQ=255)
                                                                                       tGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAGGAATCTGCAGGATCGATTGTCAGTg                                                 <  2:944331/143‑1 (MQ=255)
                                                                                        gTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAGGAATCTGCAGGATCGATTGTCAGTgg                                                <  2:976057/143‑1 (MQ=255)
                                                                                        gTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAGGAATCTGCAGGATCGATTGTCAGTgg                                                <  1:589784/143‑1 (MQ=255)
                                                                                             atCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTAACGCAGGCACTGTATTCCCCGGTTAATACAGAGGAATCTGCAGGATCGATCGTCAGTGGTTCCt                                           >  2:468899/1‑143 (MQ=255)
                                                                                                tcATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTaa                                                                                 >  1:119754/1‑102 (MQ=255)
                                                                                                tcATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTaa                                                                                 <  2:119754/102‑1 (MQ=255)
                                                                                                tcATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAGGAATCTGCAGGATCGATTGTCAGTGGTTCCtttt                                        >  2:488258/1‑143 (MQ=255)
                                                                                                  aTAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATACCTCTGAATTATCGATTACACTGTATTCCCCGGTCAATAAAGAGGAAACTACAGGACCGAAGGTCATTGGATCGTTTTCa                                      >  2:346948/1‑143 (MQ=255)
                                                                                                    aaTTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAGGAATCTGCAGGATCGATTGTCAGTGGTTCCTTTTCATc                                    <  2:357270/143‑1 (MQ=255)
                                                                                                           ctcATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAGGAATCTGCAGGATCGATTGTCAGTGGTTCCTTTTCATCCATTGAt                             <  2:919321/143‑1 (MQ=255)
                                                                                                              ataaataaTCTTTCCAGTGGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAGGAATCTGCAGGATCGATTGTCAGTGGTTCCTTTTCATCCATTGATACt                          <  2:170706/143‑1 (MQ=255)
                                                                                                               gaaaaaaTATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACGGAGGAATCTGCAGGATCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTg                         <  1:197449/142‑1 (MQ=255)
                                                                                                                aaaaaaTATTTCAAGTTGGCGTTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAGGAATCTGCAGGATCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGc                        <  2:832888/143‑1 (MQ=255)
                                                                                                                aaaaaaTATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAGGAACCTCACGGATCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGc                        >  2:84979/1‑143 (MQ=255)
                                                                                                                         ttCACGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAGGAATCTGCAGGATCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGAt               <  2:382644/143‑1 (MQ=255)
                                                                                                                          tCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCGGGATTAGTCTGAGGGATCTGCAGGATTTATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGGTGGAtc              >  2:518955/1‑143 (MQ=255)
                                                                                                                                      tGCATTACACCGCCAGGCTGAATTATTCCTCTTAATTATCGATTACACTGTATTCTCCGGTTAATACAGAGGAATCTGCAGGATCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACg  <  1:224202/143‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                        
CGCATCCGTTACACTTCGCTCGGTAATATCCTGAAATGGCTTTCACCGTTACTGATGGACAACCACAAAATGGACATGGTTTAACATTGTCATATCTCATAATTTTTCTCATAAAAAATATTTCAAGTTGGCGGTGCATTACACCGCCAGGCTGAATTATTCCTCTGAATTATCGATTACACTGTATTCCCCGGTTAATACAGAGGAATCTGCAGGATCGATTGTCAGTGGTTCCTTTTCATCCATTGATACTGCACGCTGGATCTCAATTGATACG  >  NC_000913/1413828‑1414104

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.