New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 4363385 = | 47 (0.820) | 4 (0.070) | 4/264 | 8.1 | 7.1% | coding (1659/1698 nt) | dsbD | thiol:disulfide interchange protein and activator of DsbC |
? | NC_000913 | 4363423 = | 60 (1.110) | coding (1621/1698 nt) | dsbD | thiol:disulfide interchange protein and activator of DsbC | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
CCCAGTACATCTTCACGTTGCACGCTATTTTCCTCCGTCTTTCCCACTGCAAGTGTCGTTCACGGTTGGCGATCGCGCAAATGTGCGCTGAAGGTTTCAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTGAAGTAAGACCGTGTCTGCTAACGCTTTTTGC > NC_000913/4363287‑4363556 | cccAGTACATCTTCACGTTGCACACTATTTTCCTCCGTCTTTCCCACTGCAAGTGTCGTTCACGGTTGGCGATCGCGCAAATGTGCGCTGAAGGTTTCAGCATCCATAAAGCCCGTGACGCGTGCCTGTGGATGCTCCCGGcc > 1:570825/1‑143 (MQ=255) ccAGTACATCTTCACGTTGCACGCTATTTTCCTCCGTCTTTGCCACTGCAAGTGTCGTTCACGGTTGGCGGTCGCGCATATGTGCGCTGAAGGTTTCAGTATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCt < 2:454072/143‑1 (MQ=255) aGTACATCTTCACGTTGCACGCTATGTGCCTCCGTCTTTCCCACTGCAAGGGTCGTTCACGGTTGGCGATCGCGCAAATGTGCGCTGAAGGTTTCAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTg < 1:308677/143‑1 (MQ=255) ctctaagaCGCGATTGTCCTCCATCTTTCACAATGCAAGTGTAGTTCACGGGTGGCGATCGCGCAAAAGAGCGCGGAAGGTTTCAGAATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTACGTCaaaaa < 1:344110/136‑1 (MQ=255) ttGCACGCTATTTTCCTCCGTCTTTCCCACTGCAAGTGTCGTTCACGGTTGGCGATCGCGCAAATGTGCGCTGAAGGTTTCAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAaga < 2:133427/143‑1 (MQ=255) aTTTTCCTCCGTCTTTCCCACTGCAAGTGTCGTTCACGGTTGGCGATCGCGCAAATGTGCGCTGAAGGTTTCAGCATCCAGAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCg < 2:930965/143‑1 (MQ=255) tcctccGTCTTTCCCACTGCAAGTCTCGTTCACGGTTGGCTATCGCGCAAATGTGCGCTGAAGGTTTCAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAg < 2:827753/143‑1 (MQ=255) cgtCCCACTGCAAGTGTCGTTCACGGTTGGCGATCGCGCAAAGGTGCGCTGAAGGTTTCAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGAc < 1:978977/141‑1 (MQ=255) ttCCCACTGCAAGTGTCGTTCACGGTTGGCGATCGCGCAAATGTGCGCTGAAGGTTTCAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACa > 2:862455/1‑143 (MQ=255) ccACTGCAAGTGTCGTTCACGGTTGGCGATCGCGCAAATGTGCGCTGAAGGTTTCAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCCTGTCCGTCAAAAAAGAGCATTGTCGGTAGGCCAAGGACACTa > 1:113698/1‑143 (MQ=255) aCTGCAAGTGTCGTTCACGGTTGGCGATCGCGCAAATGTGCGCTGAAGGTTTCAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAg > 2:40114/1‑143 (MQ=255) aCTGCAAGTGTCGTTCACGGTTGGCGATCGCGCAAATGTGCGCTGAAGGTTTCAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAg < 2:21554/143‑1 (MQ=255) aCTGCAAGTGTCGTTCACGGTTGGCGATCGCGCAAATGTGCGCTGAAGGTTTCAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAg < 2:100007/143‑1 (MQ=255) gggtCGTTCACGGTTGGCGATCGCGCAAATGTGCGCTGAAGGTTTCAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCGGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCttt < 1:962800/141‑1 (MQ=255) gtCGTTCACGGTTTGCGATCGCGCAAATCTGCGCTGAAGGTTTCCGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTTGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTaa < 2:198487/143‑1 (MQ=255) ggcACGGTTGGCGACCGCGCAAATGTGCGCTGAAGGTTTCAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAgc < 2:862846/141‑1 (MQ=255) cggcgtcggCGATCTCGCGCATGTGCGCTGCGGGTTGCAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCGTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAgcgc < 1:849630/136‑1 (MQ=255) atgggtggttgATGGCGCAAATGTGCGGGGATGGTTTCAGCATACAGATAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCAAAGGACATTAAGATGCTTTAACAgcgc < 1:30702/133‑1 (MQ=255) ttGGCGATCGCGCAAATGTGCGCTGAAGGTTTCAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGACGCTTTAACAGCGCGACAt > 1:845515/1‑143 (MQ=255) cccaTCGCGCAAACGTGCGATGAAGGTTTCAGCCTCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCAAAAAAAAAAAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCtt < 1:799903/140‑1 (MQ=255) cgcgCAAATGTGCGCTGAAGGTTTCAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGcg > 2:931898/1‑143 (MQ=255) tgtgCGCTGAAGGTTTCAGCATCCATAAAGCCCGTGACGTGTGCTTGTGCATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGTTAGGTCAAGGACATTAAGATGTTTTAACACCGCCACATCTTGTGCGTCGTTGGc < 2:663300/143‑1 (MQ=255) gttcgcTGAAGGTTTCAGCATCCATAAACCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGcc < 1:139220/140‑1 (MQ=255) gcgcGGAAGGTTTCAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGt < 2:666697/143‑1 (MQ=255) gctgtcgctttCACCATCCATCCCGCTCGTGACGCGTGCTTGTGGAGGCTCCTGGCCTTGTCCGGCAAGAAAGAGAATTGTCCGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTGGTGCGTCGTTGGCCGTGa < 1:939057/135‑1 (MQ=255) gcTGAAGGTTTCAGCATCCATAAGGCCCGTGTCGCGGGCTTGTGGATGCGCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGa < 2:88451/143‑1 (MQ=255) gcTGAAGGTTTCAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGa > 1:640897/1‑143 (MQ=255) gcTGAAGGTTTCAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGACAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCACCACATCTTGTGCGTCGTTGGCCGTGa > 1:112974/1‑143 (MQ=255) cTGAAGGTTTCAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGAc > 2:793958/1‑143 (MQ=255) tGAAGGTTTCAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGACTTCTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACCTCTTGTGCGTCGTCGGCCGTCACg > 1:262060/1‑143 (MQ=255) tGAAGGTTTCAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACg > 2:487305/1‑143 (MQ=255) aGGTTTCAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTg < 2:177737/143‑1 (MQ=255) tttCAGCATCCGTAAAGCCCGTGACGCGTGCTTGTGGATGCCCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAGGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGcc < 1:902183/143‑1 (MQ=255) tttCAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTCGcc > 2:214258/1‑143 (MQ=255) tgaGCATCCGTTAGGGCGGTGACGCGTGCTTGTGGTGGCGCGTGGGGTTGTCGGTCAAAAAGGAGAATGGGCGGTAGGCCAAGGACATTAAGATGCGTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTg < 1:296791/141‑1 (MQ=255) cAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAGAAGGGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTGa > 1:582674/1‑143 (MQ=255) cAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTGa < 1:793958/143‑1 (MQ=255) tgCATCCATAAAGCGCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAACAAAGAGAATTGTCGGTCGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTGaa < 1:47886/142‑1 (MQ=255) aGCATCCCTACAGCCCGTGACCCCGGCTGGTGGATGCTCCTTGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTGaa < 1:5957/143‑1 (MQ=255) aGCATCCCAAAAGCCCTGGACGCGGGACTGTCGACGCTCCTGGCGTGGTCCGTCAAAAAAGAGACCTGTCGGGAGGCCAAGGACAGTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTGaa < 2:35830/143‑1 (MQ=255) aGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTGaa > 2:359921/1‑143 (MQ=255) aGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCATCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGGCGTGACGTTGGCCTGaa > 2:307842/1‑143 (MQ=255) aGCATCCAGAAGGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCGTGTCCGTCAAAAAAGCGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTGaa < 2:5769/143‑1 (MQ=255) cATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAGCAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTGAGGt > 2:680647/1‑143 (MQ=255) cATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCCTGTGCGTCGTTGGCCGTGACGTTTGCCTGCAGt > 1:339242/1‑143 (MQ=255) cATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTGAAGTAAGa < 2:700906/143‑1 (MQ=255) cATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTGAAGTAAGa < 2:168948/143‑1 (MQ=255) gCCCGTGACGCGGGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTGAAGTAAGACCgtgt < 1:863391/143‑1 (MQ=255) ccGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTGAAGTAAGACCGTGTCt < 1:40114/143‑1 (MQ=255) cGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTGAAGTAAGACCGTGTCTg > 1:486271/1‑143 (MQ=255) cGTGACGCGTGCTTGCGGATGCTCCGGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTGAAGTAAGACCGTGTCTg < 2:265993/143‑1 (MQ=255) cctcgTGCTCGTGGATGCTGCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTGAAGTAAGACCGTGTCTGCTaa < 1:910152/140‑1 (MQ=255) aCGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTGAAGTAAGACCGTGTCTGCTaa < 2:714483/143‑1 (MQ=255) gcgTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTGAAGTAAGACCGTGTCTGCTAACg > 2:945337/1‑143 (MQ=255) gTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGGCGTTGGCCTGCCGGAGGACCGTGTCTGCtgctgca > 2:247047/1‑137 (MQ=255) ttGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTGAAGTAAGACCGTGTCTGCTAACGCttttt > 2:391597/1‑143 (MQ=255) ttGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTGAAGTAAGACCGTGTCTGCTAACGCttttt < 1:945337/143‑1 (MQ=255) ttGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGGGACGTTGGCCTGAAGTGAGACCGTGTGTGCTAACGCttttt > 2:23459/1‑143 (MQ=255) gtgGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTGAAGTAAGACCGTGTCTGCTAACGCTTTTTGc < 1:227829/143‑1 (MQ=255) gtgGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTGAAGTAAGACCGTGTCTGCTAACGCTTTTTGc < 1:359921/143‑1 (MQ=255) ggggATGCTCCTGGCCTGGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACAGTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTGAAGTAAGACCGTGTCTGCTAACGCTTTTTGc < 2:576552/141‑1 (MQ=255) | CCCAGTACATCTTCACGTTGCACGCTATTTTCCTCCGTCTTTCCCACTGCAAGTGTCGTTCACGGTTGGCGATCGCGCAAATGTGCGCTGAAGGTTTCAGCATCCATAAAGCCCGTGACGCGTGCTTGTGGATGCTCCTGGCCTTGTCCGTCAAAAAAGAGAATTGTCGGTAGGCCAAGGACATTAAGATGCTTTAACAGCGCCACATCTTGTGCGTCGTTGGCCGTGACGTTGGCCTGAAGTAAGACCGTGTCTGCTAACGCTTTTTGC > NC_000913/4363287‑4363556 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |