New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	647423 =	63 (1.190)	3 (0.060)	3/478	NT	4.8%	coding (87/879 nt)	citG	2‑(5''‑triphosphoribosyl)‑3'‑dephosphocoenzyme‑A synthase
	?	NC_000913	647850 =	59 (1.150)					coding (186/552 nt)	citX	apo‑citrate lyase phosphoribosyl‑dephospho‑CoA transferase

CTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGCTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCGGGAATTGATACCGCATGGTGGCTGGCGAGTTCAGGAAGCAGGTGCATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGGT  >  NC_000913/647579‑648109                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                    cTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGCTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTa                                                                                                                                                                                                                                                                  >  1:374920/1‑275 (MQ=255)        ttgtgcgaacacagggcggcggcGAGGCGGCATTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATTTTCAAGCTCAATGGTGGCGAGCTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAAtt                                                                                                                                                                                                                                                            <  1:171479/260‑1 (MQ=255)                       gCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTAGGTTCAAGCTCAATGGTGGCGAGCTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCCCCTGAATTTGCCAGCCCTGTTTTGCGGCCAAGGCACGCCAGGCTGGCCACCCATGATTAAAAATTCCGCTTGTGTCCTCg                                                                                                                                                                                                                                             >  1:138316/1‑274 (MQ=255)                              cgAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTCTGTTCAAGCTCAATGGTGGCGAGCCTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGACTTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCCAGGCTGTCACCCCCTCATTAAACATTATGCGTGTGCCCTCCCTGTcgt                                                                                                                                                                                                                                      >  2:115417/1‑272 (MQ=255)                              cgAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGCTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGCAACCAGTGCAGCCTGCTCCTGAATTTGCCCGCCCGGTTTTGCGGCTAAGGCACGCAAGGCTGTCCCGCCCTGATTAAAAATTCGGCGTGTTACCTCCCTGTCtt                                                                                                                                                                                                                                      >  2:214877/1‑274 (MQ=255)                                 ggcggcATGGAATAGTCGCGGCGGGAGTGAATTTCGCCTTAGGGCGTCAGGACATCGAAATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGGTTGAGGTCGCGGGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAAt                                                                                                                                                                                                                                  <  2:309022/275‑1 (MQ=255)                                                   cggcggGAGAGAATTTCGCCTTCGGGCGTCAGGACCTCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGCTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTTCAGCCTGCTCCTGAATTTGCCAGCCCTGGTTTGCGGCTAAGGCACGCAAGGCGGTCACGCCATGATTAAAAATTCGGCTTGTGCCCTCGCCGTCTTTAATCGGCCCAGGGCCAAcaaa                                                                                                                                                                                                                >  1:417420/1‑272 (MQ=255)                                                   cggcggGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGCTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACTCCATGATTAAAAATTAGGCGGGTGACCTCGCTGTCTTTCATCGGCCCAGGCGCGACCAc                                                                                                                                                                                                                >  2:112127/1‑275 (MQ=255)                                                      ggggAGAGAATTTCGCCTTCGGGCGTCAGGACATCGAGATCCCATAACGGCCCGGGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGCTTGAGGTGGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACgg                                                                                                                                                                                                              <  2:430636/273‑1 (MQ=255)                                                          agagaATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGCTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAg                                                                                                                                                                                                         <  1:338904/275‑1 (MQ=255)                                                              aaTTGCGCCTTCGGGCGTCAGGCCATCGATGTCCCATAACCGCCCGGGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGCTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCGCCGGCCCGCTGGCGGAAACCAGGGCAGCCTGCTCCTTAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGgag                                                                                                                                                                                                      <  2:161839/274‑1 (MQ=255)                                                               atgtccccTTCGGGCGTCAGGAGATCGAGAACCCATAACCGCCCGAGAGGATGACTATGTTCAAGATCAATGGTGGCGCGCTTGAGGTGGCGAGCCGGGGCGTGAATGCTCAACATGCCCTCCGGCCCGATGGCGGAAACCAGTGCAGCCTGATCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGAc                                                                                                                                                                                                    <  1:300966/269‑1 (MQ=255)                                                               aTTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGCTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGAc                                                                                                                                                                                                    <  2:374919/275‑1 (MQ=255)                                                                  tCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGCTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAg                                                                                                                                                                                                 <  1:376763/275‑1 (MQ=255)                                                                             cggcAGGACCTAGATACCCCAGAACCGCCCGGGAGAATGACTATGTTAAAGCTCAATGGTGGCGAGCGTGAGGTCGCTGGCCGGGGCGGCAATGCTCCACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGAt                                                                                                                                                                                      <  2:301173/272‑1 (MQ=255)                                                                                      aTCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGCTTGAGGTCGCGAGCCGGGGCGGCACTGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTCAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCCACCACGGTAAAGGAGCACAGTGGAACAGGGTGGCGCTTg                                                                                                                                                                              >  2:281189/1‑274 (MQ=255)                                                                                              cccATAACCGCGCGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGCTTGAGGGCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACg                                                                                                                                                                     <  1:357176/275‑1 (MQ=255)                                                                                                 aTAACCGCCCGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGCTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACgtg                                                                                                                                                                   >  1:40100/1‑274 (MQ=255)                                                                                                  tAACCGCCCGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGCTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGtt                                                                                                                                                                 >  1:361122/1‑275 (MQ=255)                                                                                                  tAACCGCCCGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGCTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGCCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGtt                                                                                                                                                                 >  2:336131/1‑275 (MQ=255)                                                                                                     ccGCCCGGGAGGATGACTATGTTCAAGCTCAAGGGTGGCGAGCTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACg                                                                                                                                                                     <  2:40100/268‑1 (MQ=255)                                                                                                        cccGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGCTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAACGGAGACCAGTTGAACAGGCTGGCGCTTGAGCCAGACGTGTTGCCGt                                                                                                                                                            >  2:173621/1‑274 (MQ=255)                                                                                                        cccGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGCTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCACGCGCAACCACGGTACAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGt                                                                                                                                                            >  1:1701/1‑274 (MQ=255)                                                                                                           aaagcccagccggctgcgcgcgtgcaaaaccccatcaccttaccgatttactcaaccgcatggaggcactgctgaacgatgtcgatgcctgcaacgtcaactaaaaccacaaagcttgcgacgtcattaatcgatgagtacgccctgctgtgctggcgcgccatgATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCtt                                                                                                                                                        <  1:24823‑M2/110‑1 (MQ=255)                                                                                                                      gttGTCCAACCTTAATGGGGGCGGGCTGGAGGTCGCGAGCCGTGGCGGCAATGCTCAACCTGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATcc                                                                                                                                             <  1:301107/273‑1 (MQ=255)                                                                                                                               gcgtggaaaacccatcaactgaccgatttactcaaccgcatggaggcactgctgaacgatgtcgatgcctgcaacgtcaactaaaaccacaaagcttgcgacgtcattaatcgatgagtacgccctgctgggctggcgcgccatgATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGCCg                                                                                                                                    >  2:334505‑M2/146‑275 (MQ=255)                                                                                                                               gCTCAATGGTGGCGAGCTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCACGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACACGTGGAACAGGATGGCGACTGAGCCAGAAGTGTTGACGAGCTGGCAGTGCATCCGGGCTGACg                                                                                                                                    >  1:402964/1‑275 (MQ=255)                                                                                                                               gCTCAATGGTGGCGAGCTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTACTCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGCAAAGGCTGGCGCTTGAGCCAGACGTGTTGCCGTGCTTTCCTTTCACCCCGGCTGACg                                                                                                                                    >  2:354689/1‑275 (MQ=255)                                                                                                                               gCTCAATGGTGGCGAGCTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGCACAGGAAGGCGCTTGAGCCAGACGTTTTGCCGTGCTTGCCTTTCATCACGGccgccg                                                                                                                                    >  2:320514/1‑270 (MQ=255)                                                                                                                               gCTCAATGGTGGCGAGCTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGGGTTGCCGTGCTTGCCTTTTACCCCGGGTGACg                                                                                                                                    >  2:301107/1‑275 (MQ=255)                                                                                                                                 tCAATGGTGGCGAGGTTGAGGTCGGGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGag                                                                                                                                  <  2:310082/275‑1 (MQ=255)                                                                                                                                  cAATGGTGGCGAGCTGGGGGTCGCGGGCCCGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGag                                                                                                                                  <  2:1701/274‑1 (MQ=255)                                                                                                                                        tggCGAGGTTGGGGGCGCGGGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCCGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCg                                                                                                                           <  1:241196/275‑1 (MQ=255)                                                                                                                                        gggggggCTGGAGGGCGGGGGCCGGGGCGGCAAGGCTCAACAGCCCCTCCGGCCCGCTGGCGGAAACCAGGGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCg                                                                                                                           <  2:457477/269‑1 (MQ=255)                                                                                                                                        acccatcaactgaccgatttactcaaccgcatggaggcactgctgaacgatgtcgatgcctgcaacgtcaactaaaaccacaaagcttgcgacgtcattaatcgatgagtacgccctgctgggctggcgcgccatgATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCg                                                                                                                           <  1:334506‑M2/139‑1 (MQ=255)                                                                                                                                         ggCGGGCTTGGGGTCGCGGGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTGGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCg                                                                                                                           <  2:251515/274‑1 (MQ=255)                                                                                                                                         ggCGAGGTTGAGGTGCGGCGCGTGGGCGGCAATGCTCCACATGCCCTCCGGCCCGCTGGCGGAAAACAGTGAAGCCTGCTCCTGAAGTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCg                                                                                                                           <  1:285702/274‑1 (MQ=255)                                                                                                                                          gCGAGCTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCCACCCCGGTAAAGGAGCCCAGTGGAACAGGCAGGCGCTTGAGCCAGACGTGTTGCCGTCCCTGCCTTTCATCCCGGCTGACCAGAAGCTCggg                                                                                                                         >  2:92658/1‑275 (MQ=255)                                                                                                                                               cTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCGGGAAtt                                                                                                                     >  1:379674/1‑274 (MQ=255)                                                                                                                                               cTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACCAGCAGCCCGGGAAtt                                                                                                                     >  2:140581/1‑274 (MQ=255)                                                                                                                                                  gAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCGGGAATTGATa                                                                                                                 <  2:361121/275‑1 (MQ=255)                                                                                                                                                   aGGTCGCCAGTCGGGCCGGCAATGCCCAACCTGCCATCCGTCCCGCTGGCGGCAACCAGTGTGGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCGGGAATTGATAc                                                                                                                <  1:112127/275‑1 (MQ=255)                                                                                                                                                         cgAGCCGGGGCGGCAATGCTCAACATGCCCCCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCGGGAATTGATACCGCAt                                                                                                           <  2:377046/274‑1 (MQ=255)                                                                                                                                                                    ggcAATGCGCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCGGGAATTGATACCGCATGGTGGCTGGCg                                                                                                <  2:125192/274‑1 (MQ=255)                                                                                                                                                                           cTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGCCGAGCAGCCCGGGAATTGATACCGCATGGTGGCTGGCGAGGTCAgg                                                                                        >  2:92264/1‑275 (MQ=255)                                                                                                                                                                                     ccTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGCCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCGGGAATTGATACCGCATGGTGGCTGGCGAGTTCAGGAAGCAGGTGc                                                                              <  1:336132/275‑1 (MQ=255)                                                                                                                                                                                      cTCCGGCCCGCTGGCGGAAACCAGGGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCGGGAATTGATACCGCATGGTGGCTGGCGAGTTCAGGAAGCAGGTGCa                                                                             <  2:137305/275‑1 (MQ=255)                                                                                                                                                                                       tCCGGCCCGCTGGCGGAAACCAGTGCAGGCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCGGGAATTGATACCGCATGGTGGCTGGCGAGTTCAGGAAGCAGGTGCAt                                                                            <  2:428015/275‑1 (MQ=255)                                                                                                                                                                                                 tGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGCCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCGGGAATTGATACCGCATGGTGGCTGGCGAGTTCCGGGAGCCGGTGACGGGCTTATTc                                                                   >  2:127494/1‑274 (MQ=255)                                                                                                                                                                                                          gcAGTGGAGCATTGTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTTACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAGCAGGATGGCGCTTGAGCGAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGGTGACGAGCAGCTCGGGAATTGATACCGCATGGTGGCTGGCGAGTTCAGGAAGCAGGTGCATGGCTTATTCCTTCACCTg                                                          <  1:214877/273‑1 (MQ=255)                                                                                                                                                                                                            aggtcacactgtcgctaaaTTGGCCAGGCCTGTGTTGCGGCGACGGCACGCAAGGCGTGCTCGCCATGATTAAGAATTCGGCGGGTGACCTCGCTGTCTTTAAGCGGCCCATGCGCAACCACGGTAAAGTGTACCAGTGGAACAGGATGGCGGGTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCGGGAATTGATACCGCATGGTGGCTGGCGAGTTCAGGAAGCAGGTGCATGGCTTATTCCTTCACCTGATg                                                       <  2:46428/258‑1 (MQ=255)                                                                                                                                                                                                               gCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGGAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCGGGAATTGATACCGCATGGTGGCTGGCGAGTTCAGGAAGCAGGTGCATGGCTTATTCCTTCACCTGATGca                                                     <  1:504139/274‑1 (MQ=255)                                                                                                                                                                                                                cAGCCTTCGCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCAAGCCATGATTAAAAATTCGGCGTGTTACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGGCCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCGGGAATTGATACCGCATGGTGGCTGGCGAGTTCAGGAAGCAGGTGCATGGCTTATTCCTTCACCTGATGcaca                                                   <  1:441217/275‑1 (MQ=255)                                                                                                                                                                                                                 aGCCGGCGCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGGGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCGGGAATTGATACCGCATGGTGGCTGGCGAGTTCAGGAAGCAGGTGCATGGCTTATTCCTTCACCTGATGcaca                                                   <  2:138316/274‑1 (MQ=255)                                                                                                                                                                                                                                   cccgCCCGGGTTTGCGGCTAAGGGAAGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCGGGAATTGATACCGCATGGTGGCTGGCGAGTTCAGGAAGCAGGTGCATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCAt                                <  1:49291/272‑1 (MQ=255)                                                                                                                                                                                                                                       cccTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACCTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCCGCCCGGGCATTGCAACCGCATGGTGGCTGGCGGGTTCAGGAAGCAGGTGCATGGCCTATTCCTTCACCTGATGCAACACCACGACCACCAAGCACTcgc                             >  2:483104/1‑274 (MQ=255)                                                                                                                                                                                                                                             ttggCGGCTAATGAACGCAAGGCTGTCCCCCCATGATTAAAAATTCGGCGTGTGTCCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCGGGAATTGATACCGCATGGTGGCTGGCGAGTTCAGGAAGCAGGTGCATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACg                      <  1:320514/272‑1 (MQ=255)                                                                                                                                                                                                                                                 aggCTAAGGCACGCAAGGCTGATACGCCATTATGAAAAATTCGGCTTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCGGGAATTGATACCGCATGGTGGCTGGCGAGTTCAGGAAGCAGGTGCATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGcac                   <  2:438163/273‑1 (MQ=255)                                                                                                                                                                                                                                                      aaGGCACGCAAGGCTGTCACGCCATGATTAAAAATACGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCCGCCTTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCCCGGGCATTGATACCGCATGGTGGCTGGCGAGTTCAGGAAGCATGTTCATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCAGCGGGGGAACGCACAACgga             >  1:383604/1‑274 (MQ=255)                                                                                                                                                                                                                                                       aGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCGGGAATTGATACCGCATGGTGGCTGGCGAGTTCAGGAAGCAGGTGCATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCa            <  2:379673/275‑1 (MQ=255)                                                                                                                                                                                                                                                              cAAGGCTGTCACGCAATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTGGCCTTTCATCCCGGCTGACGAGCAGCTCGGGAATTGATACCGCATGGTGGCTGGCGAGCTCAGGAAGCAGGTGCATGGCTTCTTCACTCACCTGATGCACAACACCGATAACCGATCCAACGCGGTACACCAACACGGCAacgact      >  1:438164/1‑273 (MQ=255)                                                                                                                                                                                                                                                                aGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCGGGAATTGATACCGCATGGTGGCTGGCGAGTTCAGGAAGCAGGTGCATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCgg   <  1:127494/275‑1 (MQ=255)                                                                                                                                                                                                                                                                 ggCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCGGGAATTGATACCGCATGGTGGCTGGCGAGTTCAGGAAGCAGGTGCATGGCTTATTCCTTCACCTGATGCACAACATGGATCACCGAGCCATCGCGGTAACGCACAACGGCAACCACGCGGt  >  1:374224/1‑275 (MQ=255)                                                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                                    CTGCGCTTTGTTCGCACAACAGGCAGCGGCGAGGCGGCAGTGAATAGTCGCGGCGGGAGAGAATTTCGCCTTCGGGCGTCAGGACATCGATATCCCATAACCGCCCGAGAGGATGACTATGTTCAAGCTCAATGGTGGCGAGCTTGAGGTCGCGAGCCGGGGCGGCAATGCTCAACATGCCCTCCGGCCCGCTGGCGGAAACCAGTGCAGCCTGCTCCTGAATTTGCCAGCCCTGTTTTGCGGCTAAGGCACGCAAGGCTGTCACGCCATGATTAAAAATTCGGCGTGTGACCTCGCTGTCTTTAATCGGCCCAGGCGCAACCACGGTAAAGGAGACCAGTGGAACAGGATGGCGCTTGAGCCAGACGTGTTGCCGTGCTTGCCTTTCATCCCGGCTGACGAGCAGCTCGGGAATTGATACCGCATGGTGGCTGGCGAGTTCAGGAAGCAGGTGCATGGCTTATTCCTTCACCTGATGCACAACATCGATCACCGAGCCATCGCGGTAACGCACAACGGCAACGACGCGGT  >  NC_000913/647579‑648109

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.