| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 470,035 | A→G | 7.7% | S389G (AGC→GGC) | mdlA → | putative multidrug ABC transporter ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 470,035 | 0 | A | G | 7.7% | 151.0 / 3.0 | 52 | S389G (AGC→GGC) | mdlA | putative multidrug ABC transporter ATPase |
| Reads supporting (aligned to +/- strand): ref base A (28/18); new base G (2/2); total (31/21) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.34e-01 | |||||||||||
TAACATTGTGGAACGTGGTAGTGCTGCGTACAGCCGTATTCGCGCGATGCTGGCGGAAGCGCCGGTGGTGAACGATGGTAGCGAACCCGTGCCGGAAGGGCGTGGCGAACTGGATGTAAATATTCACCAGTTCACGTATCCGCAGACTGACCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCACCCAGCAAGAGATTGAGCATGTCGCGCGGTTAGCCAGCGTACATGACGATATTTTGCGTCTACCGCAAGGTTACGATACAGAGGTGGGCGAGCGCGGTGTGATGCTT > NC_000913/469764‑470289 | tAACATTGTGGAACGTGGTAGTGCTGCGTACAGCCGTATTCGCGCGATGCTGGCGGAAGCGCCGGTGGTGAACGATGGTAGCGAACCCGTGCCGGAAGGGCGTGGCGAACTGGATGTAAATATTCACCAGTTCACGTATCCGCAGACTGACCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGc > 1:32016/1‑274 (MQ=255) ccaatgtagaagttGGTAGGGCTGCGTACAGCCGTACTCGCGCGATGCTGGCGGAAGCGCCGGTGGTGAACGATGGTAGCGAACCCGTGCCGGAAGGGCGTGGCGAACTGGATGTAAATATTCACCAGTTCACGTATCCGCAGACTGACCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAg < 1:160436/262‑1 (MQ=255) aaCGTGGTAGTGCTGCGTACAGCCGTATTCGCGCGATGCTGGCGGAAGCGCCGGTGGTGAACGATGGTAGCGAACCCGTGCCGGAAGGGCGTGGCGAACTGGATGTAAATATTCACCAGTTCACGTATCCGCAGACTGACCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATAtt < 2:32016/275‑1 (MQ=255) cgggggagggcggcGTACAGCCGTATTCGGGGGATGCTGGCGGAAGGGCCGGTGGGGAACGATGGTAGCGAACCCGTGCCGGAAGGGCGTGGCGAACTGGATGTAAATATTCACCAGTTCACGTATCCGCAGACTGACCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCg < 2:204505/263‑1 (MQ=255) cGTGGTAGTGCTGCGTACAGCCGTATTCGCGCGATGCTGGCGGAAGCGCCGGTGGTGAACGATGGTAGCGAACCCGTGCCGGAAGGGCGTGGCGAACTGGCTGTAAATATTCACCAGTTCACGTATCCGCAGACTGACCATCCTGCGCTGGAAAACGTCAATTTCGCCATGAAACCCGGTCCGATGCTGGGTATCTGCGGGCAGACTGCTTCCGGCAACAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACTTCCGCGAGGGGGATATTc > 1:84649/1‑274 (MQ=255) ggTAGTGCTGCGTACAGCCGTATTCGCGCGATGCTGGCGGAAGCGCCGGTGGTGAACGATGGTAGCGAACCCGTGCCGGAAGGGCGTGGCGAACTGGATGTAAATATTCACCAGTTCACGTATCCGCAGACTGACCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGGGGGGGagtgtcgct > 2:34289/1‑266 (MQ=255) tgctgcGTACAGCCGTATTCGCGCGATGCTGGCGGAAGCGCCGGTGGTGAACGATGGTAGCGAACCCGTGCCGGAAGGGCGTGGCGAACTGGATGTAAATATTCACCAGTTCACGTATCCGCCGACTGACCATCATGCGCTGGAAAACGCCAATTTCGCCCTGAAAACCGGTCACATGCTGGGTATCTCCCGGCCGACGGGGTCCGGCCAAAGTACCCTCTTGTCGCCCATTCAGCGTCCTTTCGACGTTATCGAGGGGGTATTTCGGTTTCCTg > 2:309259/1‑275 (MQ=255) ctgcGTACAGCCGTATTCGCGCGATGCTGGCGGAAGCGCCGGTGGTGAACGATGGTAGCGAACCCGTGCCGGAAGGGCGTGGCGAACTGGATGTAAATATTCACCAGTTCACGTATCCGCAGACTGACCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGCCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCCCTCATTCCGCGTCATTTCGCCGTCAGGGCGGGGGACTTTCGCGTTCATGat > 2:325450/1‑275 (MQ=255) cGTACAGCCGTATTCGCGCGATGCTGGCGGAAGCGCCGGTGGTGAACGATGGTAGCGAACCCGTGCCGGAAGGGCGTGGCGAACTGGATGTAAATATTCACCAGTTCACGTATCCGCAGACTGACCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGCTATTCGCTTTCATGATAtt > 1:71317/1‑275 (MQ=255) cGTACAGCCGTATTCGCGCGATGCTGGCGGAAGCGCCGGTGGTGAACGATGGTAGCGAACCCGTGCCGGAAGGGCGTGGCGAACTGGATGTAAATAGTCACCAGTTCACGTATCCGCAGACTGACCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCCGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACACTGTTGTCGCCCATTACGCGGCATTTCGACGTCAGCGAGGGGGGTATTCGCTTTCAGGAtttt > 1:251596/1‑275 (MQ=255) aGCCGTATTCGCGCGATGCTGGCGGAAGCGCCGGTGGTGAACGATGGTAGCGAACCCGTGCCGGAAGGGCGTGGCGAACTGGATGTAAATATTCACCAGTTCACGTATCCGCAGACTGACCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCCAACGTACCCTGTTGTCGCTCCTTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTTCCTTTCATGATATTCctt > 2:134778/1‑273 (MQ=255) gcgATGCTGGCGGAAGCGCCGGTGGTGAACGATGGTAGCGAACCCGTGCCGGAAGGGCGTGGCGAACTGGATGTAAATATTCACCAGTTCACGTATCCGCAGACTGACCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGGTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGGGGGGGAGATTCGCTTTCATGATATTCCTCCGACGAAGTTAc > 2:262593/1‑274 (MQ=255) aGCGCCGGTGGTGAACGATGGTAGCGAACCCGTGCCGGAAGGGCGTGGCGAACTGGATGTAAATATTCACCAGTTCACGTATCCGCAGACTGACCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATTTTCCTCTTGCGAAGTTACAACTCGATAgtcgcc > 2:484650/1‑270 (MQ=255) aGCGACGGTGGTGAACGATGGTAGCGAACCCGTGCCGGAAGGGCGTGGCGAACTGGATGTAAATATTCACCAGTTCACGTATCCGCAGACTGACCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAAACCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCAGGCAAAAGTACCATGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGTGAGGGGGCTATTCGCTTTCATGATATTCCTCTGACGAAGTTACACCGCGAGAGCt > 1:54616/1‑272 (MQ=255) gTGCCGGAAGGGCGTGGCGAACTGGATGTAAATATTCACCAGTTCACGTATCCGCAGACTGACCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGa > 2:100328/1‑271 (MQ=255) gCGTGGCGAACTGGATGTAAATATTCACCAGTTCACGTATCCGCAGACTGACCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCtttttt > 1:160490/1‑275 (MQ=255) gAACTGGATGTAAATATTCACCAGTTCACGTATCCGCAGACTGACCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGaca < 1:100328/274‑1 (MQ=255) cTGGATGTAAATATTCCCCCGTTCACGTATCCGCAGACTGACCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTAAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACtg < 2:498384/274‑1 (MQ=255) cTGGAGTTAAATACTCACCAGTTCACGTATCCGCAGACTGACCACCCTGCGCTGGAAAACGTCTATTGCGCCCTGAAGCCCGTTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGTGAGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGTTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACtg < 1:313837/274‑1 (MQ=255) tGGGTGTAAAGATTCCCCAGTTCACGTATCCGCAGGCTGACCAACCTGCGCTGGAAAACGGCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACtgtg < 2:71317/275‑1 (MQ=255) ttCACCAGTTCACGTATCCGCAGACTGACCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGCTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCTTGATATTCCTCTGACGACGTTACCACTCGATAGCTGGCGTAGCCTCCTGGCGGTCGTTCGCCCGACGCCATTCCTTTTTTCCGACCCTGTGGCGAATAACAt > 2:165541/1‑274 (MQ=255) cACCATGTCACGTATCCGCTGACTGACCATCCTGGGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCATATGCTGGGTATCTGCGTGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATcgc < 2:54616/275‑1 (MQ=255) tATCCGCAGACTGACCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCGCGCTGGGTTGccc < 1:262593/275‑1 (MQ=255) aCTGACCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCCCGCTGGGTTGCCCGAATGCCAc > 2:230151/1‑275 (MQ=255) gtGACCATCCTGCGCTGGAAAACTTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCAcc < 2:84649/274‑1 (MQ=255) cTGACCATCCGGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGGCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCAGGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCAcc < 2:113877/275‑1 (MQ=255) aCCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGCCACTCTGGCGAATAACATCGCGCTGGGTTGCCCGAGTGCCAccacg > 2:317265/1‑272 (MQ=255) aCCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCCTGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACCCTGGGGCGAATAAAACCCGCCTGGGTCTCCCGACTGcccccccg > 2:275943/1‑273 (MQ=255) ccATCCCGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATGCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCACCCAGc < 2:166781/275‑1 (MQ=255) cTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTTTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCACCCAGCagggg > 1:401691/1‑271 (MQ=255) cTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTTGCGAATAACATCGCGCTGGGTTGCCCGAATGCCACCCAGCAagag > 2:201126/1‑275 (MQ=255) aTTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACTTCAGCGAGGGGGATATTCGCATTCATGATCTTCCTCTGCCGAAGTTACAACTCGATAGCTGGCGTAGCCGACTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCGTACACTGTGGCGCATAACATCGCGCGTGGTTGCCCGACTCCCACCCACAAAGAGATTGAGCCTGACGCGCgg > 1:474163/1‑275 (MQ=255) aTTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGCCGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGCCGCCATTCCTTTTTTTTGACACTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCACCCAGCAAGAGATTGAGAATGTCGCGCgg > 2:134328/1‑275 (MQ=255) aTGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCTAATAACATCCCGCTGGTCTGCCCGAATGCCCCCCCACCAGAGCTTGAGACGGTCGCGGCGTTCGCCCGCGTACATGACGaaat > 1:68962/1‑275 (MQ=255) ggTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCACCCAGCAAGAGATTGAGCAt > 2:456088/1‑237 (MQ=255) tCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCGGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCACCCAGCAAGAGATTGAGCATGTCGCGCGGTTAGCCAGCGTACATGACGATATTTTGCGTCtc > 2:144990/1‑274 (MQ=255) tCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCACCCAGCAAGAGATTGAGCATGTcg < 1:456089/237‑1 (MQ=255) tCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCACCCAGCAAGAGATTGAGCATGTCGCGCGGTTAGCCAGCGTACATGACGATATTTTGCGTCTa > 1:128418/1‑275 (MQ=255) tCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCACCCAGCAAGAGATTGAGCATGTCGCGCGGTTAGCCAGCGTACATGACGATATTTTGCGTCTa > 1:142616/1‑275 (MQ=255) cTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTCGTTAGCCAGACGCAATTCCTTTTTTCTGACACTGTGGCGAATAACATCGGCCTGGATTGCCGGAATTCCACCGAGCCAGAGATAAAGAATGTCGCGCGGTTGGGAAGCGTACTTGACGACGTTTTGCGTCTa > 1:178485/1‑274 (MQ=255) gggcggcattgTTCCTGCAAAAGTACCCTTTTGTCGCTGCTTCAGCGTCATTTCGACGTGCGCGAGGGGGATATTCGCTGTCAGGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCACCCAGCAAGAGATTGAGCATGTCGCGCGGTTAGCCAGCGTACATGACGATATTTTGCGTCTACCGc < 2:496160/264‑1 (MQ=255) gggCCGTGTGGGTACGGCAGAAGTACCCTGTTGTCGCTCATTCGGCGCCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCAGGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCACCCAGCAAGAGATTGAGCATGTCGCGCGGTTAGCCAGCGTACATGACGATATTTTGCGTCTACCGc < 2:343810/274‑1 (MQ=255) gggCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCGGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCACCCAGCAAGAGATTGAGCATGTCGCGCGGTTAGCCAGCGTACATGACGATATTTTGCGTCTACCGc < 1:144990/274‑1 (MQ=255) ggCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCACCCAGCAAGAGATTGAGCATGTCGCGCGGTTAGCCAGCGTACATGACGATATTTTGCGTCTACCGCaa < 1:364972/275‑1 (MQ=255) ggCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCACCCAGCAAGAGATTGAGCATGTCGCGCGGTTAGCCAGCGTACATGACGATATTTTGCGTCTACCGCaa > 1:229704/1‑275 (MQ=255) gatgggTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCAGTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCACCCAGCAAGAGATTGAGCATGTCGCGCGGTTAGCCAGCGTACATGACGATATTTTGCGTCTACCGCAAGGt < 1:134778/270‑1 (MQ=255) ccGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCACCCAGCAAGAGATTGAGCATGTCGCGCGGTTAGCCAGCGTACATGACGATATTTTGCGTCTACCGCAAGGTTACGATAc < 2:142616/274‑1 (MQ=255) gCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCGGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGc > 2:201606/1‑190 (MQ=255) aaGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCGGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCAcc < 1:201606/190‑1 (MQ=255) cTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCACCCAGCAAGAGATTGAGCATGTCGCGCGGTTAGCCAGCGTACATGACGATATTTTGCGTCTACCGCAAGGTTACGATACAGAGGTGGGCGAgcg < 2:128418/275‑1 (MQ=255) gCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCACCCAGCAAGAGATTGAGCATGTCGCGCGGTTAGCCAGCGTACATGCAGATATTTTGCGTCTACCGCAAGGTTACGATACAGAGGTGGGCGAGCGCGGGGTGa > 2:449542/1‑275 (MQ=255) ttCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACCCTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCACCCAGCAAGAGATTGAGCATGTCGCGCGGTTAGCCAGCGTACATGACGATCTTTTGCGTCTCCCGCCAGGGTACGACACAGCGGTGGGCGAGCGCTGTGGGCTGCtt > 1:424896/1‑275 (MQ=255) | TAACATTGTGGAACGTGGTAGTGCTGCGTACAGCCGTATTCGCGCGATGCTGGCGGAAGCGCCGGTGGTGAACGATGGTAGCGAACCCGTGCCGGAAGGGCGTGGCGAACTGGATGTAAATATTCACCAGTTCACGTATCCGCAGACTGACCATCCTGCGCTGGAAAACGTCAATTTCGCCCTGAAACCCGGTCAGATGCTGGGTATCTGCGGGCCGACTGGTTCCGGCAAAAGTACCCTGTTGTCGCTCATTCAGCGTCATTTCGACGTCAGCGAGGGGGATATTCGCTTTCATGATATTCCTCTGACGAAGTTACAACTCGATAGCTGGCGTAGCCGCCTGGCGGTAGTTAGCCAGACGCCATTCCTTTTTTCTGACACTGTGGCGAATAACATCGCGCTGGGTTGCCCGAATGCCACCCAGCAAGAGATTGAGCATGTCGCGCGGTTAGCCAGCGTACATGACGATATTTTGCGTCTACCGCAAGGTTACGATACAGAGGTGGGCGAGCGCGGTGTGATGCTT > NC_000913/469764‑470289 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |