New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 412544555 (1.090)4 (0.080) 3/464 NT 6.7% coding (1365/2199 nt) priA Primosome factor n' (replication factor Y)
?NC_000913 = 4125677 59 (1.230)coding (1133/2199 nt) priA Primosome factor n' (replication factor Y)

CCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCGTGCTCTTCATCAATGACAATCACGCCGAGATTTTTAAACGGCGTAAACAGCGCGGAGCGGGTGCCGATCACAATCGCCGCCTCACCATTTTTCGCTTTCAGCCACGCCGAAAGACGCT  >  NC_000913/4125396‑4125959
                                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                          
ccGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGtcaggc                                                                                                                                                                                                                                                                                      <  1:80341‑M2/288‑7 (MQ=255)
        tGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGc                                                                                                                                                                                                                                                                             <  2:19109/289‑1 (MQ=255)
                    tggtggCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTct                                                                                                                                                                                                                                                                 >  2:461903/1‑289 (MQ=255)
                         gCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTgg                                                                                                                                                                                                                                                            >  2:348462/1‑289 (MQ=255)
                           aGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGa                                                                                                                                                                                                                                                           <  2:314460/288‑1 (MQ=255)
                              gcAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGAc                                                                                                                                                                                                                                                          <  2:367630/286‑1 (MQ=255)
                                                       cGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCTTAACGTTTCCAGCGCGGGCGtt                                                                                                                                                                                                                              >  1:259952/1‑289 (MQ=255)
                                                       cGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCACTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGtt                                                                                                                                                                                                                              >  1:102452/1‑289 (MQ=255)
                                                        gtggAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCg                                                                                                                                                                                                                                <  2:441625/286‑1 (MQ=255)
                                                                   aTCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGc                                                                                                                                                                                                                            <  1:324508/279‑1 (MQ=255)
                                                                   aTCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGc                                                                                                                                                                                                                            >  2:324508/1‑279 (MQ=255)
                                                                   aTCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGa                                                                                                                                                                                                                  >  2:69146/1‑289 (MQ=255)
                                                                     cGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCg                                                                                                                                                                                                                           >  1:370586/1‑278 (MQ=255)
                                                                     cGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCg                                                                                                                                                                                                                           <  2:370586/278‑1 (MQ=255)
                                                                     cGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGaat                                                                                                                                                                                                                >  2:273789/1‑289 (MQ=255)
                                                                      gCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGaata                                                                                                                                                                                                               <  2:80341/289‑1 (MQ=255)
                                                                          cGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCg                                                                                                                                                                                                           >  1:419521/1‑289 (MQ=255)
                                                                             gggCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGCGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGGATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGGGGCGCCTAGacttatgggtc                                                                                                                                                                                                        >  1:448678/1‑279 (MQ=255)
                                                                                                cacaGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCa                                                                                                                                                                                       <  1:69146/287‑1 (MQ=255)
                                                                                                               gcagTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTc                                                                                                                                                                      >  2:206771/1‑289 (MQ=255)
                                                                                                                 agTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTc                                                                                                                                                                      <  2:35174/287‑1 (MQ=255)
                                                                                                                   tGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGGGTTGCGGAGCCATGAATACTCGGGGCTTGCTCTCTTTGCGAACGGTACCCCCCCATGTcccgc                                                                                                                                                                  >  1:40894/1‑288 (MQ=255)
                                                                                                                        gcgcAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATg                                                                                                                                                             >  2:268094/1‑289 (MQ=255)
                                                                                                                          gcAAAGCCACGGCGGTGAAGAAAGAGAATGACCTGTTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTACAGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGa                                                                                                                                                            <  2:244027/288‑1 (MQ=255)
                                                                                                                                  aCGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGtcaggcgcagcaccatctgcgctgccaccactgtgacagtcagcgtccggtgccgcgccagtgcccttcctgcggttccacgcccctggtccccgtggggctgggccccgaaccgctttaaccggccctcccgccct                                                                                                                                                   <  1:34818‑M2/289‑138 (MQ=255)
                                                                                                                                  aCGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGtcaggcgcagcaccatctgcgctgccaccactgtgacagtcagcgtccggtgccgcgccagtgcccttcctgcggctccccgcacctggtccccgtcgggctgggccccgaccagcttgaacagacgctcgcgccgt                                                                                                                                                   <  1:402596‑M2/289‑138 (MQ=255)
                                                                                                                                          tAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCctg                                                                                                                                           <  2:212267/289‑1 (MQ=255)
                                                                                                                                          tAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCct                                                                                                                                            >  2:437136/1‑288 (MQ=255)
                                                                                                                                               aagaGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCctgctg                                                                                                                                        <  2:259952/287‑1 (MQ=255)
                                                                                                                                                   gaATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGt                                                                                                                                   <  1:437136/288‑1 (MQ=255)
                                                                                                                                                   gaATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGt                                                                                                                                   <  2:40894/288‑1 (MQ=255)
                                                                                                                                                                  cAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGGTCGCACGATACACCGCCCGGTTGAGGGCATGATCGCGCCCGCCTTCCTGCTGCTTGTATGTGCTGTCGttcct                                                                                                                   >  1:333253/1‑285 (MQ=255)
                                                                                                                                                                   aGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACCTGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGTGTCAGGCGCAGCAGGCGGTATTTTTTCTTCTGGACGTTGCATAACGTTTCCAGCGGGGGCGTTGCGGAGCCAAGGATCATCGGGATTTGCTCGCTTTCCGCACGCTACACCGCCAGGTCGCGGGCACGCAAGCGCCCGCCTCCCTGCCGCTTGTAGGGGCTGTCGTGctct                                                                                                                  >  1:476293/1‑289 (MQ=255)
                                                                                                                                                                      cTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCGTGCTCTtca                                                                                                               <  2:419521/289‑1 (MQ=255)
                                                                                                                                                                      cTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTCGAATTGCCGGACGCGCATTCCCTGCCCGACGGGtcaggcgcagcaccatctgcgctgccaccactgtgacagtcagcgtccggtgccgcgccagtgcccttcctgcggttccacgcacctggtccccgtggggctgggcaccgaacagcttgaacagacgctcgcgccgttgttccccggcgtgcccatttctcgtatcgacc                                                                                                                  >  2:34818‑M2/1‑116 (MQ=255)
                                                                                                                                                                       tGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGCTTCGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTCCCTGCTGCCTGTAGGAGCTGTCGTTGTCTtca                                                                                                               >  1:119298/1‑288 (MQ=255)
                                                                                                                                                                       tGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCGTg                                                                                                                      <  2:37853/281‑1 (MQ=255)
                                                                                                                                                                       tGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCGTGCTCTtcat                                                                                                              <  1:461903/289‑1 (MQ=255)
                                                                                                                                                                       tGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCGTGCTCTtca                                                                                                               >  1:61511/1‑288 (MQ=255)
                                                                                                                                                                                 ggCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCCGCCTTCCTGCCGCGCGTGGGAGCAGTCGTGCCCTtcatca                                                                                                            >  1:37853/1‑281 (MQ=255)
                                                                                                                                                                                 ggCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCGTGCTCTTCATCAATGACaa                                                                                                     >  2:364305/1‑288 (MQ=255)
                                                                                                                                                                                       tACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCg                                                                                                                        <  1:207741/263‑1 (MQ=255)
                                                                                                                                                                                       tACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCg                                                                                                                        >  2:207741/1‑263 (MQ=255)
                                                                                                                                                                                         cGATTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCGTGCTCTTCATCAATGACAATCACGCCga                                                                                            <  2:448678/289‑1 (MQ=255)
                                                                                                                                                                                         cGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGtcaggcgcagcaccatctgcgctgccaccactgtgacagtcagcgtccggtgccgcgccagtgcccttcctgcggttccacgcacctggtccccgtggggctgggcaccgaacagcttgaacagacgctcgcgccgttgttccccggcgtgcccatttctcgtatcgaccgcgataccaccagccgcaaagg                                                                                            >  2:402596‑M2/1‑97 (MQ=255)
                                                                                                                                                                                         cGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCGTGCTCTTCATCAATGACAATCACGCCga                                                                                            <  2:333253/289‑1 (MQ=255)
                                                                                                                                                                                                  aaCGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCGTGCTCTTCATCAATGACAATCACGCCGAGATTTTTaa                                                                                   <  1:364305/289‑1 (MQ=255)
                                                                                                                                                                                                    cGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCGTGCTCTTCATCAATGACAATCACGCCGAGATTTTTAAAc                                                                                 <  2:61511/289‑1 (MQ=255)
                                                                                                                                                                                                      ccGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCGTg                                                                                                                      <  2:317550/250‑1 (MQ=255)
                                                                                                                                                                                                                  ctgcctgcACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCGTGCTCTTCATCAATGACAATCACGCCGAGATTTTTAAACGGCGTAAACAgcgc                                                                   <  1:268094/289‑1 (MQ=255)
                                                                                                                                                                                                                            cTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCGTGCTCTTCATCAATGACAATCACGCCGAGATTTTTAAACGGCGTAAACAGCGCGGAGCGGGTg                                                         <  1:206771/289‑1 (MQ=255)
                                                                                                                                                                                                                              tCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAg                                                                                                                              <  1:390276/218‑1 (MQ=255)
                                                                                                                                                                                                                              tCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAg                                                                                                                              >  2:390276/1‑218 (MQ=255)
                                                                                                                                                                                                                                      tttAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCGTGCTCTTCATCAATGACAATCACGCCGAGATTTTTAAACGGCGTAAACAGCGCGGAGCGGGTGCCGATccca                                                >  1:19171/1‑288 (MQ=255)
                                                                                                                                                                                                                                       ttAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGCCGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCGTGCTCTTCATCAATGACAATCACGCCGAGATTTTTAAACGGCGTAAACAGCGCGGAGCGGGTGCCGATCACAAt                                              <  2:476293/289‑1 (MQ=255)
                                                                                                                                                                                                                                       ttAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCGTGCTCTTCATCAATGACAATCACGCCGAGATTTTTAAACGGc                                                                              <  2:347134/257‑1 (MQ=255)
                                                                                                                                                                                                                                                 cacaTGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCGTGCTCTTCATCAATGACAATCACGCCGAGATGTTTAAACGGCGTAAACAGCGCGGAGGGGGTGCCGATCACAAGCGCCGCCTc                                     >  2:40666/1‑288 (MQ=255)
                                                                                                                                                                                                                                                 cacaTGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTCCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCGTGCTCTTCATCAATGACAATCACGCCGAGCTTTTTAACCGGCTTAAATCGCCCGGAGCTGGTCCCGACCACAATCGCCGCCTc                                     >  1:203751/1‑288 (MQ=255)
                                                                                                                                                                                                                                                    aTGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCGTGCTCTTCATCAATGACAATCACGCCGAGACTTTTACACGGCGTAAACAGCGCGGATCGGGTGCCGACCACAATCGCCGCCTCAcc                                  >  1:62273/1‑288 (MQ=255)
                                                                                                                                                                                                                                                              gCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTgcg                                                                                                                                                                                         <  1:468035/127‑1 (MQ=255)
                                                                                                                                                                                                                                                              gCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTgcg                                                                                                                                                                                         >  2:468035/1‑127 (MQ=255)
                                                                                                                                                                                                                                                               ccGGACGCTCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATTCGGATTTGATCGCTGTGCGCACGATACAACGCCAGGTCGCGGGCATGATAGCTCCCGCCTTCCTGCTGCTGGCAGGAGCCGTCGTGCTCTTCATCAATGACACTCCCGCCGAGATTTTTAAACGGCGTAACAAGCCCGGAGCGGGTACCGATCACACTTGCCGACTCCCCCTTTTTccgttt                      >  1:439299/1‑284 (MQ=255)
                                                                                                                                                                                                                                                               ccGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCGTGCTCTTCATCAATGACAATCACGCCGAGATTTTTAAACGGCGTAAACAGCGCGGAGCGGGTGCCGATCACAATCGCCGCCTCACCATTTTTCGCtt                       >  2:378442/1‑288 (MQ=255)
                                                                                                                                                                                                                                                               ccGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCGTGCTCTTCATCAATGACAATCACGCCGAGATTTTTAAACGGCGTAAACAGCGCGGAGCGGGTGCCGATCACAATCGCCGCCTCACCATTTTTCGCtt                       >  2:143443/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                   cGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCGTGCTCTTCATCAATGACAATCACGCCGAGATTTTTAAACGGCGTAAACAGCGCGGAGCGGGTGCCGATCACAATCGCCGCCTCACCATTTTTCGCTTTCAGCCACGCCGAAAGAcgct  <  2:19171/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                          
CCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCTGTAAATGCTGGCGCATACGAGTGATTAACGCCGGAGCCAGACCTGCCTGCACCTTCTGACCTTTTAAATCCAGCACATGTTGAATTGCCGGACGCGCATTCCCTGCCCGACGGGTCAGGCGCAGCAGGCGGTATTTTTTCTGCTGGACGTTGCATAACGTTTCCAGCGCGGGCGTTGCGGAGCCAAGAATAATCGGGATTTGCTCGCTGTGCGCACGATACACCGCCAGGTCGCGGGCATGATAGCGCCAGCCTTCCTGCTGCTTGTAGGAGCTGTCGTGCTCTTCATCAATGACAATCACGCCGAGATTTTTAAACGGCGTAAACAGCGCGGAGCGGGTGCCGATCACAATCGCCGCCTCACCATTTTTCGCTTTCAGCCACGCCGAAAGACGCT  >  NC_000913/4125396‑4125959

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.