New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1068445 =94 (1.210)4 (0.050) 4/266 11.2 4.0% noncoding (92/98 nt) RIP92 (repetitive extragenic palindromic) element, contains 2 REP sequences and 1 IHF site RIP92 (repetitive extragenic palindromic) element, contains 2 REP sequences and 1 IHF site
?NC_000913 4027382 = 103 (1.400)noncoding (62/281 nt) REP291 (repetitive extragenic palindromic) element, contains 6 REP sequences REP291 (repetitive extragenic palindromic) element, contains 6 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAA  >  NC_000913/1068304‑1068584
                                                                                                                                             |                                                                                                                                           
ccATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCAt                                                                                                                                            >  2:565096/1‑143 (MQ=255)
 caccACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATc                                                                                                                                           <  2:781319/140‑1 (MQ=255)
  aTCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATcc                                                                                                                                          >  1:1204478/1‑143 (MQ=255)
   tCACCGGCGGTTACCCTGTGGTTGATATTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCg                                                                                                                                         <  2:179601/143‑1 (MQ=255)
     aCCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc                                                                                                                                       <  2:697555/143‑1 (MQ=255)
     aCCGCCGGTTACCCGGCGGTTGATACTTATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc                                                                                                                                       >  2:1349108/1‑143 (MQ=255)
         ccgGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGa                                                                                                                                   <  1:828366/143‑1 (MQ=255)
             ttACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGTCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACaa                                                                                                                               <  1:781735/143‑1 (MQ=255)
               aCCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATg                                                                                                                             <  1:53142/143‑1 (MQ=255)
               aCCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATg                                                                                                                             <  2:488347/143‑1 (MQ=255)
                 ccGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCCATATATTGAATCTGCACTGTTTTGTAGGCCGGATAAGGAGCTTACGCCGCATCCGGCATGGACAATCCg                                                                                                                           >  1:377687/1‑143 (MQ=25)
                    gtggtgGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTAc                                                                                                                        <  1:545207/143‑1 (MQ=255)
                     tggtTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATCAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACg                                                                                                                       >  1:1218966/1‑143 (MQ=255)
                        gtGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTg                                                                                                                    <  2:904424/142‑1 (MQ=255)
                          gATACTGATGACAAATGTGAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTc                                                                                                                  <  1:86396/143‑1 (MQ=255)
                            ttgtgatgaCAAATGTAAGGTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTGGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTcaa                                                                                                                <  1:701572/140‑1 (MQ=255)
                              cTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTGGTAGGCCGGACAAGGCGTTTACGCCGCATCCGGCATGAACAACGCGTCCGTTGGcaaca                                                                                                              >  1:667211/1‑143 (MQ=21)
                               tgatgaCAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCTTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTcaacaa                                                                                                             >  1:1084519/1‑143 (MQ=255)
                               tgatgaCAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTcaacaa                                                                                                             >  2:260761/1‑143 (MQ=255)
                               tgatgaCAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAACGCGTACGTTGTcacaca                                                                                                             >  1:716773/1‑139 (MQ=255)
                                 atgaCAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATc                                                                                                           <  1:409173/143‑1 (MQ=255)
                                  tgaCAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCt                                                                                                          <  1:585474/143‑1 (MQ=255)
                                  tacgaagtGTAAACTTGCCTGCTGCGCGATGCTTTTCAGGCCTACCAGAAGCTTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCt                                                                                                          <  1:528502/136‑1 (MQ=21)
                                   gaCAAATGTACGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTg                                                                                                         <  2:950866/143‑1 (MQ=255)
                                   gaCAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGGTTGCAATATATTGAATTTGCGGTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATACGGCATGAACAATGCGTGCGTTGTCAACAGTCTg                                                                                                         >  2:72367/1‑143 (MQ=21)
                                      aaaTGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATCTTGCACTTGCACTGTTTTGTAGGCCGGAAAAGGCGTCACCAGCGGATCGGGCAAGAACAAGACGTACGATGAcaaccacccgcgg                                                                                                      >  1:995348/1‑134 (MQ=255)
                                      aaaTGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCAc                                                                                                      >  1:746073/1‑143 (MQ=255)
                                        aTGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCAccg                                                                                                    >  2:528465/1‑143 (MQ=255)
                                         tGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACTAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCAccgc                                                                                                   <  2:352665/143‑1 (MQ=255)
                                           ttaGCTGGCCTGGGGCGCTATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCAccgccg                                                                                                 <  1:46374/141‑1 (MQ=255)
                                           gaaGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTGGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCAccgccg                                                                                                 <  2:84913/142‑1 (MQ=255)
                                                  gCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTGCGTTGTCAACAATCTGCACCGCCGGTAAccc                                                                                          >  2:75089/1‑143 (MQ=255)
                                                  gCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGCTAAccc                                                                                          >  1:1202758/1‑143 (MQ=255)
                                                   ccTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTaagcac                                                                                         >  2:364544/1‑139 (MQ=255)
                                                     tGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATAAAGAATGCGTACGTTGTCAACAATCTGCACCGCAGATAACCAcgg                                                                                       >  1:308482/1‑143 (MQ=18)
                                                      gATGCGCGATGCTTATCACGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCcggc                                                                                      <  1:879447/143‑1 (MQ=255)
                                                            cgATGCTTATCAGGCCTACCAGAAGGTTGCAATATATTGAGTTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGtttt                                                                                <  1:1345520/143‑1 (MQ=255)
                                                            cgATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGtttt                                                                                <  1:483166/143‑1 (MQ=255)
                                                            cgATGCTTATCAGGCCTACCAGAAGATTGCAAGATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGTGGtttt                                                                                <  2:1108884/143‑1 (MQ=255)
                                                             gATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGACGGtctta                                                                               >  1:442952/1‑142 (MQ=255)
                                                              gtGCTTATCAGGCGTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCt                                                                              <  1:890227/142‑1 (MQ=255)
                                                              aggCTTATCAGGCCTCCCAGAAGGTTGCAAGATATTGCATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACTCCGCAGCCGGCAGGAACAATGCGTCCGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCt                                                                              <  1:1258541/141‑1 (MQ=25)
                                                              aTGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCt                                                                              <  2:1146752/143‑1 (MQ=255)
                                                                 cTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTATAGGCCGGATAAGGCGTGTAATCAGCGTCCAGCATGCACAATGCGTACGTTGTGAACACACCACGCCGCCGCCAACCCCGGCGGGTTCCtcac                                                                           >  1:692222/1‑140 (MQ=16)
                                                                   tATCAGGCCTACCAGCAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTa                                                                         <  1:453795/143‑1 (MQ=255)
                                                                   tATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACACCGGCGGTTTTCTGTTTa                                                                         >  2:675551/1‑143 (MQ=255)
                                                                     tCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTAAACACTTCGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATg                                                                       >  2:1274231/1‑143 (MQ=255)
                                                                        ggCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGAAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCt                                                                    >  2:929383/1‑143 (MQ=255)
                                                                          ccTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGCCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAGCCCCGGCGGTTTTCTGGTTATCGCTcc                                                                  >  1:158607/1‑143 (MQ=255)
                                                                           cTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCt                                                                 >  2:48462/1‑143 (MQ=255)
                                                                               cAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCCCCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCtggtg                                                             >  1:246052/1‑143 (MQ=255)
                                                                               cAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCtgatg                                                             >  2:796662/1‑143 (MQ=255)
                                                                               cAGAAGATGGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAAGCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCtgatg                                                             <  2:1293314/143‑1 (MQ=255)
                                                                                 gaagaTTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGCTCGGGACTTGCTGCCTCATCCGGACTTCTCCATCCTTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGaa                                                           <  1:1316829/143‑1 (MQ=25)
                                                                                 gaagaTTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGaa                                                           >  2:1240873/1‑143 (MQ=255)
                                                                                  aagaTTGCAATATATTGAATTTGCACTGTTTTGTAGGACGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGCTTTCTGTTTATCGCCCCTGATGaac                                                          >  1:187641/1‑143 (MQ=255)
                                                                                          aaTATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTg                                                  >  2:48182/1‑143 (MQ=255)
                                                                                           atatatTGAATGTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTgg                                                 <  2:810629/143‑1 (MQ=255)
                                                                                            tatatTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTACTGTTTATGGCCCCTGATGACCACCTTCTGGc                                                >  1:1155080/1‑143 (MQ=255)
                                                                                             atatTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCg                                               >  1:1299941/1‑143 (MQ=255)
                                                                                               atTGAATTTGCACTGTTTGGTAGGCCGGAGAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGt                                             <  1:65616/143‑1 (MQ=255)
                                                                                                ttGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTg                                            >  2:862733/1‑143 (MQ=255)
                                                                                                ttGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTGTTCTGTTTATGGCTCATGATGAAGAACTTCTGGCGGTg                                            >  2:1017260/1‑143 (MQ=255)
                                                                                                 tGAATTTGCACTGTTTTGTAGGCCGGATAAGTCGTTGACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTgg                                           >  2:999452/1‑143 (MQ=255)
                                                                                                  gAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGa                                          <  2:524016/143‑1 (MQ=255)
                                                                                                   aaTTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGaa                                         <  1:932701/143‑1 (MQ=255)
                                                                                                       tGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTc                                     <  1:1349108/143‑1 (MQ=255)
                                                                                                        gCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTca                                    <  2:86131/143‑1 (MQ=255)
                                                                                                            tGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGACCGTcaaccc                                >  1:551307/1‑142 (MQ=255)
                                                                                                            tGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGGGGAACGTcaaccc                                >  1:653968/1‑142 (MQ=255)
                                                                                                             ggtgggtgggCCGGAGACGGGGTTGGCGCCGCATCCGGCATGAACAATGTGTGCGTTGTCAACTATCTGCGCCGCGGGTAACCCCGGCGGTTGTCTGTTTATGGGTCCTGATGAACGACTTCTGGCGGTGGAACGTcaaccaa                               <  1:438565/135‑1 (MQ=255)
                                                                                                              ttttGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACTATCTGCACCGCCGGTAACCCCGACGATTTTCTGTATATGGATACTGATAAACAACTTCTGGCAGTGGAACGTcaaccaac                              >  2:822325/1‑143 (MQ=37)
                                                                                                              ttttGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTcaaccaac                              >  2:1354681/1‑143 (MQ=255)
                                                                                                              ttttGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCAGGCGGTTATCTGTTTATGGCTCATGATGAACAAAACCTGGGGTTGAAACGTcaaccaac                              >  2:838403/1‑143 (MQ=25)
                                                                                                                  gTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTc                          <  2:1302177/143‑1 (MQ=255)
                                                                                                                   tAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGAGGAACGTCAACCAACTTTCt                         >  2:1079751/1‑143 (MQ=255)
                                                                                                                    agggggggtgaGGCGTTTACGCCGCAGCCGGCATGAACAATGCGTACGGTGTCAACAATCTGCGCCGCCGGTAACCCCGGGGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTg                        <  1:272882/133‑1 (MQ=255)
                                                                                                                     ggCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGc                       >  2:473871/1‑143 (MQ=255)
                                                                                                                      gCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCGCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGACCGTCAACCAACTCTCTGCt                      >  2:728607/1‑143 (MQ=255)
                                                                                                                      gCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGGGGAGCGTCAACCAACTTTCTGCt                      >  2:760491/1‑143 (MQ=255)
                                                                                                                      gCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTCGTCTGTTTATGGCACCTGATGAACAACTGCTGGCGGTGGAACGTCAACGAACTtgctgcc                      >  1:842752/1‑142 (MQ=38)
                                                                                                                        cGGACAAGGCGTGTACTCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCCGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTa                    <  2:506336/143‑1 (MQ=255)
                                                                                                                          gATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTaac                  >  1:727750/1‑143 (MQ=255)
                                                                                                                           aTAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTaaca                 >  2:528431/1‑143 (MQ=255)
                                                                                                                              aGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACg              <  1:929383/143‑1 (MQ=255)
                                                                                                                                  gTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCAtt          <  2:85493/143‑1 (MQ=255)
                                                                                                                                   tttACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTg         <  2:1299941/143‑1 (MQ=255)
                                                                                                                                    tcaCGCCGGATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGa        <  1:644000/141‑1 (MQ=255)
                                                                                                                                    atACGCCGCATTCGGTATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGTTTAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGa        <  1:1105375/142‑1 (MQ=255)
                                                                                                                                      aCGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCCGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGCAACGTCAGCCAACTTTCTGCTTAACAACGTAtagcgt      >  2:963079/1‑138 (MQ=255)
                                                                                                                                       cgccgcATCCGGCATGAACGATGCGTACGTTGTCAACAATCTGCGACAAATTTGTCCCCTGTGGTTTTATGTCTATGGCTCCTGATGAACAACCTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTa     <  1:1316445/143‑1 (MQ=25)
                                                                                                                                        gccgcATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTaa    >  2:731107/1‑143 (MQ=255)
                                                                                                                                          cgcATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGTACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTaaaa  <  1:399908/143‑1 (MQ=255)
                                                                                                                                          cgcATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTgaaa  >  2:1225853/1‑143 (MQ=255)
                                                                                                                                             |                                                                                                                                           
CCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCATGAACAATGCGTACGTTGTCAACAATCTGCACCGCCGGTAACCCCGGCGGTTTTCTGTTTATGGCTCCTGATGAACAACTTCTGGCGGTGGAACGTCAACCAACTTTCTGCTTAACAACGCATTGAGTAAAA  >  NC_000913/1068304‑1068584

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.