BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,978,503	Δ776 bp		insB1–insA	insB1, insA

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1978503–1979270	1979278	9–776	109 [0]	[0] 109	insB1–insA	insB1, insA

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1978502	0 (0.000)	103 (1.410)	78/264	0.0	100%	intergenic (‑305/+16)	flhD/insB1	flagellar class II regulon transcriptional activator, with FlhC/IS1 transposase B
*	?	NC_000913	1979279 =	0 (0.000)	103 (1.410)	78/264	0.0	100%	intergenic (‑64/‑474)	insA/uspC	IS1 repressor TnpA/universal stress protein

Only 100 of 109 total aligned reads displayed.

GTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCG  >  NC_000913/1978363‑1978643

ttcTTTATACTTATCTAAGATTTTTCATAAATAGATGCAACTGTACTCGTCACTACACGCACATATAACAAAGGGGAGATGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtat                                                                                                                                            <  1:621579‑M1/142‑4 (MQ=255)

   tttACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTCTCAATAATCCGCGATGCAGACCACACAACACACTCAATTACTTAACATAAATGtataag                                                                                                                                         >  1:597403‑M1/1‑137 (MQ=255)

   ttcacacttaTCTAAGACTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataag                                                                                                                                         <  2:397201‑M1/140‑7 (MQ=255)

   cttaCACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataag                                                                                                                                         <  2:397260‑M1/142‑7 (MQ=255)

    ttACACTTATCTAAGATTGTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagt                                                                                                                                        <  2:329567‑M1/143‑8 (MQ=255)

     tACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtc                                                                                                                                       >  2:369190‑M1/1‑135 (MQ=255)

     tACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagta                                                                                                                                       >  2:847338‑M1/1‑135 (MQ=255)

         cTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatac                                                                                                                                   <  1:298602‑M1/143‑13 (MQ=255)

         cTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatac                                                                                                                                   <  1:194333‑M1/143‑13 (MQ=255)

          ttATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatact                                                                                                                                  >  2:403583‑M1/1‑130 (MQ=255)

          ttATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatact                                                                                                                                  <  2:493323‑M1/143‑14 (MQ=255)

          ttATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACACACTGACAACGGAGGGGGGCTGCGATTTCCAATAATGCGTGATGCCGATGACTCAAAACACTCAATTACTTAACATAAATGtataagtcatgct                                                                                                                                  >  2:845352‑M1/1‑130 (MQ=255)

               tAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgt                                                                                                                             >  2:430083‑M1/1‑125 (MQ=255)

                aaGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgtt                                                                                                                            >  1:103612‑M1/1‑124 (MQ=255)

                aaGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGACGACCACACAAAACACTAAACTACATTACATAAATGtataagtcatactatttat                                                                                                                            >  1:883806‑M1/1‑124 (MQ=255)

                 aGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttt                                                                                                                           >  1:3636‑M1/1‑123 (MQ=255)

                 aGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCGGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttt                                                                                                                           >  2:1015235‑M1/1‑123 (MQ=255)

                   aTTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttg                                                                                                                         <  1:234073‑M1/143‑23 (MQ=255)

                   aTTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACACACAACGCAGGGGGGCTGCGATATTCAATAATGCGTGATACAGATCACACAAAACACTCAATTACTTAACATTAATGtatacatcatacaattgatttg                                                                                                                         >  1:1082984‑M1/1‑121 (MQ=255)

                    tttttGCTAAATCGACGCAACTGTACTCGTCAATACACGCACATACAACGGAGGGGGGCTGAGCGTTTCAGTAATGCGTGATGCAGATCACATAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgg                                                                                                                        <  1:474702‑M1/143‑24 (MQ=255)

                    tttttCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAACCACTCAATTACTTAACATAAATGtataagtcatacttttggtttgg                                                                                                                        <  1:1124712‑M1/143‑24 (MQ=255)

                    tttttCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgg                                                                                                                        <  1:1112046‑M1/143‑24 (MQ=255)

                       ttCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAAAAATCAATTACCTAACATAAATGtataagtcatacttttgctttcggtg                                                                                                                     >  1:955020‑M1/1‑117 (MQ=255)

                          cTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtat                                                                                                                  >  2:158913‑M1/1‑114 (MQ=255)

                           tAAATCGACGCAACTGTACTCGTAACAACACGCACATACAACGGAGGGGGGCTGCGACTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatt                                                                                                                 >  2:576313‑M1/1‑113 (MQ=255)

                               tCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaa                                                                                                             >  2:982651‑M1/1‑109 (MQ=255)

                               tCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaa                                                                                                             <  1:498938‑M1/143‑35 (MQ=255)

                                cgacgaCACGGTCCTCGTCACTACACGAAAATAGCAGTGGGGGGGGCTGCAATTTCCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaac                                                                                                            <  1:831407‑M1/143‑36 (MQ=255)

                                cGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaat                                                                                                            <  1:157555‑M1/143‑36 (MQ=255)

                                  aCGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatct                                                                                                          <  2:938999‑M1/143‑38 (MQ=255)

                                   ctcaaCCGTACTCGTCACTACACGCACATACAACGGAGGGGGGTTCCGATTTTCAATAATGCGTGATGCATATCACACAAAACACTCCATTACTTAACATAAATGtataactcatacttttgttttgggtgtatttcaatctg                                                                                                         <  2:939960‑M1/141‑39 (MQ=255)

                                     cgactGCACTCGGCACTACACGCACATCCAACGGCGGGGGACCACAATCTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACGTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgtt                                                                                                       <  1:954066‑M1/141‑41 (MQ=255)

                                     cAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgtt                                                                                                       <  1:1164846‑M1/143‑41 (MQ=255)

                                     cAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgtt                                                                                                       <  1:703227‑M1/143‑41 (MQ=255)

                                      aaCTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgtta                                                                                                      >  1:621092‑M1/1‑102 (MQ=255)

                                         tGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaa                                                                                                   >  2:87499‑M1/1‑99 (MQ=255)

                                           tACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaag                                                                                                 >  1:1010947‑M1/1‑97 (MQ=255)

                                             cTCGTCACTACACGCGCATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCGATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtt                                                                                               <  1:578486‑M1/143‑49 (MQ=255)

                                              tCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcactccgttaaacagttt                                                                                              >  2:28922‑M1/1‑94 (MQ=255)

                                              tCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagttt                                                                                              >  2:1021891‑M1/1‑94 (MQ=255)

                                              tCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagttt                                                                                              <  2:408428‑M1/143‑50 (MQ=255)

                                                gTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCGATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagttttt                                                                                            >  1:539766‑M1/1‑92 (MQ=255)

                                                gTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagttttt                                                                                            <  1:369190‑M1/143‑52 (MQ=255)

                                                gTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagttttt                                                                                            >  2:372446‑M1/1‑92 (MQ=255)

                                                  cACGACACGCACATACTACGCAGGGCGGCTGCGATTTTCAATAATGCGTGATGCAGATCACATAAAACACTTAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcg                                                                                          <  1:377070‑M1/143‑54 (MQ=255)

                                                    cTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATACTGCAAGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatgtcaatctgttaaaaagtttttcggt                                                                                        >  1:739445‑M1/1‑88 (MQ=255)

                                                     tcaacgaaCATACAATGGAGGGGGGCTGAGATTTTCAATAATGCGTGATACAGAACACACAAAACACTCAATTACGAAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgcta                                                                                       <  1:907775‑M1/140‑57 (MQ=255)

                                                          gCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgtta                                                                                  >  1:632028‑M1/1‑82 (MQ=255)

                                                          gCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgcta                                                                                  >  1:67826‑M1/1‑82 (MQ=255)

                                                              aTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACCTAAATGtatacgtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaa                                                                              >  2:85730‑M1/1‑78 (MQ=255)

                                                              aTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGAGATGCAGATCACACAAAACACTCAATTACTTAACATAAACGcacaagccatactcttgccttaggtgtatttcaatctgataaaaagtttttcgctaccctagcaa                                                                              >  1:1179990‑M1/1‑78 (MQ=255)

                                                               tACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagttttttgctacgctagcaag                                                                             >  1:1040030‑M1/1‑77 (MQ=255)

                                                                  aaCGGAGGGGGGCTGCGATTTTCACTAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaa                                                                          >  1:746391‑M1/1‑74 (MQ=255)

                                                                  aaCGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaa                                                                          <  2:171584‑M1/143‑70 (MQ=255)

                                                                    ccgagGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTTAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaa                                                                        <  1:751214‑M1/141‑72 (MQ=255)

                                                                    cGGAGGGGGGCTGCGATTTTCAATAATCCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgtttttggtgtatttaaatctattaaaaagcttttcgctacgctatcacgcaata                                                                        >  1:942326‑M1/1‑72 (MQ=255)

                                                                     ggAGGGTGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaa                                                                       <  1:785611‑M1/143‑73 (MQ=255)

                                                                       cgggggtcTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACTCTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatg                                                                     <  2:1296694‑M1/142‑75 (MQ=255)

                                                                       aGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgatttgggtgtatttcaatctgttaaaaagtaaatagccaccctttcaaccaaaaatg                                                                     >  2:909350‑M1/1‑69 (MQ=255)

                                                                         gggggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaa                                                                   <  2:103612‑M1/143‑77 (MQ=255)

                                                                         gggggCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaa                                                                   <  1:183174‑M1/143‑77 (MQ=255)

                                                                             gCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacag                                                               <  2:724826‑M1/143‑81 (MQ=255)

                                                                             gCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacag                                                               <  2:359326‑M1/143‑81 (MQ=255)

                                                                              cTGCGACTTGCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacagg                                                              <  2:976934‑M1/143‑82 (MQ=255)

                                                                                  gATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaata                                                          >  2:581946‑M1/1‑58 (MQ=255)

                                                                                       tCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcga                                                     >  2:234469‑M1/1‑53 (MQ=255)

                                                                                         aataatGCGTGATGCAGATCACAAAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaa                                                   >  1:166066‑M1/1‑51 (MQ=255)

                                                                                          ataatGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaat                                                  >  2:355292‑M1/1‑50 (MQ=255)

                                                                                           taatGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatg                                                 >  2:332189‑M1/1‑49 (MQ=255)

                                                                                            aatGCGTGATGCAGATCAGACAAAACATTCAAGTACTTAACGTAAATGtataaggcatacttttgttttgcgtgtatttaaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgg                                                <  1:867836‑M1/143‑96 (MQ=255)

                                                                                             atGTGTGATGCAGATCACACAAAACACTCAATTACTCACCATAAATGtataattcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacagcaataatcgacatggg                                               >  2:1285716‑M1/1‑47 (MQ=255)

                                                                                             atGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatggg                                               >  1:793045‑M1/1‑47 (MQ=255)

                                                                                                cGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatg                                            <  1:87499‑M1/143‑100 (MQ=255)

                                                                                                  tGATGCAGTTCACACAAAACACTCAATTACTTAACATAAACGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgtt                                          <  1:1042756‑M1/143‑102 (MQ=255)

                                                                                                        aGATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagttattggctacgctaacaagaaaaaatgaaacagaaatgatggaaatggaatgttgcgaaa                                    >  1:337872‑M1/1‑36 (MQ=255)

                                                                                                         gATCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcaca                                   <  2:3636‑M1/143‑109 (MQ=255)

                                                                                                          aTCACACAAAACACTCAATTACTTAACATAAATGtatacgtcatccttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgataccaatcaaaaaagaaacagtaagactcacactaggatgttgctcacag                                  >  1:881424‑M1/1‑34 (MQ=255)

                                                                                                           tCACACAAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaactgaaacaggaataatcgaaatgggatgttgcgcacagt                                 >  2:67273‑M1/1‑33 (MQ=255)

                                                                                                               acaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaa                             >  1:79761‑M1/1‑29 (MQ=255)

                                                                                                               acaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaa                             >  2:936768‑M1/1‑29 (MQ=255)

                                                                                                               acaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggat                                             <  1:1177539‑M1/127‑99 (MQ=255)

                                                                                                               acaAAACACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggat                                             >  2:1177539‑M1/1‑29 (MQ=255)

                                                                                                                 aaaaCACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaat                           >  2:737175‑M1/1‑27 (MQ=255)

                                                                                                                   aaCACTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtattacaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataa                         >  1:369165‑M1/1‑25 (MQ=255)

                                                                                                                   aaCACTCAATTACTTAACATAAATGtataagtcatacttttggtttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataa                         <  2:613458‑M1/143‑119 (MQ=255)

                                                                                                                   aaCACTCAATCACTCAACACAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataa                         <  2:708270‑M1/143‑119 (MQ=255)

                                                                                                                     cacTCAATTTCTTAGCAGAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataact                       <  2:837331‑M1/143‑121 (MQ=255)

                                                                                                                      acTCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcccacagtcaaaataactc                      >  1:1204933‑M1/1‑22 (MQ=255)

                                                                                                                       cTCAAGTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactca                     <  2:1256056‑M1/143‑123 (MQ=255)

                                                                                                                        tCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatggataagggataatcgaaatgggatgttgcgcacagtcacaataactcat                    >  2:1041693‑M1/1‑20 (MQ=255)

                                                                                                                        tCAATTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcactttcaaaatcactcac                    >  2:38481‑M1/1‑20 (MQ=255)

                                                                                                                           aTTACTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgt                 <  1:430083‑M1/143‑127 (MQ=255)

                                                                                                                             tACTTAACATAAATGtataagtcatacttttgttgtgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaa               <  2:477658‑M1/143‑129 (MQ=255)

                                                                                                                               cTTAACATAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaacatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaat             >  2:283495‑M1/1‑13 (MQ=255)

                                                                                                                                     aTAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaataatcat       >  2:1316092‑M1/1‑7 (MQ=255)

                                                                                                                                     aTAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaataatcat       >  1:97618‑M1/1‑7 (MQ=255)

                                                                                                                                     aTAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgagatgttgcgcacagtcaaaataactcaccgtaaagaatcat       >  1:1231329‑M1/1‑7 (MQ=255)

                                                                                                                                      tAAATGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaacaatcgaaatgggatgttgcgcgcagtccaaataactcaccgtaactaatcatc      >  2:516730‑M1/1‑6 (MQ=255)

                                                                                                                                       aaaTGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaataatcatct     >  2:1307331‑M1/1‑5 (MQ=255)

                                                                                                                                          tGtataagtcatacttttgttttgggtgtatttcaatctgttaaaaagtttttcgctacgctagcaagcaaaaatgaaacaggaataatcgaaatgggatgttgcgcacagtcaaaataactcaccgtaaataatcatctgct  <  2:539766‑M1/143‑142 (MQ=255)

GTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCG  >  NC_000913/1978363‑1978643

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`