New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1470336 =	NA (NA)	62 (0.990)	5/282	8.3	NA	coding (979/1152 nt)	insI1	IS30 transposase
	?	NC_000913	= 1979270	NA (NA)					intergenic (‑55/‑483)	insA/uspC	IS1 repressor TnpA/universal stress protein
Rejected: Coverage evenness skew score above cutoff.

AAATCACTGACATGGGACAGAGGAATGGAACTGGCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAA  >  NC_000913/1470219‑1470448                                                                                                                      |                                                                                                                 gaacaacgcacgtGGTACAGAGGAAGGGAACTGGCCAGCCAGCTAGAATTTACGGTCACTACGGGCGGTAAAGTTTACTTCTGCGATCTTCAGCGGCGTTGGCAGCGGGGAACAAATGAGAACACAAATGTGCTAATTCGGCa                                                                                         <  2:296897/131‑1 (MQ=1)           ctgggtaCAGAGGAATGGAGCTGGCCAGACATCTAGAATTGACTGTCAGCACCGTCGTGAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCt                                                                               <  2:16237/137‑1 (MQ=1)                  gagcggAATGGATCTGTGCAGATATCTGGATTTGACTGTCGGCACCGGCGTTAAGTCTGACGTCTGCGATCCTCAGAGTCCTTGGCAGCTGGGAACAAATGAGAACACTAATGGGCTAATTCGGCAGTACGTTCCTAAAAAGa                                                                        <  2:531985/139‑1 (MQ=1)                           ggagcgggCCAGACATCTAGAACTTACTGGCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTg                                                               <  1:914720/137‑1 (MQ=0)                            gaccTGGCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGc                                                              <  1:617081/140‑1 (MQ=1)                                               aagtcacggTCAGCACCGGCGTTAAAGGTTACTTCGGCTATCTGAAGAGGCTGTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACGTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGaa                                           <  1:39963/135‑1 (MQ=1)                                                     ctctCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGAt                                     <  1:166739/140‑1 (MQ=1)                                                                         gtgtACTGCTGCGATCCTCAGAGTCCTGGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTaaa                 <  1:6865/140‑1 (MQ=0)                                                                                        ccccAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTGCCCGAAAAAGACATGTCATGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGaaa  <  1:249424/140‑1 (MQ=1)                                                                                                                      |                                                                                                                 AAATCACTGACATGGGACAGAGGAATGGAACTGGCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAAACAACAGACCGAGAAA  >  NC_000913/1470219‑1470448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.