New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 427703469 (1.110)4 (0.070) 4/266 8.6 5.8% coding (1565/1587 nt) yjcC putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase
?NC_000913 = 4277042 65 (1.110)coding (1573/1587 nt) yjcC putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGATATCAAAAATCGGACGCTCGGTGGTGC  >  NC_000913/4276900‑4277183
                                                                                                                                              |                                                                                                                                             
cGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGCGTTaa                                                                                                                                               >  1:445097/1‑143 (MQ=255)
 gCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAAc                                                                                                                                              <  1:585746/143‑1 (MQ=255)
 gCTGAACGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAAc                                                                                                                                              <  1:127405/143‑1 (MQ=255)
   tGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAAcgc                                                                                                                                            >  1:877974/1‑143 (MQ=255)
     aaGGCGGCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAAcgcgc                                                                                                                                          <  2:694290/143‑1 (MQ=255)
       ggCGTCGGAGCTGAGGAGCAGGTTAGCTGGCTGCGCAAGCGCGGCGTGCGCTATTGCCAGGGATGGTTCTTGGCGAAGGCGATGCCGCCGCAGGTGTTTATGCGATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCgg                                                                                                                                        <  2:34049/143‑1 (MQ=255)
        gCGTCGAAGCTGAGGCGCAGGTTAACGGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCggg                                                                                                                                       <  2:597078/143‑1 (MQ=255)
                  tGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTACCGCGCGGGCAGTAAAAtt                                                                                                                             >  1:13985/1‑143 (MQ=255)
                  tGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAAtt                                                                                                                             >  1:391779/1‑143 (MQ=255)
                        gCAGGTTACCTGGCTGCGCAACCGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGc                                                                                                                       <  1:880479/143‑1 (MQ=255)
                              tAACTGGCTGCGCAAACGCGGCGTGCGCTGTTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGc                                                                                                                 <  2:203302/143‑1 (MQ=255)
                                gcTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTGTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGa                                                                                                               <  2:965544/142‑1 (MQ=255)
                                aCTGGCTGCGCAGACGCGGCGTGCGCTATTGCCAGTGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGa                                                                                                               <  2:825956/143‑1 (MQ=255)
                                         gcAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCCAGAAAATTACAGGCGGAGGCGGTAAgcgcgg                                                                                                      >  2:298058/1‑141 (MQ=255)
                                         gcAAACGCGGCGTGCGCTATGGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTg                                                                                                      <  2:864271/143‑1 (MQ=255)
                                          caagtgcggcgTGCGCTGTTGCCAGGGATGGTTCTTTGCGAAGGCGATGGCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTgg                                                                                                     <  1:101644/138‑1 (MQ=255)
                                          cAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGACGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTgg                                                                                                     <  1:9277/143‑1 (MQ=255)
                                           aaaCGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTggg                                                                                                    >  2:350650/1‑143 (MQ=255)
                                            aaCGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGa                                                                                                   <  2:932944/143‑1 (MQ=255)
                                            aaCGCGGCGTGCGCTATGGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGa                                                                                                   <  2:292795/143‑1 (MQ=255)
                                            aaCGCGGCGGGCGCGATGGGCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGa                                                                                                   <  2:375324/143‑1 (MQ=255)
                                             aCGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCACTGGATGGAGCAATTACCCGCGCGGGAGCTAACGCGCGGGCACTCAAACTCCAGCCGCTGGCGATCACCGcccagcg                                                                                                  >  2:849485/1‑137 (MQ=255)
                                             aCGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAg                                                                                                  >  1:267730/1‑143 (MQ=255)
                                                cggcgTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGc                                                                                               <  2:877015/143‑1 (MQ=255)
                                                    gTGCGCTAGTGCCAGGGATGGATCCTGCCGATGGCCGTGGGGCCGCAAGTGCTTATGCAATGGATCGAGCACTTACGCGCTCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATc                                                                                           <  1:791093/143‑1 (MQ=255)
                                                      gcgcTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCaa                                                                                         <  1:653688/143‑1 (MQ=255)
                                                              gCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAAGTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGa                                                                                 <  1:1068465/143‑1 (MQ=255)
                                                               ccAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGAc                                                                                >  1:913293/1‑143 (MQ=255)
                                                               ccAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCGGGGAGTGCGATCAAACTGCGGAc                                                                                >  2:613124/1‑143 (MQ=255)
                                                                 aGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAGTTACCCGCGCGGGAGTTAACGCGCTGGCAACAACATTACAGGAGGTGGCGATAATCGCTGGGAGCGCGACCAACCGGCCGCCgg                                                                              >  2:542622/1‑143 (MQ=255)
                                                                 aGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACgg                                                                              >  2:1000284/1‑143 (MQ=255)
                                                                        gTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTCCCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAAcgc                                                                       >  1:568765/1‑143 (MQ=255)
                                                                          tCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATCGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCgg                                                                     <  2:979614/143‑1 (MQ=255)
                                                                             ttGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGgag                                                                  >  2:115629/1‑143 (MQ=255)
                                                                               gCGAAGGCGATGCCGCGGCAGGTGTTTAGGCAATGGAGGGGGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGCGGCGATAATCGCGGGGAGTGCGATCAAACTGCCGACGGAAACGCGGGAGAAg                                                               <  2:89382/143‑1 (MQ=255)
                                                                                cGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAg                                                               <  2:877974/143‑1 (MQ=255)
                                                                                cGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAg                                                               >  2:962358/1‑143 (MQ=255)
                                                                                 gAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATCAAATTACAGGCGGTAGCGATAATCGCTGGGAGAGCGATCAAACTGCCGACGGAAAACGCGGGCGAAgg                                                              >  2:200551/1‑143 (MQ=255)
                                                                                  acggCGATGCCGCCGCACGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGt                                                             <  1:62413/141‑1 (MQ=255)
                                                                                  aaGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGCGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGt                                                             >  2:1025445/1‑143 (MQ=255)
                                                                                           ccggcgCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCga                                                    <  1:30612/143‑1 (MQ=255)
                                                                                              ccgcAGGTGTTTATGCAATGGATGGGGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACGGCCGACGGAAAACGCGGGGGAAggacgcccgcgaggc                                                 >  2:625937/1‑130 (MQ=255)
                                                                                                  aGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCaaa                                                                                        <  2:1038571/100‑1 (MQ=255)
                                                                                                  aGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCaaa                                                                                        >  1:1038571/1‑100 (MQ=255)
                                                                                                  aGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATaa                                             >  1:763061/1‑143 (MQ=255)
                                                                                                      gtgtATGGAGTGGATGGAGCAATTACCGGGGGGGGAGTGAGCGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCa                                         <  2:1090457/140‑1 (MQ=255)
                                                                                                              aaTGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGCAGGTCTGCTGCGAGACATAACCCAGGTCCAtt                                 >  1:783422/1‑143 (MQ=255)
                                                                                                              aaTGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCAtt                                 >  2:657580/1‑143 (MQ=255)
                                                                                                               atggatggAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACAGAACCCAGGTCCATTg                                >  2:515839/1‑143 (MQ=255)
                                                                                                                  gatgtaGCAACTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCAGTGGCTATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGa                             <  1:449377/143‑1 (MQ=255)
                                                                                                                  gatggaGGAACTACCGGCGGGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACAGAACCCAGGTCCATTGCGa                             <  2:391779/143‑1 (MQ=255)
                                                                                                                  gatggaGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTGCCGGCGGTGGCGATAATCGCTGGCAATGCGATCAAACTGCCGACGGAACACGCGGGGGAGGGCCGGCTGCGAGACACAACCAAGGTCGATTGCGa                             >  2:598579/1‑143 (MQ=255)
                                                                                                                  gatggaGCAATGACCCGCGCGGGAGTTAACGCGCGCGCAATAAAATGTCGGGCGGTGGCGATAATCGCTGGGAGTGCGATCAACCTGCCGACGGCAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGa                             <  2:512575/143‑1 (MQ=255)
                                                                                                                  gaggggggaatgcgccGCTCGGGCGTTAGCGCGCGGGCAGTGAAATGACAGGCGGGGGGGGTAATCGCGGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGa                             <  2:699158/129‑1 (MQ=255)
                                                                                                                   atggaGCAAGTACCCGCGCGGGAGTTAACGCGCGGGCAATAAACTTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGat                            <  1:347593/143‑1 (MQ=255)
                                                                                                                    tggaGCAATTAGCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGata                           <  1:732339/143‑1 (MQ=255)
                                                                                                                       aGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGCGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGATATCa                        >  1:235950/1‑143 (MQ=255)
                                                                                                                        gCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGGGGTGGGGATAAACGCTGGGGGAGAGTTAAAACTACCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGATATCaa                       >  1:508287/1‑143 (MQ=255)
                                                                                                                            ttACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCGGGGAGGGCGGTCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTACGAGACATAACCCGGGTCCATGACGAGACCACAAAt                   >  2:93830/1‑143 (MQ=255)
                                                                                                                             tACCCGCGCGGGAGATAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGATATCAAAAATc                  <  1:350650/143‑1 (MQ=255)
                                                                                                                               cccGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCACGACATAACACAGGGGCGTTTGGATATAAAAAAACgg                >  2:6007/1‑143 (MQ=255)
                                                                                                                                ccGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGATATCAAAAATCGGa               <  1:892343/143‑1 (MQ=255)
                                                                                                                                ccGCGCGGGACTTAGAGCGCGGGGGATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGATATCAAAAATCGGa               <  1:860171/143‑1 (MQ=255)
                                                                                                                                 cgcgcgGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGATATCAAAAATCGGAc              <  1:1037293/143‑1 (MQ=255)
                                                                                                                                      gggAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGATATCCAAAATCGGACGCTCg         >  2:197729/1‑143 (MQ=255)
                                                                                                                                      gggAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCGGGGAGTGCGATCAAACTGCCGAGGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGATATCAAAAATCGGACGCTCg         >  1:979564/1‑143 (MQ=255)
                                                                                                                                       ggggtgaaCGCGCGGGCAATAAAATCACACGCGGGGGTGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGATATCAAAAATCGGACGCTCgg        <  2:520997/137‑1 (MQ=255)
                                                                                                                                         aGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGATATCAAAAATCGGACGCTCggtg      <  1:563692/143‑1 (MQ=255)
                                                                                                                                           ttAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCAGTATGAAAAATCGGATGCACcgtggt    >  2:647825/1‑143 (MQ=255)
                                                                                                                                           ttAACGCGCGGGCAATAAAATTACAGGCGAAAGCTATTTCCGCGGGGAGTGCGATCAAACTGACGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGATATCAAAAATCGGACGCTCggtggt    <  1:553323/143‑1 (MQ=255)
                                                                                                                                           ttAACGCGCAGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGATATCAAAAATCGGACGCTCggtggt    <  1:848688/143‑1 (MQ=255)
                                                                                                                                             aaCGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGGGGGAAAACGCGGGAGAAGGTCTGCTGAGAGACATAACACAGGTCCATTGCGACATCAAAAATCGGACGGTCGGCGGTgc  >  2:649306/1‑143 (MQ=255)
                                                                                                                                              |                                                                                                                                             
CGCTGAAGGCGTCGAAACTGAGGAGCAGGTTAACTGGCTGCGCAAACGCGGCGTGCGCTATTGCCAGGGATGGTTCTTTGCGAAGGCGATGCCGCCGCAGGTGTTTATGCAATGGATGGAGCAATTACCCGCGCGGGAGTTAACGCGCGGGCAATAAAATTACAGGCGGTGGCGATAATCGCTGGGAGTGCGATCAAACTGCCGACGGAAAACGCGGGAGAAGGTCTGCTGCGAGACATAACCCAGGTCCATTGCGATATCAAAAATCGGACGCTCGGTGGTGC  >  NC_000913/4276900‑4277183

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.