Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 257,908 Δ776 bp [crl] [crl]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 257908–258675 258683 9–776 68 [0] [0] 71 [crl] [crl]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2579070 (0.000)66 (1.120) 49/266 0.1 100% intergenic (+8/‑769) crl/crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers
?NC_000913 258684 = 0 (0.000)pseudogene (9/331 nt) crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers

TGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTT  >  NC_000913/257766‑258042
                                                                                                                                             |                                                                                                                                       
tgtTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAa                                                                                                                                        <  1:239827‑M1/143‑2 (MQ=255)
  ttAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACGGGAGATAGCAATGACGTTACCGAGTGGACACCCGCAGCGCAGCTTGATCAAAAAATTTACCGCAATAGGACCGTATATTCGTGAAGGTAagt                                                                                                                                      >  1:810162‑M1/1‑140 (MQ=255)
  ttAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGCTAGCAATGACGTTAACAAGGGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCGGTAGATTCGTGAAGGTAagt                                                                                                                                      >  2:594000‑M1/1‑140 (MQ=255)
  ttAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagt                                                                                                                                      >  1:774458‑M1/1‑140 (MQ=255)
    aaaaaTTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgc                                                                                                                                    <  2:965274‑M1/143‑6 (MQ=255)
         tttGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaaga                                                                                                                               <  2:97723‑M1/143‑11 (MQ=255)
          ttGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTAAATTCGTGAAGGTAagtgcaaagct                                                                                                                              >  2:839376‑M1/1‑132 (MQ=255)
              tAAAGTTTGCCAATTTGTTAAAACAGTTGCATCACCACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatc                                                                                                                          <  2:618014‑M1/143‑16 (MQ=255)
                    ttGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtggaaagataatcgattct                                                                                                                    >  1:32188‑M1/1‑122 (MQ=255)
                        cAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaacgataatcgattcttttt                                                                                                                >  2:865351‑M1/1‑118 (MQ=255)
                        cAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGGATATTCGTGAAGGAAagtgcaaagataatcgatccttttt                                                                                                                >  2:186313‑M1/1‑118 (MQ=255)
                             tGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgatt                                                                                                           <  2:208052‑M1/143‑31 (MQ=255)
                                tAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtc                                                                                                        >  1:974117‑M1/1‑110 (MQ=255)
                                   aaCAGTTGCATCACAACAGAAGATAGCAATGACGTTACCTAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctgg                                                                                                     <  1:550413‑M1/143‑37 (MQ=255)
                                   aaCAGTTGCATCACAAAAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctgg                                                                                                     <  1:1049426‑M1/143‑37 (MQ=255)
                                    aCAGTTGCAGCACAACAGGAGATAGCAATGACGTGACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAAGTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggc                                                                                                    <  1:275803‑M1/143‑38 (MQ=255)
                                     cAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggct                                                                                                   <  2:610063‑M1/143‑39 (MQ=255)
                                       gTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggcagt                                                                                                 >  1:286161‑M1/1‑103 (MQ=255)
                                         tGCATCACAACAGCAGATAGCAATGACGTCACCGAGTGGACACCCGAACAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTACATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtat                                                                                               <  1:213603‑M1/143‑43 (MQ=255)
                                             tCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgagtctttttcgattgtctggctgtacgcgt                                                                                           >  2:498767‑M1/1‑97 (MQ=255)
                                              cagaacaggaGATATCAATGACGTTACCGACTGCACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtc                                                                                          <  2:569139‑M1/140‑48 (MQ=255)
                                              cacaACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTAAAGGTAagtgcaaagataatcgcttctttttcgagtgtctagaggtatgttcg                                                                                          >  2:872024‑M1/1‑96 (MQ=255)
                                              cacaACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGAGTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaaaataatcgattctttttcgattgtctggctgtatgcgtc                                                                                          >  2:497929‑M1/1‑96 (MQ=255)
                                              cacaACAGGAGATAGCAATGACGTCACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtc                                                                                          <  2:87477‑M1/143‑48 (MQ=255)
                                              caaaacaggaGATAGCAATGACGTGACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATGCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtc                                                                                          <  2:87641‑M1/140‑48 (MQ=255)
                                                 aacaGGAGATAGCAATGATGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAATAATTTACCGCTCTAGTTCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttgtcgattgtctggctgtatgcgtcaac                                                                                       <  1:560784‑M1/143‑51 (MQ=255)
                                                  acaGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctgactgtatgcgtcaacg                                                                                      <  2:878637‑M1/143‑52 (MQ=255)
                                                        gaTAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaac                                                                                <  1:843795‑M1/143‑58 (MQ=255)
                                                         agatgaatgacgTTACCGAGTCGATACGTGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaacc                                                                               <  2:144038‑M1/138‑59 (MQ=255)
                                                         aTAGAAATCACGTTACCGAGTGGGCACCCGAAGGTCATATTGATAAAGTCATTCACCTCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaacc                                                                               <  2:712811‑M1/143‑59 (MQ=255)
                                                           aGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAGTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattcttcctccattgtctggctgtatgcgtcaacgtgaaaccgg                                                                             <  2:955087‑M1/143‑61 (MQ=255)
                                                               aTGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcacc                                                                         >  1:768714‑M1/1‑79 (MQ=255)
                                                                   cGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtat                                                                                               <  1:1005819‑M1/117‑43 (MQ=255)
                                                                   cGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtat                                                                                               >  2:1005819‑M1/1‑75 (MQ=255)
                                                                          gAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaccgtgaaacctgcaccggacgggcctg                                                              >  1:1076182‑M1/1‑68 (MQ=255)
                                                                                ccaccCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattct                                                        >  1:803916‑M1/2‑62 (MQ=255)
                                                                                    ccGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctgggg                                                    >  2:657278‑M1/1‑58 (MQ=255)
                                                                                    ccGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctgggg                                                    >  1:356722‑M1/1‑58 (MQ=255)
                                                                                    ccGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctgggg                                                    >  2:156634‑M1/1‑58 (MQ=255)
                                                                                     cGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggc                                                   >  1:618488‑M1/1‑57 (MQ=255)
                                                                                         gagCAGATTGATCAAAAATGTTACCGCACTAGGCCCGTATATTCGGGAAGGTAcgtgcaaagataatcgattctttttcgattgtctggctgtgtgggtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggt                                               <  2:143207‑M1/143‑91 (MQ=255)
                                                                                            cAGATTGATCAAAAAAGTTACCGCACTAGGCCCGTATATTCGTGACCGTCgcggaagtgatggtcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtgga                                            <  1:503450‑M1/143‑94 (MQ=255)
                                                                                              gATTGATCAAAAAATTTCCCCCACTATGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatg                                          <  1:1067637‑M1/143‑96 (MQ=255)
                                                                                              gATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatg                                          >  2:139644‑M1/1‑48 (MQ=255)
                                                                                               aTTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatgg                                         <  1:726815‑M1/143‑97 (MQ=255)
                                                                                               aTTGATCAAAAAACTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtaaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggaggg                                         >  2:211002‑M1/1‑47 (MQ=255)
                                                                                                tggatgtaatattgtaccgaactaggcggGTATATTCGTGTAGGTAagtgcaaagatattcgattcttttgcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatgga                                        <  2:421752‑M1/129‑98 (MQ=255)
                                                                                                    tCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtttggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctg                                    >  1:572181‑M1/1‑42 (MQ=255)
                                                                                                    tCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctgggggatggagctg                                    >  2:1028323‑M1/1‑42 (MQ=255)
                                                                                                      aaaaaaTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgagtgtctggctggatgggtgaacgtgaaaccggcaccggaagtgcgtgaattgtggggcgggcggagcgagctgaa                                  >  2:592214‑M1/1‑40 (MQ=255)
                                                                                                      aaaaaaTTTACCGCAATAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgagtcaacgtgaaaccggcaccggaagtgcgagacgtgtggggcgggggggtggagctggg                                  >  1:471797‑M1/1‑40 (MQ=255)
                                                                                                       aaaagttgcccgtactcggcCCGTTGATTTGTGAAGTTAagtgcaaaggtaatcgattctttgtcgattgtctggcggtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaa                                 <  2:625428‑M1/134‑105 (MQ=255)
                                                                                                       aaaaaTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctagctgtatgcgtgaacgtgaaaccggccccggaagtgcgtgaattctggggctggtggatggagctggaa                                 >  1:296713‑M1/1‑39 (MQ=255)
                                                                                                            tttACCGCCCTAGGCCCGTATATTCGGGAGGGTCagtgccaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgca                            <  1:970672‑M1/143‑110 (MQ=255)
                                                                                                            tttACCGCACTAGGCCCGGCTATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgcattctggcgctggtggatggggctggaagcgcc                            >  2:643984‑M1/1‑34 (MQ=255)
                                                                                                                     cTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaagtcgggggctggtggatgcggcgggaagcgcgggaatcccg                   >  2:923578‑M1/1‑25 (MQ=255)
                                                                                                                        ggCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttt                <  1:432549‑M1/143‑122 (MQ=255)
                                                                                                                           ccGTATATTCGTGAATGTAagggcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttac             <  2:66599‑M1/143‑125 (MQ=255)
                                                                                                                           ccGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttac             >  1:412661‑M1/1‑19 (MQ=255)
                                                                                                                           ccGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttac             <  2:412661‑M1/143‑125 (MQ=255)
                                                                                                                              tataTTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggctggggctggaggcgcaggaatcccgctttaccta          >  1:365982‑M1/1‑16 (MQ=255)
                                                                                                                              tataTTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttaccta          >  1:650666‑M1/1‑16 (MQ=255)
                                                                                                                                 atTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacag       <  1:657278‑M1/143‑131 (MQ=255)
                                                                                                                                   tCGTGAAGGGAagtgcaaagataatcgattcgttttctattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagtt     <  2:835662‑M1/143‑133 (MQ=255)
                                                                                                                                     gTGAAGGTAtttgtatatataatcgattcgtgttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttac   <  1:521864‑M1/143‑135 (MQ=255)
                                                                                                                                     gTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttac   >  1:705810‑M1/1‑9 (MQ=255)
                                                                                                                                      tGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttacc  >  1:279080‑M1/1‑8 (MQ=255)
                                                                                                                                      tGAAGGTAagagcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatggagctggaagcgcaggaatcccgttttacctacagttacc  <  1:60094‑M1/143‑136 (MQ=255)
                                                                                                                                             |                                                                                                                                       
TGTTAAAAATTTGCTAAATTTTGCCAATTTGGTAAAACAGTTGCATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTT  >  NC_000913/257766‑258042

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: