New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1207790 =6 (0.080)55 (0.840) 48/250 0.2 82.5% coding (290/630 nt) stfP e14 prophage, uncharacterized protein
?NC_000913 1209619 = 18 (0.270)pseudogene (1/501 nt) stfE pseudogene, e14 prophage, side tail fiber protein fragment family,Phage or Prophage Related

TCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1207947‑1207790
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAG  >  NC_000913/1209619‑1209760
                                                                                                                                                                                                                                                                                                            
TCCATCCCCCCCAGAGGCAGATGCTTTAAAGGCATGCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTC                                                                                                                                                               >  2:1231531/1‑143
   ATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTCCTGTCGCCGTTCCTGCCTTGAGTCTTGCTCCTT                                                                                                                                                            >  2:877151/1‑143
     CCCCCCCAGAGGCAGATGCTTTTGCGGCCTTCCACCCCCACTGACTGCTTACTGCTTGCTCACTACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTCGTGTAGCCGTTGCCGCGTTGAGTTTTGCTCCTTCT                                                                                                                                                          >  2:341258/1‑143
       CCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCC                                                                                                                                                        <  1:486095/143‑1
         CCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCGTTGAGTTTTGCCCCCTCTCCCc                                                                                                                                                      >  2:12067/1‑142
            AGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCTCAAAC                                                                                                                                                   >  2:997400/1‑143
             GAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGATATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACC                                                                                                                                                  >  2:690331/1‑143
                    ATGCTTTTGCGGCATTCCACCTCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTT                                                                                                                                           <  1:708151/143‑1
                      GCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTAT                                                                                                                                         <  2:976520/143‑1
                          TTGCGGCATTCCACCCCCACTGAATGATTACGGATTGCTCCATACCTCAAATCATACGCGGTCTAGCTATGACACCGGTGCGTCCTAATGTAGCCGTTGCTGCATGGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAA                                                                                                                                     <  1:766813/143‑1
                            GCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGCAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTGATGAAGAT                                                                                                                                   >  1:128491/1‑143
                             CGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATCACCGGTATAGCTATGAAACCGGTGCGTCCTCAGGTAGCCGCGGCTGCATTGAGTCTTGCTCCTTCTCCCAAACCAACGCTTATGGAAttc                                                                                                                                  >  2:477912/1‑140
                                CATTCCAGCCCCACTGAGTGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAG                                                                                                                               <  1:244956/143‑1
                                  TTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAA                                                                                                                             <  2:517009/143‑1
                                    CCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAtt                                                                                                                           <  2:883818/143‑3
                                           catTGAATGATGACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGCAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGC                                                                                                                    <  1:175082/140‑1
                                                   GATTTCTGTTTGCTCAATACCACTACTCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCA                                                                                                            <  2:8992/143‑1
                                                   GATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGTAATAACAAGCAAATGGCA                                                                                                            >  2:9313/1‑143
                                                        CTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAA                                                                                                                      <  2:446889/128‑1
                                                        CTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAA                                                                                                                      >  1:446889/1‑128
                                                           ATTGCTCAATACCACTAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGATTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCT                                                                                                    <  1:782187/143‑1
                                                           ATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCT                                                                                                    <  2:16779/143‑1
                                                            TTGCTCAACACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTCAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTG                                                                                                   <  2:188466/143‑1
                                                              GCTCAATACCACCAATAATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCGAGTGCTGCAGTGAGATTTGCTCCTTCTCCCAAACGAACGTTTATGAAAATGAAGAACTAACAAGACAATGGCATCAATCGTGCg                                                                                                 >  1:1069823/1‑142
                                                               CTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGACGTTGCTGCATTGAGTGTTGCTCCTTCTCCCAAACCAACGTTTATGAAAGTGAAGAAATAACAAGCAAATGGCAACATTACTGCTa                                                                                                >  1:788565/1‑142
                                                                TCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCACCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTT                                                                                               <  1:812863/143‑1
                                                                TCAATACCACCAATCATAACCGGTATAGCTATAACCCCGCTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAACTGGCATCATTCCTGCTTT                                                                                               >  2:885709/1‑143
                                                                TCAATACCACCAATCATAACCGATATAGCTATGAAACAGGTGCGTCCTAATATAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAGTGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTT                                                                                               >  2:381705/1‑143
                                                                  AATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTACTGTAGCCGTTGCTGCATTGAGTTTTGATCCTTCTCCCAAACCAACGTCTATGAAAATGACGAGATAACAAGCAAGTGGCATCATTCCTGGTTTTA                                                                                             >  2:280132/1‑143
                                                                     ACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCGAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACACGCGAATGGCATCATTCCTGCacctaccc                                                                                          >  1:755767/1‑135
                                                                       CACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTACTGCATATACCAGG                                                                                        >  1:356942/1‑143
                                                                         CCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGGTGCTGCATTGAGTTTTGCGCCTTCTCCCAAACCAACGTTTATGAAAATGACGAAATAACCAGCAAATGGCATCATTCCTCCGATTACAAGGGG                                                                                      >  1:406596/1‑143
                                                                          CAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTCATGTAGCCGTTGCTGCATTAAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAACTGGCATCATTCCTGCTTTTACCAGGGGG                                                                                     >  2:272251/1‑143
                                                                            ATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAT                                                                                   <  2:831576/143‑1
                                                                                TAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCAATGATTTTTGCGCCTTCTCCCAAACCAACGTTTATGCAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACAGGGGGGATTAAA                                                                               >  1:804529/1‑143
                                                                                  ACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATAAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACA                                                                             >  2:9679/1‑143
                                                                                          AGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGGTTACGAAAAGGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATT                                                                     <  2:552857/143‑1
                                                                                           GCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTG                                                                    <  1:445086/143‑1
                                                                                            CTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGAGGGATTTAACATACTAATTcg                                                                   >  1:932330/1‑141
                                                                                            CTATGAAACCGGTGCGCCCTAATCGAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCCAATGGTATCAGTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGG                                                                   <  1:1055620/143‑1
                                                                                             TATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGC                                                                  <  2:493749/143‑1
                                                                                              ATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATTCTTATTGGCT                                                                 >  1:475375/1‑143
                                                                                                 AAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTGTGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATG                                                              >  2:809598/1‑143
                                                                                                    CCGGTGCGTCCCAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCTTCATTCCTGCTTTTACCAGGGGGTTTTAATATGCTTATTGGCTATGTAC                                                           <  1:179914/143‑1
                                                                                                      GGTGCGCCCGAATGTAGCCGTTGCTTCAGTGAGTTTTGCTCCTTCTCCCAAACCAGCGGTTATGAAAATGGAGAAATAACAAGCAAATGTCATCATTCCTGCTTTTACCATGGGGATTTAACATGCTTATTGGCTATGTACGC                                                         <  1:419794/143‑1
                                                                                                             CCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAA                                                  <  1:793871/143‑1
                                                                                                               TAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAGGAAATAACAAGCAAATGGCGTCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACA                                                >  2:225479/1‑143
                                                                                                               TAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACA                                                >  2:396280/1‑143
                                                                                                               TAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCGTATTGGCTAGGTACGCGCACCAACA                                                >  1:1014794/1‑143
                                                                                                                 atcTAGCCGTGGCTGCATTGATTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAA                                              <  1:1033767/140‑1
                                                                                                                    TAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGA                                           >  2:1254770/1‑143
                                                                                                                    TAGCCGGTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGA                                           <  1:341258/143‑1
                                                                                                                      GCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACC                                         >  1:548452/1‑143
                                                                                                                          TTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAA                                     <  1:9313/143‑1
                                                                                                                          TTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTACTGCGTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAA                                     <  1:624909/143‑1
                                                                                                                             CTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATAAACAACTGACCAGAACAC                                  >  1:238496/1‑143
                                                                                                                               GCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAAAACAG                                >  1:899970/1‑143
                                                                                                                                CATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACACGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATATAACATGCTTATTGGCTATGTACGCGTAACAACAAATGAACAGAACACAGA                               >  1:490953/1‑143
                                                                                                                                CATTGAGTTGTGCTCCTTGTCCCACTCCGGCGTTTATGAAAATGAAGACATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGA                               <  1:1117066/143‑1
                                                                                                                                   TGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACTAGGGGGTCGCAACATCCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACAAAGATat                            >  2:941117/1‑141
                                                                                                                                   TGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGCTTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCT                            >  2:1268878/1‑143
                                                                                                                                            CTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGCGATTTCACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAA                   <  1:272251/143‑1
                                                                                                                                               tTTCGCCCAACCCACTGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGC                <  1:690331/142‑1
                                                                                                                                                TTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCG               <  1:1231531/143‑1
                                                                                                                                                 aCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGC              <  2:928179/142‑1
                                                                                                                                                    CCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGA           >  2:975194/1‑143
                                                                                                                                                     ccagcCCACCGTTGATGAAGAGGAGCAAATAACAAGCAAATGGCATCATTCTTGCTTTGACCAGAGGCATTTAACATCCTTATCGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAA          <  1:510337/138‑1
                                                                                                                                                     CCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGACCACAGATCTACAACGTAATGCGCTGcg          >  2:1132329/1‑141
                                                                                                                                                     CCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACACCGTCATGCGCTGAA          >  2:501034/1‑143
                                                                                                                                                     CCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTCATTGGCTATGTACGCGTAGCAACAAATGACCAGCACCAAGATCAGCAACGTAACGCGCgcaa          >  1:502991/1‑139
                                                                                                                                                     CCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACAAAGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTCATGCGATGAA          >  1:253305/1‑143
                                                                                                                                                     CCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCGCTTACCAGGGGGATTGAACATGCTTATTGGCTAGGTACGCGTATCAACCAATGACCAGAACACAGATCTACAAGGTCATGCGCTGca          >  1:1030779/1‑141
                                                                                                                                                           CAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGC    >  2:684468/1‑143
                                                                                                                                                            tACGTTTATGAGAATGAAGAAATAAGAACCTAATGGCATCATTCCTGCTTTTATCAGGGGGATGTAACATGCTTATTGGCTATGTATGCTTATCAAGAAATGGCGAGCACAGAGATCTACAACGTAATGCGCTGAACTGTGCA   <  1:1285563/142‑1
                                                                                                                                                             ACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAG  >  2:1221004/1‑143
                                                                                                                                                             ACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAG  >  2:129673/1‑143
                                                                                                                                                                                                                                                                                                            
TCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1207947‑1207790
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAG  >  NC_000913/1209619‑1209760

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.