| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 1 (0.010) | 65 (0.880) | 53/282 | 0.3 | 98.5% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 1 (0.010) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
GTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGT > NC_000913/4001503‑4001784 | gTATGGATTGAGCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATct < 2:438466‑M1/143‑3 (MQ=255) gATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATTTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttc < 2:325999‑M1/143‑8 (MQ=255) gATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCCTctccttc > 2:849500‑M1/1‑136 (MQ=255) aTTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttct > 1:971102‑M1/1‑135 (MQ=255) ttGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttctt < 2:797713‑M1/143‑10 (MQ=255) tGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttc > 2:399203‑M1/1‑133 (MQ=255) tGATCTGGTCGCACCGGACGACGACGAGCGACTGCGCGCACAACCAGTAATTGGGCAGAGCGTGGCACCGCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttc < 2:240029‑M1/143‑11 (MQ=255) aCCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagat < 1:143817‑M1/143‑23 (MQ=255) ccGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatg < 1:469668‑M1/143‑24 (MQ=255) gacgacgacGAGCGACTGCGCGTACAATCTGAACTTGGTCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGCCGGCCTGCATctccttcttcttctttgaagatgcgg > 2:950412‑M1/1‑117 (MQ=255) gacgacgacGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcgg < 2:554904‑M1/143‑27 (MQ=255) cgacgacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaa < 2:744557‑M1/143‑29 (MQ=255) cgacgacgaGCGACTGCGCGTACAATCTGAACTCGGCCACAGCCTGGCAACCCTCCCGGAACTGGAAGACAGCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaa < 2:1200517‑M1/143‑29 (MQ=255) cgacgacgaGCCACTCCTCGTACAATCTGAACATGGACAAAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaa < 2:235866‑M1/143‑29 (MQ=255) acgacgaGCGACTGCGCGTACAATCTGACCTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTCA‑AGACGACTACGGCCTGCATctccttcttcttctttgaagatgcggaaga < 2:543614‑M1/143‑31 (MQ=255) gacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCCACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGC‑AGCCGACGACGGCCTGCATctccttcttcttctttgcagacccggcggatc > 1:180407‑M1/1‑111 (MQ=255) actagggactgcgCGTACAATCTGAACTTGGCCCGAGGCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatca < 1:193599‑M1/137‑34 (MQ=255) acgaGCGACTGCGCGTACGATCTGAACTTGGCCAGAGCCTGGGAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatca < 1:193601‑M1/143‑34 (MQ=255) gCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgcc > 2:1066981‑M1/1‑106 (MQ=255) cGACTGCGCGTACAAGCGGAACTGGGCCAGAGTCTGGCAAACCGCCCTGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccg < 1:615696‑M1/143‑39 (MQ=255) cgaacaaTCTGAACTCGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCGTTGATACAC‑ATGTCGGCCTGCATctccttcttctgctttgaagatgcggaagatcacgcctgtaactcc < 2:1224997‑M1/140‑47 (MQ=255) gTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGT‑GGTGGTGGACGACCAACATatccttcttcttctttgaagatgcggaagatcacgccggtaactaca > 2:941641‑M1/1‑96 (MQ=255) aaTCTGAACTTGTCCACAGCCTGGCAACCCCCCCGGAACTGGAAGACATCGACGCATCGGCACGTTTCTTTGA‑AGACGACGACGTCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgt < 2:330167‑M1/143‑52 (MQ=255) aTCTGAACTTGCCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtg < 1:703349‑M1/143‑53 (MQ=255) ggcgctggccaGAGCCTGGCACGCCGCCCGGAACTGGAAGCCATCGTCGCATCGTCACGTTTCTTTGA‑AGACGACGACGGCCTTCACctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcat < 1:220937‑M1/138‑57 (MQ=255) aaCTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatt < 2:887380‑M1/143‑58 (MQ=255) ggCCAGCGCCTGGCTACCCGCTCGTATCTGGTAGACATCGAATCATCGGCTCGTTTCTTTGA‑AGACGACGACGGCCTTCATctccttcttcttctttgatgatgcggaagaccacgccggtaactccactgtggcatttacca < 1:888369‑M1/143‑63 (MQ=255) gCCAAAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccat < 2:1119808‑M1/143‑64 (MQ=255) cAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgcggcatttacaatcc > 1:349625‑M1/1‑78 (MQ=255) gagCGTGGCCACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgt < 1:243464‑M1/143‑68 (MQ=255) gCCTGGCAACCCGCCCGGAACTGGAAGACATCGTGGCTCCGACACCCGTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtga < 1:909508‑M1/143‑70 (MQ=255) tctGGCAACCCGCCCGGAACTGGAAGACAGCGAAGCATCGGCATGTGTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggtatttaccatccttgat < 1:163415‑M1/142‑71 (MQ=255) cgggcaACCCCCCCGGAACTGGAAGACATCGAAGCAGCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatg < 2:1122840‑M1/141‑72 (MQ=255) tccgcccagAACGGGAAGACATGGACGCATCGACACGTTTCTGTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtct < 2:436931‑M1/142‑79 (MQ=255) cccgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctctgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtct < 2:375152‑M1/143‑79 (MQ=255) cccgcccgGAACGGAGAGACATGGAAGCATGGGCACGTTGCTTGGA‑AGACGACGACGGCCTGCATctccgtcttctcctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtct < 2:31277‑M1/143‑79 (MQ=255) ccgTAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgttta < 2:708911‑M1/143‑84 (MQ=255) ccgGAAGTGGAATACATCGAAGCATCGGCGCGTTGCTGTGA‑AGACGACGACGGCCTGCAT‑TT‑A‑‑‑CTTCAACTGGTTGTAAGATGCCGAAGATCACGCCGTTAGCTCCACTGTGGGATTTTCCATCCGTGATGGTCGTCTGTTTa < 1:1049560/143‑1 (MQ=255) ccgGAACTGGAAGATATCGAAGCAGCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgttta < 2:867681‑M1/143‑84 (MQ=255) ccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgttta < 1:399203‑M1/143‑84 (MQ=255) cgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccctccgtgatggtcgtcggtctac > 2:617899‑M1/1‑59 (MQ=255) ggAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactcccctgtggcatttaccatccctgatggtcgtatgtttcct > 1:331818‑M1/1‑58 (MQ=255) cTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgc < 2:400158‑M1/143‑90 (MQ=255) ggAAGGCATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctcctacgtcgccgttgaagatgcgggagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgt < 1:148653‑M1/143‑92 (MQ=255) aaGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgttggtcgtctgtttgctctgcgtga > 2:995166‑M1/1‑50 (MQ=255) aaGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtga < 2:971102‑M1/143‑94 (MQ=255) aGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgaaggcagtctgtttcctttccgcgta > 2:1072963‑M1/1‑49 (MQ=255) gacgccggagcagcggtgcgttCCTTTGA‑GGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagc < 1:761668‑M1/135‑96 (MQ=255) cGAAGCATGAGCACGTTTCTTTGA‑AGACGACGACTGCATGCATctccttcttcttctttgaagatgcggaagatcacgccggtaacttcactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaa < 1:137530‑M1/143‑101 (MQ=255) cGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtg > 1:1024027‑M1/1‑43 (MQ=255) cGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtg < 2:1024027‑M1/95‑53 (MQ=255) cGAAGCAGCGGCATGTTTATTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaa < 2:998950‑M1/143‑101 (MQ=255) gCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgc < 2:1290198‑M1/143‑105 (MQ=255) gCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgc < 2:82477‑M1/143‑105 (MQ=255) cATCGGCGCGGGTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcc < 2:230‑M1/143‑106 (MQ=255) cATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgacgatgcggaagatcacgccggtaactccactgtggcatttcccatccgtgatggtcgtcggtttactctgcgtgcgcgtcccctgcc > 1:1262774‑M1/1‑38 (MQ=255) gCACGTTTCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatcagtgatggtcgtctgtttactctgcgtgagcgtgaactgccctctt > 2:867756‑M1/1‑33 (MQ=255) cGTTTCTTTGA‑AGACGACCACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttc < 1:941641‑M1/143‑114 (MQ=255) tttCTTTGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgt > 1:1039792‑M1/1‑28 (MQ=255) tCTTGGA‑AGACGACGACGGCCCGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcagttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtct < 1:533432‑M1/143‑118 (MQ=255) ttGA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgccaacgctgcgtgagcgtgaactgcccgcttttcgtctgta > 2:106733‑M1/1‑23 (MQ=255) gA‑AGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgctggtcgtctgtttactctgcgcgagcgtgaactgcccgcttttcgtctgcatc > 2:500606‑M1/1‑21 (MQ=255) ggacgacgtcgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgt < 1:1088681‑M1/142‑125 (MQ=255) tctatgacggcctgCATctccttcttcttcttttaagatgcggaagatcacgcgggtaactccactgtggcattgaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtat < 2:1116486‑M1/138‑127 (MQ=255) tGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtctgcgtgcccgtgg > 2:129083‑M1/1‑5 (MQ=255) aTcgccttcttcttcttgggcgacgcggaagttgaggccggtagctccgctgtggcatttaccatccgtgatggtcgtcggttcactctgcgtgagcgtgaactgcccgcttttcgtccgtatcgtatgcgtgcccgtagcca < 1:5697‑M1/143‑142 (MQ=255) | GTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGA‑AGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGT > NC_000913/4001503‑4001784 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |