New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 22874464 (0.950)10 (0.150) 6/272 8.3 14.0% intergenic (+82/‑12) rrlH/rrfH 23S ribosomal RNA of rrnH operon/5S ribosomal RNA of rrnH operon
?NC_000913 2726222 = NA (NA)intergenic (‑36/+57) rrfG/rrlG 5S ribosomal RNA of rrnG operon/23S ribosomal RNA of rrnG operon
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCA  >  NC_000913/228605‑228886
                                                                                                                                           |                                                                                                                                              
tgtAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATaaa                                                                                                                                             >  1:364803/1‑143 (MQ=32)
 gtAAGCGCAGCGATAGGTTGAGCTAACCGGTACTAATGAATCGCGAGGCTTAACGTTACAACGCCGAAGCTGTTTTGGAGGATTGAGAGAAGATTTTCAGCCTTATACAGATTAAATCATAACGCAGAAGCGGTCTGATaaaa                                                                                                                                            <  2:845720/143‑1 (MQ=11)
  tAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGGCGCGGGCTCACaaagc                                                                                                                                           >  1:122641/1‑141 (MQ=11)
  tAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATGAAAc                                                                                                                                           >  2:529927/1‑143 (MQ=17)
    aGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAg                                                                                                                                         >  2:62537/1‑143 (MQ=32)
      cgcAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGaa                                                                                                                                       >  1:122521/1‑143 (MQ=32)
      cgcAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTCCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGaa                                                                                                                                       >  2:10480/1‑143 (MQ=17)
      cgcAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAAATCGTTATCCTTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGaa                                                                                                                                       <  1:858227/143‑1 (MQ=11)
         aGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAAttt                                                                                                                                    <  1:346785/143‑1 (MQ=32)
               gcgcTGAGCGAACCGGTACTAATGCACCGTGAGGCTTACCCTTACAACGCCGAAGCTGTTTTGGCGGACTGAGAGAAGATTTTCAGACTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTgg                                                                                                                              <  1:288281/143‑1 (MQ=11)
                  ttGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCGGTTTTGGCGGAGTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTggcgg                                                                                                                           >  1:838300/1‑143 (MQ=17)
                  gtGAGCTAACCGGTACTAATGAACCGGGAGGCTTAACCGTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATGAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTggcgg                                                                                                                           <  1:376066/142‑1 (MQ=12)
                   ggatccaaCCGGTTCTACTCACACGTGAGGCTTACTCTTACTATGACCATGATGTATTCCGGGTTGACCCAAGCTTTTCAGCCTGATACAGATTAAATCAGCTTGAACCAGCCGTCTGCTAATACCGAATTTGCCTGGCGGcc                                                                                                                         <  2:893687/137‑1 (MQ=2)
                       cTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTa                                                                                                                      >  1:173800/1‑143 (MQ=34)
                       cTAACCGGTACTAATGAACCGTGAGGCTTAACCTGACAACGCCGAAGCTGTTTTGGCGGAGTGAGAGAAGATTTTCAGCCGGATACAGAGTAGATCAGAACGCGGAAGCGGTCGGAGAAGACAGCATTTGCGTggcggcggga                                                                                                                      >  2:26596/1‑139 (MQ=11)
                       cTAACCGGTACTAATGAACCGTGAGGCTGAACCCTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAGAGCAGAGCGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTa                                                                                                                      <  2:266798/143‑1 (MQ=11)
                        tAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAg                                                                                                                     >  1:362592/1‑143 (MQ=34)
                          aCCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCACCCCACAGAAGCGGTCTGCCCACCCAGAACTCGCCTCGCGGCCGTcgcg                                                                                                                   >  1:733491/1‑143 (MQ=11)
                           ccGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCCGAAGCGGTCTGATAAAACAGCATTTGCCTGGCGGCCGCAgcgc                                                                                                                  >  2:1174153/1‑143 (MQ=255)
                              gTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCggc                                                                                                               >  1:1038915/1‑142 (MQ=21)
                              gTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATGTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCggt                                                                                                               <  2:719102/143‑1 (MQ=21)
                               caCTAGTGAAGCGTGAGGCTTAACCGCACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGTAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCggtg                                                                                                              <  1:1081827/142‑1 (MQ=11)
                                 cTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGAAgcgcactgat                                                                                                            >  1:209243/1‑137 (MQ=255)
                                 cTAATGAACCGTGAGGCTTAACCGTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCggtggt                                                                                                            <  1:569943/143‑1 (MQ=21)
                                 attgtaccacGTGAGGCTTAATCCTACAACGCCGAAGCTGTTTTCGCGTATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAGAAAACAGAATTTGCCTGGCGGCCGTAGCGCggtggt                                                                                                            <  2:706347/134‑1 (MQ=11)
                                    aTGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTccc                                                                                                         >  1:919561/1‑143 (MQ=34)
                                      gAACCGCGACGCTTAACCTGACAACGCCGAAGCTGTTCTGGCCAATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCTGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCAc                                                                                                       <  1:83328/143‑1 (MQ=11)
                                         ccGTGAGGCTTAACCTTACAACTCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTg                                                                                                    <  2:989690/143‑1 (MQ=21)
                                               ggCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGGAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCa                                                                                              >  2:949672/1‑143 (MQ=21)
                                                gCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCAt                                                                                             >  1:316072/1‑143 (MQ=34)
                                                 cTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGACGTAGCGCGGTGGTCCCACCTGACCCCacg                                                                                            >  2:659845/1‑141 (MQ=21)
                                                  ttAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCATCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGAGAAAACAGAATTTGCCTGGCGGCCGTAACGAGGAGGTCCCACCTGACCCCATGc                                                                                           >  1:132511/1‑143 (MQ=11)
                                                     aCCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCCCCTGCCCCCATGCGGa                                                                                        >  2:104984/1‑143 (MQ=255)
                                                       cTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAAc                                                                                      >  1:686353/1‑143 (MQ=34)
                                                        tttcAACGCATAAGATGTTTTGGCGGATCGAGATAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGACGCGGTCTGATAAAACAGAATCTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACt                                                                                     <  2:623782/140‑1 (MQ=11)
                                                        ttACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACt                                                                                     >  1:194165/1‑143 (MQ=34)
                                                           cAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGGCCGATAAAACAGAATTTGCCTGGCGGCCGCAGCGCGGTGGTCCCACCTTAACACCTGCCGAACTCAg                                                                                  >  2:1176306/1‑143 (MQ=11)
                                                            aaCGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGa                                                                                 >  1:464256/1‑143 (MQ=34)
                                                            aaCGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGa                                                                                 >  1:460522/1‑143 (MQ=34)
                                                            aaCGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGa                                                                                 >  1:558444/1‑143 (MQ=34)
                                                               gCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCGGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACCCAGCAGt                                                                              >  1:356769/1‑143 (MQ=255)
                                                               gCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGCACTCagtagt                                                                              >  1:355777/1‑143 (MQ=21)
                                                                 tgAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATCAAACACGATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGa                                                                            <  2:1087479/142‑1 (MQ=255)
                                                                 cGATGCTGTTTTGGCGGAGTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACACAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGa                                                                            <  2:578837/143‑1 (MQ=12)
                                                                  gAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTACATCAGAACGCAGAAGCGGTCTGATAAAACAGAATGTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGaa                                                                           <  2:809578/143‑1 (MQ=21)
                                                                  gAAGCTGTTTTGGCGGATTGTAAAATATCTGCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGaaa                                                                          <  2:594482/143‑1 (MQ=11)
                                                                   aaGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGaaa                                                                          <  1:1000275/143‑1 (MQ=34)
                                                                        gTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCg                                                                     >  2:296488/1‑143 (MQ=32)
                                                                         ttttGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGt                                                                    <  1:468838/143‑1 (MQ=32)
                                                                          tttGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTa                                                                   <  2:173800/143‑1 (MQ=32)
                                                                           ttGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGCAACGCCCTAg                                                                  >  1:631193/1‑143 (MQ=17)
                                                                            tGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCAGAACTCAGAAGTGAAACGCCGTAgc                                                                 >  1:147423/1‑143 (MQ=17)
                                                                             ggCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAgcg                                                                >  1:751183/1‑143 (MQ=32)
                                                                                 gATTGAGAGAAGATTCTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGa                                                            <  1:8753/143‑1 (MQ=17)
                                                                                   ttGATAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATg                                                          <  2:1173274/143‑1 (MQ=11)
                                                                                            gtattgcAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTgg                                                 <  2:1131013/137‑1 (MQ=1)
                                                                                                             cgagtAAGTCAGCACGGTGACGCGGTCTGACAAGCCAGACTTGGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGGCCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCgaga                                <  2:1158194/139‑1 (MQ=1)
                                                                                                              gagtAAAGCAGAACGCCGAAGCGGTCTGATAAAACCGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGagag                               <  1:447978/140‑1 (MQ=0)
                                                                                                                              agcaGCGGCCTGATAAAACAGAATTGTCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGc               <  1:189803/140‑1 (MQ=0)
                                                                                                                                      tccgATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAAtt       <  1:69154/140‑1 (MQ=1)
                                                                                                                                      tCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACGGACAgaagtgaaatg       >  1:9572/1‑133 (MQ=1)
                                                                                                                                         gATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAg    <  2:316072/143‑1 (MQ=31)
                                                                                                                                          aTAAAACAGAATTCGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTATACATGAAGGATTATTTAACTGCCAGGCATCAAATTAAGc   <  2:362592/143‑1 (MQ=11)
                                                                                                                                           tAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTTGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCa  <  1:675106/143‑1 (MQ=14)
                                                                                                                                           |                                                                                                                                              
TGTAAGCGCAGCGATGCGTTGAGCTAACCGGTACTAATGAACCGTGAGGCTTAACCTTACAACGCCGAAGCTGTTTTGGCGGATTGAGAGAAGATTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCTGATAAAACAGAATTTGCCTGGCGGCCGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAAGCA  >  NC_000913/228605‑228886

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.