New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3423663 =	NA (NA)	10 (0.150)	6/280	8.5	11.9%	intergenic (‑10/+3)	thrV/rrfD	tRNA‑Thr/5S ribosomal RNA of rrnD operon
	?	NC_000913	= 4171802	75 (1.110)					intergenic (+47/‑254)	rrfB/murB	5S ribosomal RNA of rrnB operon/UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATC  >  NC_000913/3423521‑3423799                                                                                                                                               |                                                                                                                                          cgcgCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCCTATCAGCACGCTAAAtt                                                                                                                                           >  1:30493/1‑143 (MQ=255)  gcgcTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAAttt                                                                                                                                          <  1:543458/143‑1 (MQ=255)    gcTACTGCTGCCAGACAAATTCTGTTCGAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGCGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGa                                                                                                                                        <  1:523934/143‑1 (MQ=255)      tACTGCCGGCAGACAAATGCTTTTCTAAGCGGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATg                                                                                                                                      <  2:663835/143‑1 (MQ=255)      tACTGCCGCCAGACAAATTTTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGATGCTGATACCCAGAGTCGTACCGGGGGTTTCACCCTTTGCAAGGGTGCGCGCTACCAACTGAGCCATATCAGCCCGGAAAATTTGaag                                                                                                                                      >  2:290505/1‑141 (MQ=255)      tACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCCAAAAAGCGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATg                                                                                                                                      <  1:667799/143‑1 (MQ=255)          gccgccAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAACTTTGATGccgg                                                                                                                                  >  1:748791/1‑141 (MQ=255)          gccgccAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTg                                                                                                                                  <  2:977571/143‑1 (MQ=255)             gccAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCCAAATTTGATGCCTGGCa                                                                                                                               <  1:579124/143‑1 (MQ=255)             gccAGACAAATTCTTTTCTAATCTGCAGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTAACCCTTACCAAGGGTGCGCTCTACAAACTGAGCCATATCCGCACGCGAAATCTGCTCCCTGGCa                                                                                                                               >  2:947845/1‑143 (MQ=37)              ccAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAg                                                                                                                              <  2:583135/143‑1 (MQ=255)                aGACAAATTCGTTTCTTAGCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGtt                                                                                                                            <  1:429257/143‑1 (MQ=255)                    aaaTTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCACt                                                                                                                        >  1:904109/1‑143 (MQ=255)                     aaTTCTTTTCCAATCTGCCTAACTTTAACCTAAAAATTTGTGCTGATACCCAGAGTCGAACTGGCGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTa                                                                                                                       <  1:236626/143‑1 (MQ=37)                      aTTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTAc                                                                                                                      >  1:464257/1‑143 (MQ=255)                       ttCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCATCACGCTCAATTTGATGCCTGGCCGTTCCCTAct                                                                                                                     >  1:554775/1‑143 (MQ=255)                          ttttCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTTATACACAGAGTCGAACTGAGGACCTCACCCTTACCAAGGGTCCGCTCTACCAAATGAGCGATATCAGCACGCCAACATTGCTGGTTGGCTGTTCCCGAcgc‑ta                                                                                                                 >  2:1075018/1‑142 (MQ=18)                           tttCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCg                                                                                                                >  2:151157/1‑143 (MQ=255)                             tctcgtCTGCCTAACTTTTACCTAAACAGTTGTGCTGATACCCAGAGTCGACCTCGCGACCTCACCCCTACCAAGGGTGCGCTCTACGAACTGCGCCATAGCAGTAGGCTAGATTTGATGCCTGGCAGTTCCCTACTC‑TCGCa                                                                                                              <  2:142157/138‑1 (MQ=255)                                aaTCTGCCGAACTTTAACCTAAAACGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCATTACCATGCGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATgg                                                                                                           <  2:637874/143‑1 (MQ=255)                                    tGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGAGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTAATGCCTGACAGTTCCCTACTC‑TCGCATgaggag                                                                                                       >  2:689660/1‑143 (MQ=255)                                     gCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGgaga                                                                                                      <  2:966663/143‑1 (MQ=255)                                            tttAACCTAAAAAGTGGTGCTGATCCCCAGAGTCGAACTGGGGACCTCACCCTTACCCACGGTGCGCTCTACCAACTGAGCCCTATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTGCTC‑TCGCGTGGGCGGACCCccca                                                                                               >  1:470939/1‑143 (MQ=37)                                            tttAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGCGCCATATCAGCACGCTAAACTTGATGCCTGGCAGTTCCCAACTC‑TCGCATCGGGAGACCCcaca                                                                                               >  2:724669/1‑143 (MQ=255)                                            tttAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCCTGCGGCGACCCcacg                                                                                               >  2:949528/1‑142 (MQ=255)                                            tttAACCTAAAAAGTGGTGCTGATACCCAGAGCCTCACGATGAACCTCACCCTTACCAAGGGTGCGCTCTACGAACCGAGCCATACCAGCACGCTAAAATTTAGGCCTGCCAGTTCCCTACTC‑TCGCATGGGGAGACCCcaca                                                                                               >  2:576346/1‑143 (MQ=25)                                                  cTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCa                                                                                         >  1:718574/1‑143 (MQ=255)                                                   tAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCCTGGGGAGACCCCACACTACCAt                                                                                        >  2:857804/1‑143 (MQ=255)                                                   tAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCAt                                                                                        >  1:641920/1‑143 (MQ=255)                                                   tAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCAt                                                                                        >  1:359756/1‑143 (MQ=255)                                                            gtgCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTAACCACTGAGCCATATTAGGACCCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCCCACTACCATCGGCGCTAc                                                                               >  1:545471/1‑143 (MQ=25)                                                                tGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCCGTTACATTCCG‑GCCCAGTGGGGGGCCCCACACTACCATCGGCGCTACGGCg                                                                           >  1:537060/1‑143 (MQ=25)                                                                tGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTTGTTGCGC‑CCGCAAGGGGAGCCCCCACACTACCATCGGCGCTACGGCg                                                                           >  1:537055/1‑143 (MQ=37)                                                                tGATACCCAGAGTCGAACTGGGGACCTCACCCTTAACCACGCGCCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGATCCCTACCC‑TCCCAGGGGGAGACGCCACACGACCACGGGCGCTCCGGCg                                                                           >  2:1149720/1‑143 (MQ=255)                                                                   tACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCATGGCAGTTCCCTCCTC‑TCGCATGGGGAAACCCCACCCCACCCTCGACGCTACGGCgcct                                                                        >  2:90330/1‑140 (MQ=37)                                                                        agagTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACtt                                                                   >  1:513059/1‑143 (MQ=255)                                                                               aaCTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGtt                                                            >  2:268273/1‑143 (MQ=255)                                                                               aaCTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCAC‑ACACATAACTTTTGGTGGCCACACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGtt                                                            >  1:1166893/1‑143 (MQ=25)                                                                                    gggACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGCCCCCACACTCCCATCGGCGCTCCGGCGTTTCACGTCTGAGTTCGGcg                                                       >  1:237424/1‑142 (MQ=255)                                                                                    gggACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCATCGGCGCTACCGCGTTTCCCTTCTGGGTTCGGCa                                                       >  1:957001/1‑143 (MQ=255)                                                                                    gggACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAACTTGATGCCTGGCAGTTCCCTACTC‑TCGCCTGGGGAGACCCCACCCTACCATCGACGCTCCGGCGTTTCACTTCTGGGTTGGGCa                                                       >  2:734146/1‑143 (MQ=25)                                                                                       aCCTCACCCTGACCAAGGGTGCGCTCCCCCAACTGAGCCATAGCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACAC‑TCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATgg                                                    <  1:220419/143‑1 (MQ=18)                                                                                        ccTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATggg                                                   <  1:576346/143‑1 (MQ=255)                                                                                        ccTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTGGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCCGAGTTCGACGTggg                                                   >  2:378443/1‑143 (MQ=255)                                                                                         cTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACCACCATCGGCGCTACGGCGCTCCACTTCCGAGTACGGCGTgggc                                                  >  2:1165318/1‑142 (MQ=21)                                                                                            aCCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTGACTTCTGAGTTCGGCAGGGGGGCa                                               >  1:391930/1‑143 (MQ=255)                                                                                                   ccAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTGCACTTCTGACTTCGGCATGGGATCCGGTGGGa                                        >  2:732537/1‑143 (MQ=255)                                                                                                    cagtggTGCGCTCTACCAACTGAGCCATACCAGCACGCTAAATTTTATGCCTGGCAGTACCGCGCCC‑ACCGATGTCGACACCCCACGATACCCTCTGCGCTAACGCGTCGCTCTTCCGATCTCGGCATGGGGTCAGGTGGGac                                       <  2:531100/139‑1 (MQ=255)                                                                                                    cAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGac                                       >  2:285349/1‑143 (MQ=255)                                                                                                     aaGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTGCGGCATGGGGTCAGGTGGGacc                                      >  1:730196/1‑143 (MQ=255)                                                                                                              ctctACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTa                             >  1:958435/1‑143 (MQ=255)                                                                                                                ctACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACg                           <  2:537060/143‑1 (MQ=255)                                                                                                                ctACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACg                           <  2:537055/143‑1 (MQ=255)                                                                                                                   ccAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGAGCTACGgcc                        >  1:1096560/1‑143 (MQ=255)                                                                                                                          aGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGc                 >  2:363029/1‑143 (MQ=255)                                                                                                                          aGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCAGCCAGGc                 >  1:422398/1‑143 (MQ=255)                                                                                                                            ccATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGCGTTCGGCCTGGGGTCAGGTCGGACCACCGCGCTCCGgccgcacggcga               >  2:862234/1‑136 (MQ=14)                                                                                                                            ccATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGAAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGTGACCACCCCGCTACGGCCGCCAGGGaa               >  2:381322/1‑143 (MQ=255)                                                                                                                              atatCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTCAGCTCGGCATGGGATCCGGTGGGACCACCGCCCTACGGCCGCCAGGCacgt             >  2:947682/1‑140 (MQ=14)                                                                                                                               tatCAGCACGCCAAATGCGATGCCTGGCGGTGCCCGACTC‑TCGCATGGGGAGTCCCCACACTGCCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAAtt            <  1:190838/143‑1 (MQ=11)                                                                                                                                     cACGCTAAGTTTGACGCCTCGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGttt      <  1:821917/143‑1 (MQ=255)                                                                                                                                     cACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGttt      >  2:79778/1‑143 (MQ=35)                                                                                                                                        gCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGtgttct   >  2:608392/1‑141 (MQ=17)                                                                                                                                         cTAAAGTTGCTGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGCTTCACTTCTGAGTTCTGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATc  <  1:290505/143‑1 (MQ=255)                                                                                                                                               |                                                                                                                                          CGCGCTACTGCCGCCAGACAAATTCTTTTCTAATCTGCCGAACTTTAACCTAAAAAGTGGTGCTGATACCCAGAGTCGAACTGGGGACCTCACCCTTACCAAGGGTGCGCTCTACCAACTGAGCCATATCAGCACGCTAAATTTGATGCCTGGCAGTTCCCTACTC‑TCGCATGGGGAGACCCCACACTACCATCGGCGCTACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATC  >  NC_000913/3423521‑3423799

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.