Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,001,644 Δ5 bp coding (220‑224/951 nt) corA → magnesium/nickel/cobalt transporter

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4001644 4001648 5 41 [0] [0] 41 corA magnesium/nickel/cobalt transporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40016430 (0.000)41 (0.610) 34/284 1.3 100% coding (219/951 nt) corA magnesium/nickel/cobalt transporter
?NC_000913 4001649 = 0 (0.000)coding (225/951 nt) corA magnesium/nickel/cobalt transporter

ATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCC  >  NC_000913/4001505‑4001781
                                                                                                                                          |                                                                                                                                          
aTGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcc                                                                                                                                        <  1:735324‑M1/143‑5 (MQ=255)
aTGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcc                                                                                                                                        <  1:651676‑M1/143‑5 (MQ=255)
  ggATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcctt                                                                                                                                      <  1:749589‑M1/143‑7 (MQ=255)
    aTTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttct                                                                                                                                    >  1:949571‑M1/1‑135 (MQ=255)
          ctcgtcgAGCCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttct                                                                                                                              <  2:916818‑M1/140‑15 (MQ=255)
           ttGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGCACTGGCAGACATCGAAGCATCGGCCCGTTTCTTTGAAGACGCCGCAGGCCTGCATctccttcttcttctt                                                                                                                             >  1:427089‑M1/1‑128 (MQ=255)
             gctgaacCTGACGAGGAGGGGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttg                                                                                                                           <  2:379541‑M1/140‑18 (MQ=255)
                gAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCCCGTTTCTTTGACGACGACGCCGGCCTGCATcctcttcttctccattcaag                                                                                                                        >  1:135916‑M1/1‑123 (MQ=255)
                        cgaggacgcGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCTGCCTGCAACTTGAAGACATCGAAGCATCGGCACGTTTCTGTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaa                                                                                                                <  2:1018795‑M1/143‑29 (MQ=255)
                          atcacgggcgACTGCGTGTACAATCTGAACTTGGCCAGAGCCTGGCACCCCCCCCTGAACTGGAAGACATCGAAGCATCGCCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaaga                                                                                                              <  2:191662‑M1/140‑31 (MQ=255)
                               gaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacg                                                                                                         >  2:937915‑M1/1‑108 (MQ=255)
                                 gCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgcc                                                                                                       >  2:913408‑M1/1‑106 (MQ=255)
                                                aTCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtg                                                                                        <  1:584878‑M1/143‑53 (MQ=255)
                                                 tCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtgg                                                                                       >  1:248416‑M1/1‑90 (MQ=255)
                                                 tCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGAACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactacactgtgg                                                                                       >  1:10‑M1/1‑90 (MQ=255)
                                                       ctgggccaGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcattta                                                                                 <  2:221257‑M1/140‑60 (MQ=255)
                                                       cgtggCCAGAGCCTGGCAACCCGCCGGGAACGGGAAGACATCGAAGCATCGGCACGTTGCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcattta                                                                                 <  2:982218‑M1/141‑60 (MQ=255)
                                                       cTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcctgcttcttctttgaagatgcggaagatcacgccggtacctccactgtggcattta                                                                                 <  1:941390‑M1/143‑60 (MQ=255)
                                                        ttGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgacgctgcggaagctcaccccggtcactccactgcggcatttac                                                                                >  2:268770‑M1/1‑83 (MQ=255)
                                                          ggCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttacaa                                                                              >  1:799335‑M1/1‑81 (MQ=255)
                                                                agCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaggatcacgccggtcactcccctgcggcacttcccatccgtg                                                                        >  2:740449‑M1/1‑75 (MQ=255)
                                                                agCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTATTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtg                                                                        >  1:602619‑M1/1‑75 (MQ=255)
                                                                 gCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGCAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtga                                                                       <  1:141293‑M1/143‑70 (MQ=255)
                                                                 gCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtga                                                                       <  1:1133527‑M1/143‑70 (MQ=255)
                                                                    tGGCCACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAGctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatgg                                                                    <  2:1002048‑M1/143‑73 (MQ=255)
                                                                      gCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCATGCATctacttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatcagtgatgggc                                                                  >  1:174950‑M1/1‑69 (MQ=255)
                                                                        aaCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgt                                                                <  1:671817‑M1/143‑77 (MQ=255)
                                                                           ccgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgacgatgcggaagatcgcgccggtaactccacactgtctgtttttatccgtgctggtcgtctg                                                             >  1:733149‑M1/1‑64 (MQ=255)
                                                                             gcccgGAACTGGAAGACATCGCAGCTTCGGCACGTTTCTGTGAAGACCACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtt                                                           <  2:1082697‑M1/143‑82 (MQ=255)
                                                                             gcccgGAACTGGAAGACATCGAAGCATCGGCGCGTGTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtt                                                           <  1:911768‑M1/143‑82 (MQ=255)
                                                                                         aggacATGGAAGCATCGGTACTTTTCTTTTAAGACTACGACGGCCTGCATctctttcttcttctttgaagatgcggaagatcactccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtga                                               <  2:976473‑M1/141‑94 (MQ=255)
                                                                                                cGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaaattcactgtggcatttcccatccgtgatcgtcgtgtgtttactcggcgtgagcgtgcg                                        >  2:234695‑M1/1‑43 (MQ=255)
                                                                                                     cATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcc                                   >  1:113412‑M1/1‑38 (MQ=255)
                                                                                                           cccgtTTCTGTGAATACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttt                             <  1:1040392‑M1/141‑112 (MQ=255)
                                                                                                              gTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcg                          <  1:148832‑M1/143‑115 (MQ=255)
                                                                                                               tttCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgg                         >  1:1158215‑M1/1‑28 (MQ=255)
                                                                                                                ttCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccattcgtgatggtcgtctgattactctgcgtgagcgtgaactccccgcctttcgtc                        >  2:316654‑M1/1‑27 (MQ=255)
                                                                                                                 tCTTTGAAGACTACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtct                       <  2:602619‑M1/143‑118 (MQ=255)
                                                                                                                     tGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtat                   >  1:566362‑M1/1‑22 (MQ=255)
                                                                                                                            gccgacggcCTGCATcgccttcttcttcttggaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgacctgcccgcttttcgtctgtatcgtatgc            <  1:1153284‑M1/141‑129 (MQ=255)
                                                                                                                                      tGCTTctccttcttctgctgtgaagatgcggaagttcacgccggtttttccactgtggcatttaccatccgggatggtcgtctgtttactctgcgtgcgcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtag  <  2:758014‑M1/143‑139 (MQ=255)
                                                                                                                                          |                                                                                                                                          
ATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCC  >  NC_000913/4001505‑4001781

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.