| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 962,982 | G→C | V330L (GTT→CTT) | rpsA → | 30S ribosomal subunit protein S1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 962,982 | 0 | G | C | 98.9% | 279.4 / NA | 87 | V330L (GTT→CTT) | rpsA | 30S ribosomal subunit protein S1 |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (41/45); minor base T (0/1); total (41/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGTGACCAACCTGACCGACTACGGCTGCTTCGTTGAAATCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAAGTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGGCAGCAGTTCGCGGAAACCCACAACAAGGGCGACCGTGTTGAAGGTAAAATCAAGTCTATCACT > NC_000913/962843‑963119 | cgTGACCAACCCGACCGCCTACGGCTGCTTCGTTGAAATCGAAGAAGCCGGTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTa < 2:877952/143‑1 (MQ=255) ccAACCTGACCGACTACGGCTGCTTCGTTGAAATCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGtt > 2:79802/1‑143 (MQ=255) cAACCTGACCGACTACGGCTGCTTCGTTGAAATCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTc > 2:38764/1‑143 (MQ=255) cAACCTGACCGACTACGGCTGCTTCGTTGAAATCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTACGGTTc > 2:1128052/1‑143 (MQ=255) aaCCTGTCCGACTACGGTTGCTGCGTTGAAATCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCt < 2:1110916/143‑1 (MQ=255) aaCCTGACCGACTACGGCTGCTTCGTTGAAATCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCt < 1:554167/143‑1 (MQ=255) aaCCTGACCGACTACGGCTGCTGCGTGGAAGTCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCt < 2:280051/143‑1 (MQ=255) tGACCGACTACGGCTGCTTCGTTGAAATCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAGCGTTGACAATGAAGGGGCACTTACGGTTCTAGat > 2:1077795/1‑143 (MQ=255) gACCGACTACGGCTGCTTCGTTGAAATCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGata > 2:1041331/1‑143 (MQ=255) aCTACGGCTACTTCGTATATAGCGAAGAAGGCGTTGGAGGCCGGGTACACGTTTCCGAAATGGACTGGACCAACAACCCCCTCCTCCCGTCCAAAGTTTTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATcgac < 2:708930/143‑1 (MQ=255) aCTACGGCGGCTTCGTTGAAATCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATcgac < 1:172025/143‑1 (MQ=255) cTACGGCTGCTTCGTTGAAATCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATcgacg < 1:476007/143‑1 (MQ=255) cTACGGCTGCTTCGTTGAAATCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGCACTGGACCAACAAAAACATCCACCCGTCCACAGTAGTTCACGTTGGCGATGAAGTGGAACTTATGGTTCTGGATATcgacg > 2:803886/1‑143 (MQ=255) tACGGCTGCTTCGTTGAAATCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATcgacga < 1:909354/143‑1 (MQ=255) tACGGCTGCTTCGTTGAAATCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATcgacga > 2:1150655/1‑143 (MQ=255) tACGGCTGCTTCGTTGAAATCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTCGCTAACGGTGGCGACGTTGTGGCACTCATGACTCTGGATATcgacga > 1:537896/1‑143 (MQ=255) tACGGCTGCTGCGATGAAAGCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATcgacga < 2:80867/143‑1 (MQ=255) tACGGCGGCTGCGTTGAAATCGAAGAAGGCGTTGAAGGCCGGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATcgacga < 2:823703/143‑1 (MQ=255) cGGCTGCTTCGTTGAAATCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTTTGGACAGAACACAAACAACAAAACCATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTCATGGTTCTGGATCTCGACgaag > 2:522142/1‑143 (MQ=255) ggCTGCTTCGTTGAATTGGGAGTATGCGGTGAAGGCCTGGTACACGTCGCCGAAAGGGACTGTACCAACAAAAACATCCGCCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACgaaga < 2:1074992/143‑1 (MQ=255) gctgctTCGTTGAAATCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACgaagaa < 1:844250/143‑1 (MQ=255) ctgctTCGTTGAAATCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAAc < 1:1069616/143‑1 (MQ=255) ctTCGTTGAAATCGAAGAAGGCGTTAAAGGCCAGGTTCGCGTTTCCGAAATGGACTGGACCAAGAGAAACATCCACCCGTCCAAAGTTGGTAACGTTGGCGATGTAGTGGAACTTATGGGTCTGGATATCGACGGAGAAccag > 2:143945/1‑140 (MQ=255) ttCGTTGAAATCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAccgccg > 2:738691/1‑143 (MQ=255) cgttacaaTCGAAGAAGGCGGTGAAGACCCGGTACACGTTTCCGAAATGGACTGGACCAACAAATACATCCACCCTGCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAAcgtcgtc < 2:885758/137‑1 (MQ=255) gtgtaaaTCGAAGGCGGCGTTGCAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAAcgtcgtcg < 2:907928/139‑1 (MQ=255) gTTGAAATCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAacgacgacg > 1:722533/1‑143 (MQ=255) tGAAATCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTa < 1:38764/143‑1 (MQ=255) gAAATCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGCACGTCGTCGTAt > 1:330380/1‑143 (MQ=255) aaaTCGAAGAAGGCGTTGAAGGCCTGGTACACGTTACCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGCTAACGTTGGCGAAGTAGTGGAACGTAGGGTTCTGGATACCGACGAAGAAcgatgtggaatc > 2:803028/1‑133 (MQ=255) aaTCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGAAATCGACGAAGAAcgccggcctaccc > 2:910459/1‑135 (MQ=255) aTCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATGTCGACGAAGAACGTCGTAGTAtcgc > 1:560258/1‑141 (MQ=255) tCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTcc > 2:224634/1‑143 (MQ=255) tCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTCCTGCATAGCGACGACGAACGTCGTCGTAtctac > 2:69681/1‑141 (MQ=255) cGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTccc > 1:1091842/1‑143 (MQ=255) cGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTccc > 1:1089870/1‑143 (MQ=255) aagaagGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGGCGTATCTCCCTg > 1:1146769/1‑143 (MQ=255) aagTCGGTGAAGGCCTGCTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGt < 2:794482/143‑1 (MQ=255) cGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGa < 2:1050410/143‑1 (MQ=255) cGTGGAAGGCCTGGTACACGTGTCCGGAATGGACTGGACCAACAAAAACATCCACCCGTCGAACGTTGTTAGCGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGa < 2:897243/143‑1 (MQ=255) ttGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTACCGTTGGCGATGTAGTGGAACTTCTGGTTCTGGATATCGCCGAAGCACGTCGCCGTCTCTCCCCGGGCCGGaaa > 2:1001276/1‑143 (MQ=255) gtggaGGACTGGTCCACGCTTCCGGAATGGCATGGACCAACAAACACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGaaa < 2:810232/139‑1 (MQ=255) gAAGGCCTGGTCCACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACa < 1:1041331/143‑1 (MQ=255) gAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGGTATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACa < 2:1037051/143‑1 (MQ=255) gAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACa < 2:725665/143‑1 (MQ=255) gAAGGCCGGGTACACGTCTCCGAAGTGGACTGGACGAACAAAAACAACCACCCGTCCAAAGTTGTTAACGTGGGCGATGTAGTCGAACTTATGGTGCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACa < 2:1034767/143‑1 (MQ=255) aaGGCCTGGTACACGTTTCCGAAATGGACTGGGCCAACAAAAGCATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGGGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGGCGTATCTCCCTGGGTCTGCAACAg > 2:388926/1‑143 (MQ=255) ggCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTg < 1:100116/143‑1 (MQ=255) gCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTCTGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACGGTGc > 2:273944/1‑143 (MQ=255) cTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACAGCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCaa < 2:121390/143‑1 (MQ=255) cTGGTACACGTTTCCGAAATGGACGGGACCAACAAAAACATCCGCCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCaa < 2:246488/143‑1 (MQ=255) tACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCt < 1:177310/143‑1 (MQ=255) acGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAAc > 2:323911/1‑143 (MQ=255) gTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAACGTTGTTAACGTTGGCGATGTAGTGGAACCTATGGCTCTGGATATCGACGAAGAACGTGGTAGTCTATCCCTGTGGCTGAAACAGTGCGCAGCCAAccc > 2:219683/1‑143 (MQ=255) ttCCGAAATGGCGTGGACCAACAAAAACATCCTCCCGTCACTTGTTGGTGTGCGTGGCGATTTAGTGTAATTTATCGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGt < 1:1114362/143‑1 (MQ=255) ccGAAATGGACTGGACCAACGAAAACATGCACCCGTCCAAAGTTGTTAACGTGGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTgg < 2:430244/143‑1 (MQ=255) cGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGACGAACGTCGCCGTATCTCCCTAGGACTGAAACAGTACAAACCTAACCCgcagc > 2:282512/1‑139 (MQ=255) cGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGGCGTACCCCCCCGGGGCTGAAACAGCGCAAAGCTACCCCGTGgc > 2:346452/1‑143 (MQ=255) gAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGCTGTAGTGGACCTTAGGGTTCTGAATATCGACGAAGAACGTCGTCGTATCTCCCTGCGGCTGAAAACGTGCAAAGCTAACCCGTGgca > 2:35557/1‑143 (MQ=255) attgccgggacCAACGAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGgcagca < 2:269653/136‑1 (MQ=255) aTGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGgcagca > 1:1008931/1‑143 (MQ=255) gactggagCAACAAAAACGTCCACCCGGCCAAAGGTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGAGGCAGCAGtt < 1:786848/143‑1 (MQ=255) gactggacCAACAAAAACATCGTTCCGTCCAAATGTGTTAACGTTAGCGTTGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAGACAGTGCAAAGCTAACCCGTGGCAGCAGtt < 1:733092/143‑1 (MQ=255) tggtcccataacaaCCTCCGCCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGGCGTCGTATCTCCCTGGGTCTGAAACAGTGAAAACCTAACTCGTGGCAGCAGTTcgc < 2:474437/131‑1 (MQ=255) ggacCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGGCAGCAGTTcgcg > 1:528116/1‑143 (MQ=255) acCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGGCAGCAGTTCGCGGa > 1:494876/1‑143 (MQ=255) acCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACACGTAGCAGCAGTTCGCGGa > 1:135812/1‑143 (MQ=255) caacaaAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGGCAGCAGTTCGCGGaaa > 1:798838/1‑143 (MQ=255) aacaaAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACTAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGGCCGCAGTTCGCGGAAAc > 1:440945/1‑143 (MQ=255) aaaaaCATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGGCAGCAGTTCGCGGAAACCca > 1:18694/1‑143 (MQ=255) aaaaaCATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGGGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGGCAGCAGTTCGCGGAAACCca < 1:663122/143‑1 (MQ=255) aaaaCATCTACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGCCGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGGCAGCAGTTCGCGGAAACCcac < 1:554832/143‑1 (MQ=255) aaaaCATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCACAATGCCCGCTAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGGCAGCAGTTCGCGGAAACCcac < 1:542061/143‑1 (MQ=255) aaaCATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCAGTGGCAGCAGTTCGCGGAAACCcacc > 1:242443/1‑142 (MQ=255) aggcgtgcGTCCGAAGTTGTGAACGTTGGCGAGGTGGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGGCAGCAGTTCGCGGAAACCCAcaacaa < 2:690859/136‑1 (MQ=255) aTCCACCCGTCCAAAGTTGTTAACGTTGGCGACGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGGCAGCAGTTCGCGGAAACCCAcaacaa > 2:614510/1‑143 (MQ=255) ccACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCGGGGTCTGAAACAGTGCAAAGCTAACCCGTGGCAGCAGTTCGCGGAAACCCACAACAAgg < 2:118415/143‑1 (MQ=255) aCCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGGCAGCAGTTCGCGGAAACCCACAACAAGGGc > 1:1074155/1‑143 (MQ=255) cAAAGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGGCAGCAGTTCGCGGAAACCCACAACAAGGGCGACCgtg < 1:943578/143‑1 (MQ=255) aaaGTTGTTAACGTTGGCGATGTAGTGGAACTTATGGTTCTGAATATCGACGAAGAACGTCATCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCTGTGGCAGCAGATCGCGGAAACCCAcaacaaagaagagcgagt > 2:80836/1‑131 (MQ=255) ttgttAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGGCAGCAGTTCGCGGAAACCCACAACAACGGCGACCGCGTTGaa > 2:1059190/1‑143 (MQ=255) tgttAACGTTGGCGATGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGGCAGCAGTTCGCGGAAACCCACAACAAGGGCGACCGTGTTGAAg < 1:1150655/143‑1 (MQ=255) gCGAGGTAGTGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGGCAGCAGTTCGCGGAAACCCACAACAAGGGCGACCGTGTTGAAGGTAAAATCAAg < 1:164345/143‑1 (MQ=255) cGATGTAGGGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGGCAGCAGTTCGCGGAAACCCACAACAAGGGCGACCGTGTTGAAGGTAAAATCAAGt < 2:916724/143‑1 (MQ=255) tGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGGCAGCAGTTCGCGGAAACCCACAACAAGGGCGACCGTGTTGAAGGTAAAATCAAGTCTATCACt < 2:18694/143‑1 (MQ=255) tGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGGCAGCAGTTCGCGGAAACCCACAACAAGGGCGACCGTGTTGAAGGTAAAATCAAGTCTATCACt < 2:1089870/143‑1 (MQ=255) tGGAACTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGGCAGCAGTTAGCGGAAACCCACATCATGGGCGACCGTGTTGAAGGTAAAATCAAGTCTATCACt < 2:1091842/143‑1 (MQ=255) | CGTGACCAACCTGACCGACTACGGCTGCTTCGTTGAAATCGAAGAAGGCGTTGAAGGCCTGGTACACGTTTCCGAAATGGACTGGACCAACAAAAACATCCACCCGTCCAAAGTTGTTAACGTTGGCGATGTAGTGGAAGTTATGGTTCTGGATATCGACGAAGAACGTCGTCGTATCTCCCTGGGTCTGAAACAGTGCAAAGCTAACCCGTGGCAGCAGTTCGCGGAAACCCACAACAAGGGCGACCGTGTTGAAGGTAAAATCAAGTCTATCACT > NC_000913/962843‑963119 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |