Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 257,908 Δ776 bp [crl] [crl]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 257908 258683 776 76 [0] [2] 80 [crl] [crl]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2579070 (0.000)73 (1.150) 59/268 0.0 100% intergenic (+8/‑769) crl/crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers
?NC_000913 258684 = 0 (0.000)pseudogene (9/331 nt) crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator,regulator, Surface structures, transcriptional regulator of cryptic csgA gene for curli surface fibers

CCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGT  >  NC_000913/258544‑258826
                                                                                                                                            |                                                                                                                                              
ttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgccgttaccgagtggacacccgaagagcagattggtcaaaaaatgtacggcactgggcccgtatattcgtgagggtaAGt                                                                                                                                              >  2:404066‑M2/141‑143 (MQ=255)
ttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGt                                                                                                                                              <  2:1004053‑M2/3‑1 (MQ=255)
ttaaaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGt                                                                                                                                              <  1:810621‑M2/3‑1 (MQ=255)
ttaaaaatttgctaaagtttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGt                                                                                                                                              <  1:902653‑M2/3‑1 (MQ=255)
  gcaaatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGc                                                                                                                                            <  2:681997‑M2/5‑1 (MQ=255)
     aatttgctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgtaaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaagcccgtataatcgtgaaggtaAGTGCaaa                                                                                                                                         >  1:403130‑M2/136‑143 (MQ=255)
          gctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATaa                                                                                                                                    <  2:1046861‑M2/13‑1 (MQ=255)
           ctaaattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAAt                                                                                                                                   <  1:583501‑M2/14‑1 (MQ=255)
            taattttcgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATc                                                                                                                                  <  1:705984‑M2/15‑1 (MQ=255)
              aattttgccaatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGa                                                                                                                                >  1:333348‑M2/127‑143 (MQ=255)
                      caatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCttttt                                                                                                                        >  2:1002998‑M2/119‑143 (MQ=255)
                       aatttggtaaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTc                                                                                                                       >  2:1131049‑M2/118‑143 (MQ=255)
                              taaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgacgggaAGTGCAAAGATAATCGATTCTTTTTCGATTGTc                                                                                                                >  2:196597‑M2/111‑143 (MQ=255)
                               aaaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAACGATAATCGATTCTTTTTCGATTGTCt                                                                                                               >  1:790410‑M2/110‑143 (MQ=255)
                                aaacagttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTg                                                                                                              >  2:703897‑M2/109‑143 (MQ=255)
                                   cggtgggatcacaaaaggggatagcaatgacgttactgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcctgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCTATTGTCTGGCt                                                                                                           <  1:176965‑M2/38‑1 (MQ=255)
                                   cagttgcatcaccacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaattgaccgcactaggcccctatattcgttaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCt                                                                                                           <  2:411998‑M2/38‑1 (MQ=255)
                                    agttgcatcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTCCAAAGATAATCGATTCTTTTCCGAatatctacata                                                                                                          >  2:1121067‑M2/105‑138 (MQ=255)
                                         catcacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgcatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGc                                                                                                     >  1:299758‑M2/100‑143 (MQ=255)
                                            cacaacaggagatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTc                                                                                                  >  2:416720‑M2/97‑143 (MQ=255)
                                              cggcggtggttagcattggcgttaccgtgtggacacctgtagcgcagattgatcaaagaatttaccgcacttggtccgtatattcgtgacggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCaa                                                                                                <  1:797574‑M2/49‑1 (MQ=255)
                                                   ggagatagcaatgacgttactgagtggacacccgaagagcaaagttatcgaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGa                                                                                           <  2:431584‑M2/54‑1 (MQ=255)
                                                     agatagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGaaa                                                                                         <  2:540690‑M2/56‑1 (MQ=255)
                                                        tagcaatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCg                                                                                      <  2:950234‑M2/59‑1 (MQ=255)
                                                           caatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatcttcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGGCAAAGTGAAACAGGCa                                                                                   >  2:66467‑M2/82‑143 (MQ=255)
                                                           caatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTcaacgggaatgctgta                                                                                   >  2:1029939‑M2/82‑136 (MQ=255)
                                                           caatgacgttacagagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAAGCGATTCGTTTTCGATTGTATGGCTATATGCGACAACGTGAAAACGGCa                                                                                   >  1:957314‑M2/82‑143 (MQ=255)
                                                            aatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCCACGTGAAACCGGCAc                                                                                  >  2:685547‑M2/81‑143 (MQ=255)
                                                            aatgacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGACTGTATGCGTCAACGTGAAACCGGCAc                                                                                  >  2:1130699‑M2/81‑143 (MQ=255)
                                                            aatgacgtgaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCAc                                                                                  <  2:42244‑M2/63‑1 (MQ=255)
                                                               gacgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGGCAACGTGAAACCGGCACCgg                                                                               >  1:707165‑M2/78‑143 (MQ=255)
                                                                 cgttaccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtcAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGaa                                                                             <  2:166088‑M2/68‑1 (MQ=255)
                                                                      ccgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCg                                                                        <  2:1008736‑M2/73‑1 (MQ=255)
                                                                       cgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGt                                                                       <  2:124420‑M2/74‑1 (MQ=255)
                                                                       cgagtggacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtacattcgtgaaggtcAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCAGCACCAGACGGGCGt                                                                       >  1:639726‑M2/70‑143 (MQ=255)
                                                                             gacacccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTc                                                                 >  1:781488‑M2/64‑143 (MQ=255)
                                                                               caccggaagagcagattgactaaaaactttaccgcactcggcccgtatattcgtgaaggtaGGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTTTGCGTAAACGTGAAGCCGGCACCGGAAGTGCGTGAATCCTg                                                               <  1:1017969‑M2/82‑1 (MQ=255)
                                                                                acccgaagagcagattgatcaaaaaatttaccgcactaggtccgtatattcgtgaaggtaAGTGAAAAGAGAGTTGAGTCTTGTACGAATGTCTGGCTGTCTGAGTCAACGTGAAACCGGCACCGGAAGTGTGTGAATTCTgg                                                              <  2:1137572‑M2/83‑1 (MQ=255)
                                                                                  ccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTgggg                                                            <  2:916823‑M2/85‑1 (MQ=255)
                                                                                  ccgaagagcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTgggg                                                            >  2:980003‑M2/59‑143 (MQ=255)
                                                                                        agcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGTGGCttgtg                                                      >  2:123109‑M2/53‑143 (MQ=255)
                                                                                        acacgatcgatccaacaatttaccgcgccacgcccgtatattcgtgaaggtaAGTGCAAACATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCtggtg                                                      <  2:805222‑M2/91‑1 (MQ=255)
                                                                                         gcagattgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCtggtgg                                                     >  1:532732‑M2/52‑143 (MQ=255)
                                                                                          cagattgatcaaaaaatttaccgcactaggaccgtatatgcgtgaaggtaTCAATGAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtgga                                                    <  2:1153897‑M2/93‑1 (MQ=255)
                                                                                             attgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggatgg                                                 <  2:398119‑M2/96‑1 (MQ=255)
                                                                                              ttgatcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGtggatgga                                                >  2:757736‑M2/47‑143 (MQ=255)
                                                                                                ggtcaaaagagttaccgctctaggcccgtatattcgtgaaggtaAGTTGAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGc                                              <  1:403003‑M2/99‑1 (MQ=255)
                                                                                                 atcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAGAGATGATCGATTCTTTTGCGATTGGCTGGCTGTATGAGCCAACGTGAGACCGGCACCGGAAGTGAGTGAATTCTGgggctggtggagtgggct                                             >  1:461935‑M2/44‑136 (MQ=255)
                                                                                                  tcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTg                                            >  1:1050099‑M2/43‑143 (MQ=255)
                                                                                                  tcaaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTg                                            >  2:559231‑M2/43‑143 (MQ=255)
                                                                                                   caaaaaatttaccgcattaggcccgtatattcgggaaggtaAGTGCAAAGATAATCGATTCTTTTTCGAGTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTgg                                           <  1:34206‑M2/102‑1 (MQ=255)
                                                                                                    aaaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGa                                          >  2:845330‑M2/41‑143 (MQ=255)
                                                                                                     aaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGaa                                         <  2:617096‑M2/104‑1 (MQ=255)
                                                                                                     aaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTAAACGTGAAACCGGCACCGGAAGTGCGTGCGTTCTGGGGCTGGAGGAAGGAGCTGGaa                                         >  1:126262‑M2/40‑143 (MQ=255)
                                                                                                     aaaaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTATTTCGATTGTCTGGCTGTATGCGTCAACGGGAAACCAGCACCGGAAGTGCGCTAATTCTCgggctgcagaatggaacgggcg                                         >  1:1036303‑M2/40‑136 (MQ=255)
                                                                                                       aaatttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAgc                                       <  2:1069136‑M2/106‑1 (MQ=255)
                                                                                                         atttaccgcactaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAgcgc                                     <  2:1164270‑M2/108‑1 (MQ=255)
                                                                                                          tttaccgcactcggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTGTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCa                                    <  1:385085‑M2/109‑1 (MQ=255)
                                                                                                          gttaccgtactgcgcccgtatactcgggaaggcaAGGGCAAAGATAATCGATTCCTTTTCGATTGTCTGGCTGTATGCGTCATCGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCa                                    <  2:919034‑M2/109‑1 (MQ=255)
                                                                                                          gttaccgcacgaggcccgtatagtcgtgaaggtaAGTGCAAAGATAATCGATTCTGTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCa                                    <  2:540864‑M2/109‑1 (MQ=255)
                                                                                                                 cgcgaggcccgtatattcgtgcaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATcc                             <  2:289972‑M2/116‑1 (MQ=255)
                                                                                                                  cctaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGAAACATTTTCGATTGTCCGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATccc                            <  2:216455‑M2/117‑1 (MQ=255)
                                                                                                                  actaggcccgtatattcgtgaaggtaAGTGCAAAGAGAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATccc                            <  2:1032373‑M2/117‑1 (MQ=255)
                                                                                                                   ctaggcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCg                           <  2:603133‑M2/118‑1 (MQ=255)
                                                                                                                       gcccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGtttt                       <  1:724083‑M2/122‑1 (MQ=255)
                                                                                                                        gccgtcttctcgtGAAGGTCAGTGGAGAGATAATCAGTAGTTTATTTTTTGTCTGGCTGTGTGCGTCGACGGGAAACCGGCACCGGAAGTGCGTGAATTCGGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTa                      <  1:1002695/131‑1 (MQ=255)
                                                                                                                         ccgtatattcgtgaaggtaAGTGCAAAGCTAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTAc                     <  1:1000035‑M2/124‑1 (MQ=255)
                                                                                                                         ccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTTTTTTTTTTTTCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAGTTCTGGGGCTGGGGGTTGGAGCTGGAAGCGCAGGAATCGCGTTTtat                     >  1:260624‑M2/20‑142 (MQ=255)
                                                                                                                         ccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTAc                     <  2:933260‑M2/124‑1 (MQ=255)
                                                                                                                         ccgtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATGCTGGGGCTGGTGGATAGAGCTGAGAGCGCAGGAATACCGATTTAc                     >  1:655385‑M2/20‑143 (MQ=255)
                                                                                                                           gtatattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGCTGTGCGTGAATTCTGGTGCTTGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCt                   >  2:101721‑M2/18‑143 (MQ=255)
                                                                                                                              tattcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAGACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACa                <  1:157835‑M2/129‑1 (MQ=255)
                                                                                                                                ttcgtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGAGAAAAATGCTCGGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGt              >  2:732989‑M2/13‑143 (MQ=255)
                                                                                                                                   gtgaaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTAc           <  2:554011‑M2/134‑1 (MQ=255)
                                                                                                                                      aaggtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTATTCCCTACAGTTAGCAg        >  1:426988‑M2/7‑143 (MQ=255)
                                                                                                                                         gtaAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGGAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGttt     >  2:378729‑M2/4‑143 (MQ=255)
                                                                                                                                         gTAAGTGCAAAGATAATCGATTCTGTTTCGCGTGTCTGGCTGTATGTGTCAACGTGAAACCGGTGGAGGGAGCTCGCAAACCCTAATTACCATCGGGGGAGCGGGATGCGCAGGAATCCCGTTTTACCTACAGTTACCAGttt     <  2:853967/143‑1 (MQ=255)
                                                                                                                                          taAGTGCAAAGATAATCGATGCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTg    <  2:965440‑M2/141‑1 (MQ=255)
                                                                                                                                            aGTGCAAAGATTATCGGTTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGACGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGt  <  1:1131049/143‑1 (MQ=255)
                                                                                                                                            aGTGCAAAGATAATCCATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGt  <  2:1055586/143‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                              
CCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTGAAGGTAAGTGCAAAGATAATCGATTCTTTTTCGATTGTCTGGCTGTATGCGTCAACGTGAAACCGGCACCGGAAGTGCGTGAATTCTGGGGCTGGTGGATGGAGCTGGAAGCGCAGGAATCCCGTTTTACCTACAGTTACCAGTTTGGT  >  NC_000913/258544‑258826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.