| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2224019 | 66 (0.980) | 3 (0.050) | 3/282 | 10.4 | 4.7% | coding (850/933 nt) | pbpG | D‑alanyl‑D‑alanine endopeptidase |
| ? | NC_000913 | 2742802 = | 56 (0.840) | coding (422/1227 nt) | yfiN | putative membrane‑anchored diguanylate cyclase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTACGTGATAAGCAGCAAAATATTCTGGCATCCTGGCATTACACCCGTAAGGATCCAGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTATTCTGCTGGCATCAGGCATCGCAATTACCCTCACCCGCCATTTGCACAATGGCCTGGTAGAAGCG > NC_000913/2742660‑2742944 | ggccGTGATAAGGAGCAAAATATTCTGGCATCCTGGCATTACACCCGTAAGGATCCAGGCGATACTGTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTgg < 1:861931/140‑1 (MQ=255)gTACGTGATAAGCAGCAAAATATTCTGGCATCCTGGCATTACACCCGTAAGGATCCAGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTgg > 2:186911/1‑143 (MQ=255)gTACGTGATAAGCAGCAAAATATTCTGGCATCCTGGCATTACACCCGTAAGGATCCAGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTgg > 1:526840/1‑143 (MQ=255) cGTGATAAGCAGCGAGATATTCTGGCATCCTGGCATTACACCCGTACGGATCCAGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCC‑CCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGaa < 1:944364/143‑1 (MQ=255) cGTGATAAGCAGCAAAATATTCTGGCATCCTGGCATTACACCCGTAAGGATCCAGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGa > 2:1077276/1‑143 (MQ=255) ggagcaggAGAATATTCTGGCATCCTGGCATTACACCCGTAAGGATCCAGGCGATACTTTCAGTAATTTCATAAGTCACTGGCTCTTCCCTGCCCCCATCTTTCCATTAACTTTCTACAATAGTGAATCCATTGTCGAAGTAc < 1:834850/141‑1 (MQ=255) aaGCAGCAAAATATTCTGGCATCCTGGCATTACACCCGTAAGGATCCAGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGCAACCATTGGCGAAGTACg > 1:140509/1‑143 (MQ=255) agcagcAAAATATTCTGGCATCCTGGCATTACACCCGTAAGGATCCAGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGc < 2:343140/143‑1 (MQ=255) agcagcAAAAGATTCTGGCATCCTAGCATTACACCCGTAAGGATCCCGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGc < 2:825752/143‑1 (MQ=255) gcaAAATATTCTGGCATCCTGGCATTACACCCGTACGGATCCAGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTCCCCCCATCATTCACCCCATTCGTCCCAATGGTGCAACCATTCGCGCAGCACGCTTaa > 1:275029/1‑143 (MQ=255) gcaAAATATTCTGGCATCCTGGCATTACACCCGTAAGGATCCAGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTaa < 2:682154/143‑1 (MQ=255) gcaAAATATTCTGGCAGTCTGGCATTACACCCGTAAGGATCCAGGCGCTACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTaa < 1:671160/143‑1 (MQ=255) caAAATATTCTGGCATCCTGGCATTACACCCGTAAGGATCCAGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGCAGTACGCTTAAc > 2:190787/1‑143 (MQ=255) aaaaTACTCTGGCATCCTGGCATTACACCCGTAAGGATCCAGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAAcc < 2:100427/143‑1 (MQ=255) tatTCTGGCATCCTGGCATTACACCCGTAAGGATCCAGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCta > 2:4567/1‑142 (MQ=255) ttCTGGCATCCTGGCATTACACCCGTAACCCTCCAGGCGATACTTTCAGTAATTTCATAAGCAACAAACAAAACACTACCCCAATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCAcgc > 2:7591/1‑143 (MQ=255) cTGGCATCCTGGCATTACACCCGTAAGGATCCAGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCACCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCTCGCGa < 2:165441/143‑1 (MQ=255) aTCCTGGCATTACACCCGTAAGGATCCAGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCTCGCGGCAGtt > 1:592034/1‑143 (MQ=255) aTCCTGGCATTACACCCGTAAGGATCCAGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCACTGGAGCAGTACGTTTAACCGcactcagcagtt > 1:326196/1‑132 (MQ=255) aTCCCGGCATTACACCCGTAAGGATCCAGGCGATACCTTCAGTAATTTCATACGCCACTGGCTTTTCCCTGCCCCCATCATTCACCCGATTCGTCAAAATGGTGAAACCATTAGCGAATTACACTTAAAAGCTAGCGACAgca > 2:526145/1‑141 (MQ=255) tGGCATTACACCCGTAAGGATCCAGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGATCGCGACAATTCAAt > 1:620378/1‑143 (MQ=255) acCCGTAAGGATCCAGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGAAAGGGTCAGTTCAATCAGCCAttt > 1:282109/1‑143 (MQ=255) ggATCCAGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGt < 2:344967/143‑1 (MQ=255) tCCAGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATCTTACCTGGtttt > 1:395504/1‑143 (MQ=255) cAGGCGATGCTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTtcg < 1:670920/143‑1 (MQ=255) cAGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTtcg < 2:526840/143‑1 (MQ=255) aGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTtcgc < 1:227040/143‑1 (MQ=255) aTACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATNCAGCCGATTCGTCACAATGGTGAAACCCTTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGcc < 2:698357/143‑1 (MQ=255) tttCCGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTAc < 2:886391/143‑1 (MQ=255) ttccAGTAATTTCCTAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTAc < 1:658005/140‑1 (MQ=255) gTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATATTATCAAGTTTTAGCTCGCAGTACTGaac > 2:353561/1‑141 (MQ=255) tCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGt > 1:1078718/1‑143 (MQ=255) tAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTAtt > 2:890844/1‑143 (MQ=255) tAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCTCGCGACAGCTCAATCAGCCATTTTATCTGGTTTTCGCCCGCCGTACTCACCGGTTGTAtt > 1:1052087/1‑143 (MQ=255) aGCCACGGGCGCTGCCCGGCCCCCATCATTCAGGCGATTCGTCACTATTGTGAAACCATTGGCGAAGTACGCTGAACCGCGCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTATTct < 1:502689/143‑1 (MQ=255) aCTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGCAGTACGCTTAACCGCTCGCGACCGTTCAATCAGCCATTTTATCTGGGTTTCGCTCGCCGTACTGCCCGGTTGTATTcggctg > 2:638733/1‑143 (MQ=255) cTGCCCCCATCATTCAGCCGATTCGTTACAATGGTGAAATCATTGGCTAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTATTCTGCTGGCATCAGGCATc < 1:7591/143‑1 (MQ=255) cTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTATTCTGCTGGCATCAGGCATc > 1:219842/1‑143 (MQ=255) cTGCCCCCATCATGCAGTCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTATTCTGCTGGCATCAGGCATc < 1:679441/143‑1 (MQ=255) tcccccccTCATTCACCCGACTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCATCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTATTCTGCTGGCATCAGGCATCg < 2:287944/141‑1 (MQ=255) ccATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCTTGCGACAGTTCCATCTGCCCTTTTATCTGGTTTTCGCTCCCTGTACTGACCGGTTGTCTTCTGCTGGCATCAGCCCTCGccctc > 2:772214/1‑139 (MQ=255) tcatTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTATTCTGCTGGCATCAGGCATCGCAATTAcc < 1:746624/143‑1 (MQ=255) ccttCGGCGGATTCGTCACAGTGGTGAACCCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTGTCGCTCGCCGTACTGACCGGTTGTATTCTGCTGGCATCAGGCATCGCAATTAccc < 1:363280/141‑1 (MQ=255) atTCAGCGGATTCGTCACAATTGTGAAACCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTCTCTCGTTTTCGCTCGCCGTACTGACCGGTTGTATTCTGCTGGCATCAGGCATCGCAATTACCCt < 2:906594/143‑1 (MQ=255) acccttggtcttCGTCACAACGGTGAAACCATTGGCGAAGTACGCTTAACCGCCCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTATTCTGCCGGCATCAGGCATCGCAATTACCCt < 2:896271/133‑1 (MQ=255) tCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTATTCTGCTGGCATCAGGCATCGCAATTACCCTCa < 2:282109/143‑1 (MQ=255) gCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTATTCTGCTGGCATCAGGCATCGCAATTACCCTCAccc > 2:893205/1‑143 (MQ=255) gtCGTCAGTATGCGGAAACCATTGGCGAAGGTCTCTGAACCGCGCGCGACAGTTCAATCGGCCATGTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTATGCTGCTGGCATCAGGCATCGCAATTACCCTCACCCGCCAt < 1:30140/142‑1 (MQ=255) tGACACCATTGGCGACGTACGCCTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTATTCTGCTGGCATCAGGCATCGCAATTACCCTCACCCGCCATTTGCACAATGGcc < 2:240273/143‑1 (MQ=255) aaaCCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTATTCTGCTGGCATCAGGCATCGCAATTACCCTCACCCGCCATTTGCACAATGGCCTg < 2:1078718/143‑1 (MQ=255) aaaCCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTATTCTGCTGGCATCAGGCATCGCAATTACCCTCACCCGCCATTTGCACAATGGCCTg < 2:1113021/143‑1 (MQ=255) aaaCCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTATTCTGCTGGCATCAGGCATCGCAATTACCCTCACCCGCCATTTGCACAATGGCCTg > 2:1074003/1‑143 (MQ=255) aCCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTATTCTGCTGGCATCAGGCATCGCAATTACCCTCACCCGCCATTTGCACAATGGCCTGGt < 2:711333/143‑1 (MQ=255) ccATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTATTCTGCTGGCATCAGGCATCGCAATTACCCTCACCCGCCATTTGCACAATGGCCTGGTa > 2:611569/1‑143 (MQ=255) cATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTATTCTGCTGGAACCTGCAAGCGCTTTTACCCTCACCCGCCGTTTGCACAATGGCCTGGTAg > 1:1003240/1‑143 (MQ=255) atgggCGAAGTACGCTTAGCCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTATTCTGCTGGCATCAGGCATCGCAATTACCCTCACCCGCCATTTGCACAATGGCCTGGTAGa < 1:1044095/140‑1 (MQ=255) ttGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTATTCTGCTGGCATCAGGCATCGCAATTACCCTCACCCGCCATTTGCACAATGGCCTGGTAGac > 2:1064333/1‑142 (MQ=255) ggCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTGGTATTCTGCTGGCATCAGGCATCGCAATTACCCTCACCCGCCATTTGCACAGTGGGCTGGTAGAAgc > 2:353942/1‑143 (MQ=255) ggCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTGTTCGCTCGCCGTACACACCGGGTGTATTCTGCTGGCATCAGGCATCGCAATTACCCTCACCCGCCATTTGCACAATGGCCTGGTAGGAgc > 2:165841/1‑143 (MQ=255) gCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTATTCTGCTGGCATCAGGCATCGCAATTACCCTCACCCGCCATTTGCACAATGGCCTGGTAGAAgcg > 2:641964/1‑143 (MQ=255) | GTACGTGATAAGCAGCAAAATATTCTGGCATCCTGGCATTACACCCGTAAGGATCCAGGCGATACTTTCAGTAATTTCATAAGCCACTGGCTCTTCCCTGCCCCCATCATTCAGCCGATTCGTCACAATGGTGAAACCATTGGCGAAGTACGCTTAACCGCTCGCGACAGTTCAATCAGCCATTTTATCTGGTTTTCGCTCGCCGTACTGACCGGTTGTATTCTGCTGGCATCAGGCATCGCAATTACCCTCACCCGCCATTTGCACAATGGCCTGGTAGAAGCG > NC_000913/2742660‑2742944 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |