Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 2,413,482 IS5 (–) +4 bp coding (13‑16/1203 nt) ackA → acetate kinase A and propionate kinase 2

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288919 =NA (NA)35 (0.960) 29/260 0.4 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 = 2413485 0 (0.000)coding (16/1203 nt) ackA acetate kinase A and propionate kinase 2
* ? NC_000913 = 2290113NA (NA)31 (0.850) 26/260 0.6 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 2413482 = 0 (0.000)coding (13/1203 nt) ackA acetate kinase A and propionate kinase 2

AGATATTTCTTCCATCATGCAAAAAAAATTTGCAGTGCATGATGTTAATCATAAATGTCGGTGTCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAATGTTTCCACCTGCCCGAAGCACGTATCAAATGGAAAATGGAC  >  NC_000913/2413340‑2413616
                                                                                                                                                 |                                                                                                                                   
aagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTAc                                                                                                                                  >  2:17734‑M2/143‑149 (MQ=255)
 agaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACt                                                                                                                                 >  1:12190‑M2/142‑149 (MQ=255)
  atatTTCTTCCATCATGCAAAAAAAATTTGCAGTGCATGATGTTAATCATAAATGTCGGTGTCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaag                                                                                                                                <  2:135474‑M2/149‑6 (MQ=255)
   aaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTa                                                                                                                                   <  2:155125‑M2/6‑1 (MQ=255)
   aaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTa                                                                                                                                   >  1:155125‑M2/140‑145 (MQ=255)
       tcttcCATCATGCAAAAAAAATTTGCAGTGCATGATGTTAATCATAAATGTCGGTGTCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgc                                                                                                                            <  1:85586‑M2/148‑10 (MQ=255)
        ctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCt                                                                                                                           >  1:160324‑M2/135‑148 (MQ=255)
                  gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTgg                                                                                                                               >  7:3827‑M2/125‑134 (MQ=255)
                  gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGt                                                                                                                 <  8:104359‑M2/24‑1 (MQ=255)
                    aaaaaaaaTTTGCAGTGCATGATGTTAATCATAAATGTCGGTGTCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcgggga                                                                                                               <  1:183720‑M2/148‑23 (MQ=255)
                       aaaaaTTTGCAGTGCATGATGTTAATCATAAATGTCGGTGTCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaatt                                                                                                           >  4:55447‑M2/1‑123 (MQ=255)
                            gcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACt                                                                                                      <  2:160324‑M2/35‑1 (MQ=255)
                                    ctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTg                                                                                              >  7:60957‑M2/107‑149 (MQ=255)
                                    ctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTg                                                                                              >  2:78995‑M2/107‑149 (MQ=255)
                                     cATGATGTTAATCATAAATGTCGGTGTCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgact                                                                                             >  3:45214‑M2/1‑109 (MQ=255)
                                     cATGATGTTAATCATAAATGTCGGTGTCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgact                                                                                             >  3:47363‑M2/1‑109 (MQ=255)
                                             tAATCATAAATGTCGGTGTCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatt                                                                                     <  3:126707‑M2/149‑49 (MQ=255)
                                              aaTCATAAATGTCGGTGTCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattt                                                                                    <  6:128403‑M2/149‑50 (MQ=255)
                                                     aaTGTCGGTGTCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttc                                                                              >  5:128403‑M2/1‑93 (MQ=255)
                                                         tCGGTGTCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaatatgcggggatattcttctcggctgactcagtcatttcatttcttcat                                                                         >  2:85586‑M2/1‑89 (MQ=255)
                                                            agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGt                                                                       >  4:57192‑M2/83‑148 (MQ=255)
                                                             tgtCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagc                                                                                                                    <  2:165584‑M2/102‑18 (MQ=255)
                                                              gtCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgc                                                                                                                            <  2:171293‑M2/93‑10 (MQ=255)
                                                              gtCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgc                                                                                                                            >  1:171293‑M2/1‑84 (MQ=255)
                                                                    atGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccga                                                              <  6:150235‑M2/149‑72 (MQ=255)
                                                                            cGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgctaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct                                                      >  6:70026‑M2/1‑70 (MQ=255)
                                                                             gCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc                                                     >  2:183720‑M2/1‑69 (MQ=255)
                                                                                ccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTa                                                  <  3:57192‑M2/87‑1 (MQ=255)
                                                                                 tATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctccc                                                   >  1:135474‑M2/1‑65 (MQ=255)
                                                                                 tATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttcacggctgactcagtcatttcatttcttcatgtttgagccgattttttctccc                                                   >  4:59343‑M2/1‑65 (MQ=255)
                                                                                 cctgttctattgctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGc                                                                                             >  3:39077‑M2/62‑105 (MQ=255)
                                                                                 cctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGc                                                                                             <  4:39077‑M2/44‑1 (MQ=255)
                                                                                  ctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCa                                                                                                        <  2:71548‑M2/33‑1 (MQ=255)
                                                                                        tatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGaa                                            <  2:136271‑M2/93‑1 (MQ=255)
                                                                                        tatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGaa                                            >  1:136271‑M2/55‑147 (MQ=255)
                                                                                          tggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAATGtt                                        <  8:60957‑M2/97‑1 (MQ=255)
                                                                                            gctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAATGTTTc                                      <  1:78995‑M2/99‑1 (MQ=255)
                                                                                             ctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAATGTTTc                                      >  4:46575‑M2/50‑148 (MQ=255)
                                                                                              cGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttt                                                          <  1:120698‑M2/127‑76 (MQ=255)
                                                                                              cGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttt                                                          >  2:120698‑M2/1‑52 (MQ=255)
                                                                                               gTTTTTTTAGCCACGTATCAATTATAGGTACTTCAATGTCGAGTAAGATAGggaaggtgcgaataagcgttgaaattcttctcg                                                                                                    <  2:99490‑M2/84‑34 (MQ=255)
                                                                                               gTTTTTTTAGCCAAGTAGCAATTATAGGTAGTTCCATGTCGATTAAGTTATggaaggtgcgaataagcggggaaattcttctcg                                                                                                    >  1:99490‑M2/1‑51 (MQ=255)
                                                                                                 agatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAATGTTTCCACCt                                 >  4:38162‑M2/46‑149 (MQ=255)
                                                                                                          cACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttag                        >  4:126707‑M2/1‑40 (MQ=255)
                                                                                                           aCGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttaga                       <  5:4536‑M2/149‑111 (MQ=255)
                                                                                                            atgatctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAATGTTTCCACCTGCCCGAAGCAc                      <  3:46575‑M2/115‑1 (MQ=255)
                                                                                                               atctcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAATGTTTCCACCTGCCCGAAGCACGTa                   >  5:64183‑M2/32‑149 (MQ=255)
                                                                                                               aTCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct                                         >  8:57956‑M2/1‑35 (MQ=255)
                                                                                                               aTCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct                                         <  7:57956‑M2/127‑93 (MQ=255)
                                                                                                               aTCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat                                             >  6:51080‑M2/1‑35 (MQ=255)
                                                                                                               aTCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat                                             <  5:51080‑M2/123‑89 (MQ=255)
                                                                                                               aTCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt                                                                            >  6:136168‑M2/1‑35 (MQ=255)
                                                                                                               aTCAATTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt                                                                            <  5:136168‑M2/92‑58 (MQ=255)
                                                                                                                  tcatatcagggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTACCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAATGTTTCCACCTGCCCGAAGCACGTATc                 >  5:94607‑M2/29‑148 (MQ=255)
                                                                                                                   aTTATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttct               <  4:130303‑M2/149‑119 (MQ=255)
                                                                                                                    ttATAGGTACTTCCATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttctt              >  3:130303‑M2/1‑30 (MQ=255)
                                                                                                                         agggacttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAATGTTTCCACCTGCCCGAAGCACGTATCaaatgga          <  3:38162‑M2/127‑1 (MQ=255)
                                                                                                                               ttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAAt                                           <  2:141230‑M2/94‑1 (MQ=255)
                                                                                                                               ttgttcgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAAt                                           >  1:141230‑M2/16‑109 (MQ=255)
                                                                                                                                ccATGTCGAGTAAGTTAGggaaggtgcgaataagcggggaaatacttctcggctgactaagtcatttcaattcttcatgtttgagcccattttttctcccgtaaatgccatgaataagcctatttagcccgtatcttcgacatttaagg  <  8:7731‑M2/149‑132 (MQ=255)
                                                                                                                                    cgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAAttt                                                                                               >  2:191173‑M2/11‑52 (MQ=255)
                                                                                                                                    cgcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAAttt                                                                                               <  1:191173‑M2/42‑1 (MQ=255)
                                                                                                                                     gcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTgg                                                      >  2:18650‑M2/10‑92 (MQ=255)
                                                                                                                                     gcaccttccTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTgg                                                      <  1:18650‑M2/83‑1 (MQ=255)
                                                                                                                                             gTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccacttaag   >  4:29185‑M2/1‑5 (MQ=255)
                                                                                                                                             gTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccacttaag   <  3:29185‑M2/135‑131 (MQ=255)
                                                                                                                                              ttAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATg                                                                                  >  4:118823/1‑55 (MQ=255)
                                                                                                                                              ttAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATg                                                                                  <  3:118823/55‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                   
AGATATTTCTTCCATCATGCAAAAAAAATTTGCAGTGCATGATGTTAATCATAAATGTCGGTGTCATCATGCGCTACGCTCTATGGCTCCCTGACGTTTTTTTAGCCACGTATCAATTATAGGTACTTCCATGTCGAGTAAGTTAGTACTGGTTCTGAACTGCGGTAGTTCTTCACTGAAATTTGCCATCATCGATGCAGTAAATGGTGAAGAGTACCTTTCTGGTTTAGCCGAATGTTTCCACCTGCCCGAAGCACGTATCAAATGGAAAATGGAC  >  NC_000913/2413340‑2413616

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.