New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	781369 =	96 (0.980)	25 (0.260) +G	13/284	8.3	28.5%	noncoding (1/76 nt)	lysZ	tRNA‑Lys
	?	NC_000913	= 2521128	30 (0.310)					intergenic (+2/‑45)	valX/valY	tRNA‑Val/tRNA‑Val
Rejected: Coverage evenness skew score above cutoff.

ATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTT  >  NC_000913/2520996‑2521269                                                                                                                                     |                                                                                                                                              atcaCCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGATCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCCGATCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAAt                                                                                                                               >  7:271966/1‑149 (MQ=255)   cacccaccAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTGTCTCGCCCGCTAAAttt                                                                                                                             >  7:142833/1‑149 (MQ=255)    acccaccAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGAACCCGTCATCACCCACCACTTTCTCGCCAGCTAAAttt                                                                                                                             <  8:64653/148‑1 (MQ=255)        accaACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCTGCTAAAATTATTg                                                                                                                         >  3:387039/1‑148 (MQ=255)              aactTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAAt                                                                                                                  <  5:136076/148‑1 (MQ=255)                ctTTCTGTAGTCTCCGCCGGGTCGAAAGAAATTGAGTAGTGGGGGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGGTCGCTCCCGTCATCCCCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAAtgt                                                                                                                <  8:142833/149‑1 (MQ=21)                                                       tGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTGGGCGCGAGATATATGTGGTGTTAAAATGTGAAGTACAGACGTGGGGGATTAGGTGCGCTGGGAgcgcg                                                                         >  6:138233/1‑148 (MQ=14)                                                                aGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGAt                                                                                            >  6:366444/1‑121 (MQ=255)                                                                aGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGAt                                                                                            <  5:366444/121‑1 (MQ=255)                                                                 gCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAg                                                                                                            >  2:183452/1‑104 (MQ=255)                                                                 gCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAg                                                                                                            <  1:183452/104‑1 (MQ=255)                                                                   tCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTATTGTAAAAATGTGAAGTACAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTAc                                                               >  4:194464/1‑147 (MQ=255)                                                                       cTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTtct                                                                                                                                           >  5:125848/1‑67 (MQ=35)                                                                       cTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTtct                                                                                                                                           <  6:125848/67‑1 (MQ=35)                                                                                  ccTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTg                                                                                                  <  2:21216/97‑1 (MQ=255)                                                                                  ccTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTg                                                                                                  >  1:21216/1‑97 (MQ=255)                                                                                   cTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCAcc                                                                       <  5:194844/123‑1 (MQ=255)                                                                                   cTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCAcc                                                                       >  6:194844/1‑123 (MQ=255)                                                                                   cTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGt                                             >  2:9083/1‑149 (MQ=255)                                                                                        ttACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGTAGGGGGTCGGCGGTTCGAt                                        >  3:187282/1‑149 (MQ=255)                                                                                                      tCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATcaccca                          >  7:58466/1‑149 (MQ=255)                                                                                                        ggcggTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATcacccac                         >  2:4839/1‑148 (MQ=255)                                                                                                                 aTCCCGTCATCACCCACCACTTTCTCGCGAGATAAATTTTTTGTAAAAATGTGAATTAAAAAAGTGTGTTATTAGGTAAGATGGCTGAGCACCTCCCTTAAAAAGAAGCGCTCGGGGTTTCCATACAGTGATCACCCACCACGTAggg                >  8:141056/1‑148 (MQ=255)                                                                                                                 aTCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGt               >  4:188389/1‑149 (MQ=255)                                                                                                                    ccGTCATCACCCACCACTTTCTCTCCATCTAAATTTGTTGAAAAAATTTGAAGTAAAGAATAGTGTGATTAGCTCAGCTAGAAGAGCAGCTCCCTTACAAGGAGGGGGTATGCTGTTGAATCCCGTCATCACCCACGACTTATGGTca             >  8:113586/1‑147 (MQ=255)                                                                                                                     cGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTAACGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGTGGGTCGGCGGTTCGATCCCGTCATAACCCACCACTACGGCTCGt            >  1:183914/1‑148 (MQ=21)                                                                                                                          tcaCCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCt       >  7:209999/1‑148 (MQ=255)                                                                                                                            acccaccACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGAGCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAg    >  7:142509/1‑149 (MQ=255)                                                                                                                              ccaccaCTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGtt  >  4:315919/1‑149 (MQ=255)                                                                                                                              ccaccaCTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGtt  >  1:213039/1‑149 (MQ=255)                                                                                                                                     |                                                                                                                                              ATCACCCACCAACTACTTTATGTAGTCTCCGCCGTGTAGCAAGAAATTGAGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTTCTCGCCAGCTAAATTTCTTGTAAAAATGTGAAGTACCGAAGTGGGTGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGATCCCGTCATCACCCACCACTTCGGGTCGTTAGCTCAGTT  >  NC_000913/2520996‑2521269

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.