| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,469,009 | G→T | 100% | V266F (GTT→TTT) | gtrB → | CPS‑53 (KpLE1) prophage; bactoprenol glucosyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,469,009 | 0 | G | T | 99.2% | 466.6 / ‑3.8 | 129 | coding (796/921 nt) | gtrB | CPS‑53 (KpLE1) prophage; bactoprenol glucosyl transferase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base T (75/53); minor base . (0/1); total (75/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.19e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
| Rejected as polymorphism: Polymorphic indel expands or contracts a homopolymer stretch. | |||||||||||
Only 100 of 131 total aligned reads displayed.
TACAAGCTTTTCCACATTCCCTCTTCGCATCTGGACATACATAGGGTTAGTGGTAGCCAGTGTAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTGTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTAT > NC_000913/2468867‑2469152 | tACAAGCTTTTCCACATTCCCTCTTCGCATCTGGACATACATAGGGTTAGTGGTAGCCAGTGTAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTc > 3:8735/1‑147 (MQ=255) cAAGCTTTTCCACATTCCCTCTTCGCATCTGGACATACATAGGGTTAGTGGTAGCCAGTGTAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTtttt < 1:236434/143‑1 (MQ=255) ttCGCATCTGGACATACATAGGGTTAGTGGTAGCCAGTGTAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAAtt > 5:371455/1‑146 (MQ=255) ttCGCATCTGGACATACATAGGGTTAGTGGTAGCCAGTGTAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAAtt > 5:51394/1‑146 (MQ=255) cTGGACATACATAGGGTTAGTGGTAGCCAGTGTAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTTGAATTGAGATGAtt > 3:307002/1‑148 (MQ=255) cTGGACATACATAGGGTTAGTGGTAGCCAGTGTAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGAtt > 4:238998/1‑148 (MQ=255) tGGACATACATAGGGTTAGTGGTAGCCAGTGTAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTg > 1:170432/1‑148 (MQ=255) catacataGGGTTAGTGGTAGCCAGTGTAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAAt < 1:169928/148‑1 (MQ=255) taGGGTTAGTGGTAGCCAGTGTAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGt < 4:8735/148‑1 (MQ=255) gggTTAGTGGTAGCCAGTGTAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTa < 3:157536/147‑1 (MQ=255) gggTTAGTGGTAGCCAGTGTAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTAt > 7:131021/1‑148 (MQ=255) gggTTAGTGGTAGCCAGTGTAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTAt < 6:371455/148‑1 (MQ=255) ggTTAGTGGTAGCCAGTGTAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGttttt > 2:283252/1‑115 (MQ=255) ttAGTGGTAGCCAGTGTAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAg < 2:145986/148‑1 (MQ=255) cAGTGTAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATAtt < 3:149294/148‑1 (MQ=255) gtgtAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTgg < 3:238998/148‑1 (MQ=255) gtAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTAtt < 1:219106/131‑1 (MQ=255) gtAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTAtt > 2:219106/1‑131 (MQ=255) gtAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGAc > 2:158770/1‑148 (MQ=255) gtAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGAc > 2:92572/1‑148 (MQ=255) gtAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGAc > 5:202987/1‑148 (MQ=255) gtAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGAc > 2:264026/1‑148 (MQ=255) aGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAAt < 6:123943/105‑1 (MQ=255) aGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGATTAGGAGTATTAGGTGAATATATTGGACg > 2:157536/1‑147 (MQ=255) aGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAatat > 8:121095/1‑139 (MQ=255) aGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAatat < 7:121095/139‑1 (MQ=255) aGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAAGAGGAGTAATAGGTGAATATATTGGACg > 6:331884/1‑147 (MQ=255) cATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGcac < 4:352625/148‑1 (MQ=255) atttatttATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGcac < 2:175474/147‑1 (MQ=255) tttatttaTGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGcaca > 4:244581/1‑147 (MQ=255) tttatttaTGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGAAGcacc > 4:144139/1‑146 (MQ=255) ttatttatGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCacata > 6:139805/1‑148 (MQ=255) ttatttatGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCacata > 5:28969/1‑148 (MQ=255) ttatttatGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCacata > 5:170966/1‑148 (MQ=255) tatttatGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTa < 2:21276/91‑1 (MQ=255) tatttatGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTa > 1:21276/1‑91 (MQ=255) tatttatGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCacata < 1:264026/147‑1 (MQ=255) tatttatGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCacata > 8:251305/1‑147 (MQ=255) atttatGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCacatac < 6:202987/147‑1 (MQ=255) tttatGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCacataca < 1:158770/147‑1 (MQ=255) tGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGaa < 3:159602/148‑1 (MQ=255) ggggCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGaaa > 3:231326/1‑148 (MQ=255) gggCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGaaa < 2:170432/147‑1 (MQ=255) gCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTGAGGGGATATCCTTCACTACTTTTTTCACTACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAAcc > 2:374556/1‑147 (MQ=255) tGGATGATTTTAGATACTATCAAATTTGGAAATGCTGTTAGGTGAGATCATTCATTACTTTTTTCATTACTGTTTTTAGTTGGAATTAAGATGATTGGAATAGTAGTATTATGTGAATATATTGTACGCacataca < 2:247760/136‑1 (MQ=255) ggATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGTTATATCCTTCAGTACTTTTTTAAATAATGTTTTTAGGTTGAATTCAGATGATTGGAATAGCAGTATTAGGTGAATATATTGGACGCaaatacat > 1:247760/1‑136 (MQ=255) ggATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGca > 2:235381/1‑129 (MQ=255) ggATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCacat < 4:88212/132‑1 (MQ=255) ggATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCacat > 3:88212/1‑132 (MQ=255) ggATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCaaaa > 6:39403/1‑147 (MQ=255) ggATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCaaaa > 8:398322/1‑147 (MQ=255) ggATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCaaaa > 1:363931/1‑147 (MQ=255) ggATGAGTTTAGATACTATCATTTTTGGAAATGCTGTTAGGGGAGATCCTTGACTACTTTTTTCAATACTGGTGTTAGGTGGAAGTCTGATGATTGGAATAg > 2:268453/1‑102 (MQ=255) gatgatTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTAtt < 1:384823/108‑1 (MQ=255) gatgatTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCaaaaa < 4:231326/147‑1 (MQ=255) gatgatTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCaaaaa < 3:345386/147‑1 (MQ=255) gatgatTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCaaaaa < 6:28969/147‑1 (MQ=255) gatgatTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCaaaaa < 2:363931/147‑1 (MQ=255) tgatTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTTGGTGAATATATTGGACGCACATACATTGAAACCAAAATACg > 1:312000/1‑148 (MQ=255) atTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGc < 3:236282/147‑1 (MQ=255) tttAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTg < 6:229110/131‑1 (MQ=255) tttAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTg > 5:229110/1‑131 (MQ=255) tACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATa > 5:318857/1‑147 (MQ=255) aTCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATATTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATAcatc > 6:253239/1‑147 (MQ=255) aTCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCaaaaa < 1:11698/131‑1 (MQ=255) aTCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCaaaa < 1:228116/130‑1 (MQ=255) aTCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCaaaa > 2:228116/1‑130 (MQ=255) aTCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATAcatca > 5:224975/1‑148 (MQ=255) aTCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATAcatca > 7:265140/1‑148 (MQ=255) atatTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACatcatc < 6:318857/147‑1 (MQ=255) atTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGcac < 2:90551/108‑1 (MQ=255) atTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGcac > 1:90551/1‑108 (MQ=255) atTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGaaa > 5:115793/1‑119 (MQ=255) atTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACatcatc > 7:198405/1‑145 (MQ=255) tttGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAag < 5:39403/147‑1 (MQ=255) tttGGAAATGCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAag < 5:139805/147‑1 (MQ=255) gCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCaaaaa < 8:145635/116‑1 (MQ=255) gCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCaaaaa > 7:145635/1‑116 (MQ=255) gCTGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCaaa > 3:329028/1‑147 (MQ=255) tGTTAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCaaaaaa > 4:223511/1‑148 (MQ=255) tacgggtATATCATACAATACTT‑TTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATg < 6:374281/144‑1 (MQ=255) tAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAAt > 5:307051/1‑122 (MQ=255) tAGGGGATATCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAAt < 6:307051/122‑1 (MQ=255) tatCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGa > 4:288196/1‑141 (MQ=255) tatCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGa < 3:288196/141‑1 (MQ=255) atCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAga > 5:320358/1‑146 (MQ=255) tCCTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCaa < 7:398322/148‑1 (MQ=255) ccTTCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCaa > 8:132124/1‑147 (MQ=255) tCACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATaa > 8:141816/1‑147 (MQ=255) cACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATAca < 4:218664/111‑1 (MQ=255) cACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATaaa < 1:92572/147‑1 (MQ=255) cACTACTTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATaa > 6:68346/1‑146 (MQ=255) tactTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCaaaaaa > 2:291716/1‑128 (MQ=255) tactTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCaaaaaa < 1:291716/128‑1 (MQ=255) tactTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTa > 6:133725/1‑148 (MQ=255) tactTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTa > 7:211219/1‑148 (MQ=255) actTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCaa < 1:85695/114‑1 (MQ=255) actTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCaa > 2:85695/1‑114 (MQ=255) actTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGAAATAAAAGTa > 7:52406/1‑147 (MQ=255) ctTTTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTAt > 8:290515/1‑147 (MQ=255) | TACAAGCTTTTCCACATTCCCTCTTCGCATCTGGACATACATAGGGTTAGTGGTAGCCAGTGTAGCATTTATTTATGGGGCGTGGATGATTTTAGATACTATCATATTTGGAAATGCTGTTAGGGGATATCCTTCACTACTTGTTTCAATACTGTTTTTAGGTGGAATTCAGATGATTGGAATAGGAGTATTAGGTGAATATATTGGACGCACATACATTGAAACCAAAAAACGCCCGAAATACATCATCAAGAGAGTCAAAAAATGAATAAAGCAATAAAAGTAT > NC_000913/2468867‑2469152 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |