| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 168,474 | C→T | 79.3% | Q331* (CAG→TAG) | fhuA → | ferrichrome outer membrane transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 168,474 | 0 | C | T | 79.3% | 217.2 / 52.8 | 107 | Q331* (CAG→TAG) | fhuA | ferrichrome outer membrane transporter |
| Reads supporting (aligned to +/- strand): ref base C (11/11); new base T (51/33); total (63/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 107 total aligned reads displayed.
GGAACCGTTGAGCCGCTGCCGAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTC > NC_000913/168333‑168620 | ggAACCGTTGAGCCGCTGCCGAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCt > 5:87264/1‑149 (MQ=255) ccGTTGAGCCGCTGCCGAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTgcgc < 2:434126/149‑1 (MQ=255) ccGCTGCCGAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTCATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGa < 1:29384/149‑1 (MQ=255) ccGAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGaaaacaa < 2:426256/149‑1 (MQ=255) cGAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGaaaacaa > 1:326517/1‑148 (MQ=255) gAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGaaaacaaaa > 5:343876/1‑149 (MQ=255) ggTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTc < 6:87264/149‑1 (MQ=255) aGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCa > 5:255731/1‑148 (MQ=255) gTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACCCCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCaaaa > 3:237256/1‑148 (MQ=255) ccGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGt > 5:31501/1‑149 (MQ=255) aCAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGATAAGATGGTCGGCTACAGCGTCGCTCACGAATTTAACGACCCCTTTAATGTTCGTTAGAACATGAGCTTTGCTTAACACAAAACCTCGCAAAACAGAGTGTa > 8:307247/1‑149 (MQ=255) aCAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTa < 3:94614/149‑1 (MQ=255) aGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATg > 1:170944/1‑149 (MQ=255) aCTTTAATGAAGGGGCGAAGCCCCACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACCGCGTTTGTGGt > 2:171501/1‑149 (MQ=255) tttAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAACCAAAACCTCGCAAAACAGCGTTTATGGTTa > 8:247787/1‑149 (MQ=255) tttAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTa > 4:153636/1‑149 (MQ=255) tAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATGACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACg > 6:394319/1‑149 (MQ=255) tAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACg > 5:160423/1‑149 (MQ=255) tAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACg > 1:402835/1‑149 (MQ=255) aaTGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACg < 6:255731/148‑1 (MQ=255) aaTGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACg < 1:45531/148‑1 (MQ=255) gAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCCTTTATGGTTACGGCGt > 2:250872/1‑149 (MQ=255) aGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCt > 2:415596/1‑149 (MQ=255) gggCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGc > 3:296438/1‑149 (MQ=255) gCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTc > 3:102994/1‑149 (MQ=255) gaagaaCAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTcc > 7:79926/1‑148 (MQ=255) aagaaCAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGa < 4:296438/149‑1 (MQ=255) aagaaCAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGa > 2:240224/1‑149 (MQ=255) agaaCAACACCTATTCTCGTAATGAGAAGATGGTCGTAGACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGAt < 6:343876/149‑1 (MQ=255) aacaCCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGc > 7:93322/1‑149 (MQ=255) aacaCCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGc < 3:153636/149‑1 (MQ=255) cacCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAACCTGCGCTTTGCTGaaaacaaaa < 8:137169/101‑1 (MQ=255) cacCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAACCTGCGCTTTGCTGaaaacaaaa > 7:137169/1‑101 (MQ=255) cacCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGc > 5:108200/1‑115 (MQ=255) cacCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGc < 6:108200/115‑1 (MQ=255) acCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACgg > 2:207768/1‑128 (MQ=255) acCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACgg < 1:207768/128‑1 (MQ=255) ccTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAAt > 5:15623/1‑149 (MQ=255) cTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATg > 3:27707/1‑149 (MQ=255) cTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATg > 6:20696/1‑149 (MQ=255) cTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATg < 6:31501/149‑1 (MQ=255) ttCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCt < 2:326517/148‑1 (MQ=255) tctcGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTa > 1:84271/1‑149 (MQ=255) tctcGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTa > 6:60552/1‑149 (MQ=255) tcGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTa > 7:304751/1‑147 (MQ=255) tcGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAAAAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCAGGCGAATGATTACa > 7:232452/1‑149 (MQ=255) gTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTAc < 4:370159/146‑1 (MQ=255) gTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTAc < 6:15623/146‑1 (MQ=255) gTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACa < 4:27707/147‑1 (MQ=255) tAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGc > 3:44477/1‑148 (MQ=255) aTGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCaaa < 5:60552/149‑1 (MQ=255) agaagaTGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAg > 3:373749/1‑149 (MQ=255) agaagaTGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACa < 1:61466/148‑1 (MQ=255) agaTGGTCGGCTACATCTTCGATCACGAATATAACGAGACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAgtgt < 8:232452/149‑1 (MQ=255) tCGGCTACAGCTTCGTTCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTCCGGCGTCTGCTCCGAACCGGCGAATGCTTACAGCAAACAGTGTGCGGCa > 8:417775/1‑149 (MQ=255) tCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCa < 2:402835/149‑1 (MQ=255) tCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTGAGAACCTGCGCTTTGCTGAAAACAAACCCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATGCGGCGAATGCTTACCGCAAACAGTGTGCGGCa > 8:411954/1‑149 (MQ=255) ggCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCAt < 8:304751/148‑1 (MQ=255) ggCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAACCTGCGCTTTGCTGAACACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCAtt < 4:102994/149‑1 (MQ=255) tACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAgc > 3:25712/1‑149 (MQ=255) aCAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAgcg > 8:294470/1‑149 (MQ=255) cTTCTATCACGAATTTACCGACACCTTTACTGTGCGTTAGAACCTTCGCTTTGCTGAAAACAAAACCACGCAAAACAGCGTGTATGTTTTCGGCGCATGCTCCGATCCGGCGAATTCTTACAGCAAACAGTGTGCGGCATGAGCGCCAg < 7:307247/149‑1 (MQ=255) ttCGATCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGc > 2:194903/1‑149 (MQ=255) aTCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGa > 3:257315/1‑148 (MQ=255) tCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGt > 4:304244/1‑90 (MQ=255) tCACGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGt < 3:304244/90‑1 (MQ=255) cACGAATTTAACGACACCTTTAATGTGCGTCAGAACCTGCGCTTTGCTGAAAACAAACCCTCGCAAAACCGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCAt > 2:215713/1‑133 (MQ=255) aCGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCg > 1:39916/1‑143 (MQ=255) aCGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCg < 2:39916/143‑1 (MQ=255) aCGAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCAGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATa > 4:191517/1‑147 (MQ=255) aCGAATTTAACGACACCTTTACTGTGCGTCAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACa > 4:110797/1‑121 (MQ=255) aCGAATTTAACGACACCTTTACTGTGCGTCAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACa < 3:110797/121‑1 (MQ=255) gAATTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAgg < 1:240224/149‑1 (MQ=255) gAAATTAACGCCACCTTTACTGTGCTTTAGAACCTGCGCTTTGCTGACAACAAAACCTCGAAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGTCGAATGCTTACAGCAAACAGTGTGAGGCATTAGCGCCAGCGGATaaatg > 5:70143/1‑147 (MQ=255) aaTTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGc < 4:257315/149‑1 (MQ=255) aTTTAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAACCCACGCAAAACAGCGTTTATGGTTAAGGCGTCTGCTCCGATCCGGCGAATGCTTACAGAAAACAGTGTGCGGCATTAGCGCGAGCGGATAAAGGc > 6:97533/1‑148 (MQ=255) tttAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCa < 1:194903/149‑1 (MQ=255) tttAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCa < 5:394319/149‑1 (MQ=255) ttAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAACGGCCAt > 1:84829/1‑149 (MQ=255) tAACGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCAt > 1:335111/1‑148 (MQ=255) cGACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATgg < 3:1227/69‑1 (MQ=255) cGACACCTTTACTGAGACTTAGAACCTGCGCTTTTCTGAAAACAAAACCTCGCAAAACAGCGATAATgg > 4:1227/1‑69 (MQ=255) gACACCTTTACTGTGCGTTAGAACCTGCGCTTTGCAGAAAACAAAACCTCGCAACACAGCGTGTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCt < 6:70143/149‑1 (MQ=255) cacCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTgg < 3:247357/149‑1 (MQ=255) acCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTgg > 3:196783/1‑148 (MQ=255) acCTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGAGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTTTGCg > 1:219418/1‑114 (MQ=255) acCTTTACTGTGAGTTAGAACCTGAGCTTTGATGAAAACAAAACCTCGCAAAACAGCTTTTATGGTTACGGCGTCTGCTCCGTTCCTGCGAATGCTTACAGCAAACAGTGTTCg < 2:219418/114‑1 (MQ=255) cTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGc > 8:70073/1‑87 (MQ=255) cTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGc < 7:70073/87‑1 (MQ=255) cTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAg < 6:67447/99‑1 (MQ=255) cTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGc > 8:146788/1‑147 (MQ=255) cTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGc < 7:146788/147‑1 (MQ=255) cTTTACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCAc > 8:276631/1‑149 (MQ=255) tttACTGTGCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACg > 3:163507/1‑149 (MQ=255) tACTGTGCGTCAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCa < 2:210496/135‑1 (MQ=255) tACTGTGCGTCAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCa > 1:210496/1‑135 (MQ=255) tgtgCGTTAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTaaa > 7:267191/1‑148 (MQ=255) tgtgCGTCAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTg < 3:261499/139‑1 (MQ=255) tgtgCGTCAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTg > 4:261499/1‑139 (MQ=255) gTCAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATAcgtc > 4:101569/1‑149 (MQ=255) | GGAACCGTTGAGCCGCTGCCGAACGGTAAGCGTCTGCCGACAGACTTTAATGAAGGGGCGAAGAACAACACCTATTCTCGTAATGAGAAGATGGTCGGCTACAGCTTCGATCACGAATTTAACGACACCTTTACTGTGCGTCAGAACCTGCGCTTTGCTGAAAACAAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTC > NC_000913/168333‑168620 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |