Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 168,640 IS2 (+) +5 bp coding (1157‑1161/2244 nt) fhuA → ferrichrome outer membrane transporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 168640 =0 (0.000)33 (1.140) 30/252 0.1 100% coding (1157/2244 nt) fhuA ferrichrome outer membrane transporter
?NC_000913 1467910 = NA (NA)noncoding (1331/1331 nt) IS2 repeat region
* ? NC_000913 = 1686440 (0.000)32 (1.120) 30/250 0.1 100% coding (1161/2244 nt) fhuA ferrichrome outer membrane transporter
?NC_000913 = 1469240 NA (NA)noncoding (1/1331 nt) IS2 repeat region

AAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCAACGCCTGGTTTGGTTACGACGACTCTGTGCCACTGCTCAATC  >  NC_000913/168498‑168786
                                                                                                                                                  |                                                                                                                                              
aaaacCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAAc                                                                                                                                                >  8:48/1‑147 (MQ=255)
    ccTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagact                                                                                                                                          <  7:48‑M1/149‑7 (MQ=255)
      tCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactgg                                                                                                                                        >  6:36681‑M1/1‑141 (MQ=255)
       cGCAAAACAGCGTTTATGGTTACGGAGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggc                                                                                                                                       >  7:110067‑M1/1‑140 (MQ=255)
           gcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATa                                                                                                                                   <  4:74684‑M1/18‑1 (MQ=255)
                   tttATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCTAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctc                                                                                                                           <  7:73269‑M1/149‑22 (MQ=255)
                      ttataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTg                                                                                                                           <  2:100009‑M1/26‑1 (MQ=255)
                         taacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGAt                                                                                                                                    >  6:107667‑M1/118‑134 (MQ=255)
                         taacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGAt                                                                                                                                    <  5:107667‑M1/17‑1 (MQ=255)
                          aacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGc                                                                                                                     <  4:27979‑M1/32‑1 (MQ=255)
                                 ggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCa                                                                                                                         >  1:75532‑M1/110‑137 (MQ=255)
                                 ggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCa                                                                                                                         <  2:75532‑M1/28‑1 (MQ=255)
                                  gcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGc                                                                                                             >  2:141891‑M1/109‑148 (MQ=255)
                                  gcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGc                                                                                                             >  2:143927‑M1/109‑148 (MQ=255)
                                     tccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGc                                                                                                             <  4:7762‑M1/40‑1 (MQ=255)
                                     tccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGc                                                                                                             >  3:7762‑M1/106‑145 (MQ=255)
                                       cgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTg                                                                                                        >  3:74684‑M1/104‑148 (MQ=255)
                                                  ctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGAc                                                                                             <  5:30330‑M1/56‑1 (MQ=255)
                                                        ttACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtctt                                                                                       >  1:76922‑M1/1‑91 (MQ=255)
                                                             ctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCg                                                                                                     >  6:28656‑M1/82‑129 (MQ=255)
                                                             ctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCg                                                                                                     <  5:28656‑M1/48‑1 (MQ=255)
                                                              tcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGa                                                                                <  4:6451‑M1/69‑1 (MQ=255)
                                                              cAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatac                                                                                  >  3:122386‑M1/1‑85 (MQ=255)
                                                                 ccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCg                                                                             >  3:6451‑M1/78‑149 (MQ=255)
                                                                  cacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCgg                                                                            <  4:40127‑M1/73‑1 (MQ=255)
                                                                      ggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTc                                                                        >  6:30330‑M1/73‑149 (MQ=255)
                                                                       tgCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttag                                                                        <  2:76922‑M1/148‑73 (MQ=255)
                                                                         atatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGAc                                                                     >  1:68605‑M1/70‑149 (MQ=255)
                                                                          tatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACt                                                                    >  1:100009‑M1/69‑149 (MQ=255)
                                                                             aTTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagt                                                                  >  2:128586‑M1/1‑70 (MQ=255)
                                                                                aggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaACAACTGCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTtatgc                                                              >  7:119561‑M1/63‑149 (MQ=255)
                                                                                 gcgcCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg                                                             <  5:36681‑M1/149‑84 (MQ=255)
                                                                                        cGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaaca                                                      <  1:128586‑M1/149‑91 (MQ=255)
                                                                                          gATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacaga                                                    <  4:122386‑M1/149‑93 (MQ=255)
                                                                                            tAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGATGCAAAACtagactggacacctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagat                                                   >  3:54508‑M1/1‑55 (MQ=255)
                                                                                                  ccATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgat                                            >  3:91247‑M1/1‑49 (MQ=255)
                                                                                                  ccATTATCTGGCAAGTAAATACGTTGTTGATGATGAGAAGCTGCAAAACtagacttgccgcctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgat                                            <  4:54508‑M1/149‑101 (MQ=255)
                                                                                                    gttaagtgataacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCAAc                                          >  3:40127‑M1/43‑149 (MQ=255)
                                                                                                        tCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagtctggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtctt                                       <  8:110067‑M1/148‑106 (MQ=255)
                                                                                                           ggCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttaggg                                   >  8:12001‑M1/1‑40 (MQ=255)
                                                                                                            gCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggc                                  >  2:155113‑M1/1‑39 (MQ=255)
                                                                                                              aacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAAt                                                   >  8:105759‑M1/33‑130 (MQ=255)
                                                                                                              aacagatgtctggaaatataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAAt                                                   <  7:105759‑M1/98‑1 (MQ=255)
                                                                                                                 tAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccgga                              <  2:76872‑M1/148‑115 (MQ=255)
                                                                                                                 tAAATACGTCGTTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccg                                >  1:76872‑M1/1‑34 (MQ=255)
                                                                                                                        gtcgtTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacg                        >  7:118428‑M1/1‑27 (MQ=255)
                                                                                                                           gtTGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcaga                    <  7:12001‑M1/148‑125 (MQ=255)
                                                                                                                            ttGATGATGAGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttt                                                                          <  8:104585‑M1/93‑71 (MQ=255)
                                                                                                                             atataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTta                                                                 >  4:88976‑M1/18‑101 (MQ=255)
                                                                                                                             atataggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTta                                                                 <  3:88976‑M1/84‑1 (MQ=255)
                                                                                                                              gatgatgaGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggc                >  7:109012‑M1/1‑21 (MQ=255)
                                                                                                                              gatgatgaGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggc                >  7:30130‑M1/1‑21 (MQ=255)
                                                                                                                               atgatgaGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggc                <  8:118428‑M1/148‑129 (MQ=255)
                                                                                                                                 gatgaGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagttttaagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgta             >  5:130628‑M1/1‑18 (MQ=255)
                                                                                                                                  ggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAAt                                                   >  1:41685‑M1/13‑110 (MQ=255)
                                                                                                                                  ggggcaaatccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAAt                                                   <  2:41685‑M1/98‑1 (MQ=255)
                                                                                                                                  atgaGAAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgta             <  4:91247‑M1/148‑132 (MQ=255)
                                                                                                                                    gagaAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtacca          >  1:47809‑M1/1‑15 (MQ=255)
                                                                                                                                      gaAGCTGCAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccaca        >  1:92042‑M1/1‑13 (MQ=255)
                                                                                                                                           ccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCAACGCCtggt                                   <  8:105166‑M1/114‑1 (MQ=255)
                                                                                                                                           ccaAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCAACGCCtggt                                   >  7:105166‑M1/4‑117 (MQ=255)
                                                                                                                                            caAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCAACGCCTGGTTTGGTTACGACGACTCTGTGCCACTGCt       >  7:39242‑M1/3‑144 (MQ=255)
                                                                                                                                            caAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCAACGCCTGGTTTGGTTACGACGACTCTGTGCCACTGCt       <  8:39242‑M1/142‑1 (MQ=255)
                                                                                                                                             cAAAACtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaa  <  8:30130‑M1/148‑143 (MQ=255)
                                                                                                                                              aaaaCtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaa  >  6:21688‑M1/1‑5 (MQ=255)
                                                                                                                                                  ctagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaa  >  8:101774‑M1/1‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                              
AAAACCTCGCAAAACAGCGTTTATGGTTACGGCGTCTGCTCCGATCCGGCGAATGCTTACAGCAAACAGTGTGCGGCATTAGCGCCAGCGGATAAAGGCCATTATCTGGCACGTAAATACGTCGTTGATGATGAGAAGCTGCAAAACTTCTCCGTTGATACCCAGTTGCAGAGCAAGTTTGCCACTGGCGATATCGACCACACCCTGCTGACCGGTGTCGACTTTATGCGTATGCGTAATGACATCAACGCCTGGTTTGGTTACGACGACTCTGTGCCACTGCTCAATC  >  NC_000913/168498‑168786

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.