| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3235543 = | 28 (0.900) | 4 (0.140) | 4/252 | 3.5 | 13.0% | coding (333/1137 nt) | rlmG | 23S rRNA m(2)G1835 methyltransferase, SAM‑dependent |
| ? | NC_000913 | 3235583 = | 27 (0.920) | coding (293/1137 nt) | rlmG | 23S rRNA m(2)G1835 methyltransferase, SAM‑dependent | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GAGCACTTTTTCGAACAGTTCCAGCGTGGAAGTGTGAATGTCACGGGCCTTGGCACCGGCAATAATACGTGTATCCGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATTCTCGCGCGTCGCCAGTTCACTGATGTATGAGTCGCCAATGCTGTACGGCTTA > NC_000913/3235399‑3235681 | gAGCACTTTTTCGAACAGTTCCAGCGTGGAAGTGTGAATGTCAC‑GGCCTTGGCACCGGCAATAATACGTGTATCCGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATc < 4:37431/144‑1 (MQ=255)gAGCACTTTTTCGAACAGTTCCAGCGTGGAAGTGTGAATGTCAC‑GGCCTTGGCACCGGCAATAATACGTGTATCCGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATc > 3:37431/1‑144 (MQ=255) ccAGCGTGGAAGTGTGAATGTCACGGGCCTTGGCACCGGCAATAATACGTGTATCCGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGtt > 1:103391/1‑144 (MQ=255) ccAGCGTGGAAGTGTGAATGTCACGGGCCTTGGCACCGGCAATAATACGTGTATCCGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGtt < 2:103391/144‑1 (MQ=255) aaTGTCACGGGCCTTGGCACCGGCAATAATACGTGTATCCGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACAcc > 7:98945/1‑120 (MQ=255) aaTGTCACGGGCCTTGGCACCGGCAATAATACGTGTATCCGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACAcc < 8:98945/120‑1 (MQ=255) cGGCAATAGTACGTGTATCCGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGAc > 1:62652/1‑149 (MQ=255) ggCAATAATACGTGTATCCGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCgg < 2:28910/111‑1 (MQ=255) ggCAATAATACGTGTATCCGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCgg > 1:28910/1‑111 (MQ=255) gtgtATCCGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAAc > 6:13039/1‑125 (MQ=255) gtgtATCCGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAAc < 5:13039/125‑1 (MQ=255) gtATCCGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGtt > 2:27613/1‑149 (MQ=255) gtATCCGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGtt > 5:119748/1‑149 (MQ=255) tCCGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAg < 7:32394/149‑1 (MQ=255) cGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATc > 3:3274/1‑139 (MQ=255) cGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATc < 4:3274/139‑1 (MQ=255) cGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGc > 7:99479/1‑149 (MQ=255) gACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCTGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATccc < 1:26432/135‑1 (MQ=255) gACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCTGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATccc > 2:26432/1‑135 (MQ=255) aCTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATtctc < 1:27613/149‑1 (MQ=255) aCTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATtctc < 8:99479/149‑1 (MQ=255) cTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATTCTcg > 3:82040/1‑149 (MQ=255) gcagcgcaCGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGTGGCGTAAATTCTCGCGCGTc < 2:62652/149‑1 (MQ=255) gCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATTCTCGCGCGGCGCCAGTTCACTGAt < 4:82040/148‑1 (MQ=255) cAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCga > 7:77504/1‑65 (MQ=255) cAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCga < 8:77504/65‑1 (MQ=255) cAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACtcat > 2:39648/1‑86 (MQ=255) gCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATTCTCGCGCGTCGCCAGTTCACTGATGTATGAGTCGCCAATGCTGTACGGCTTa < 6:119748/149‑1 (MQ=255) | GAGCACTTTTTCGAACAGTTCCAGCGTGGAAGTGTGAATGTCACGGGCCTTGGCACCGGCAATAATACGTGTATCCGACGTGACCACTTTGCGCAGCGCACGCAGTTGCTGTTCCAGCAATGCCAGTGTTTTCGGCACTTTGATCAGCACCACACCCGGCTGTTGCGGGTAGTCGGCGGTGCTGTCGAGAAACTTCACGCTCGACTCATCAATCCCGTTGAGGCGTAAATTCTCGCGCGTCGCCAGTTCACTGATGTATGAGTCGCCAATGCTGTACGGCTTA > NC_000913/3235399‑3235681 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |