New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2304839	29 (0.320)	9 (0.100) +C	5/282	11.2	23.8%	noncoding (423/655 nt)	REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences	REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences
	?	NC_000913	= 2305105	NA (NA)					intergenic (+712/+3)	eco/mqo	ecotin, a serine protease inhibitor/malate dehydrogenase, FAD/NAD(P)‑binding domain
Rejected: Coverage evenness skew score above cutoff.

CCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGC  >  NC_000913/2304691‑2304942                                                                                                                                                     |                                                                                                        ccGTTTGCCTGACGCGACGCTGGCGCGTCTTATCATGCCTACACCGCTGTGAAGTGCCCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAg                                                                                                         <  2:332575/149‑1 (MQ=255)  cGGTTGCCCGATGCGCCGCTGGCGCGTCTTAGCATCCCTACACCCCTTTGACGAGCTCCACCCCCTCTGTCTGACAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAgg                                                                                                        <  6:87884/149‑1 (MQ=11)    gTTGCCTGTTTCCATGCTGGCGGGTCTTATGAGGTCTACACCGCTGTGAAGTGCTGCACCCCGTAGGTTTGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGcc                                                                                                      <  6:28460/149‑1 (MQ=14)    gTTGCCTCTTTCGATTCTGGAGTGTCTTATGATGTCTACACCGCTGTTATGTGCGGGACCCCGTAGGTTTGATAAGGCGGTTACGCCGCATCCTACATCCAACGTCCGTGACGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGcc                                                                                                      <  6:28462/149‑1 (MQ=11)           gaggCGACGCTGGCGCGGCTTATCAGGCCTACACCGCTGTGAAGTGCGGCACCCCGTAGGTGGGATAAGGCGGGTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCg                                                                                               <  5:323373/146‑1 (MQ=11)                  ctcTGGCTCGTATTATCAGTCCTTCACCGCTGAGAAGTGCCCCACCCCTTATGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGaa                                                                                        <  2:307409/147‑1 (MQ=14)                  cgattgcgcGTCTTATCAGGCCTACACGTCTGTGAAGTGCTCTACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGaa                                                                                        <  4:178816/144‑1 (MQ=255)                        cgcgTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGAAGGATAAGGCGGTTACGCCGCATCCGACATCAAACGACCGAGCCGGTTGCCTGATGCGACGCTGGCGCGCCGAATCTGGCCGTCACCGCTAACAAGTGCTc                                                                                  >  2:343008/1‑149 (MQ=11)                                   aGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGcc                                                                                                      <  8:293193/118‑1 (MQ=255)                                   aGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGcc                                                                                                      >  7:293193/1‑118 (MQ=255)                                                            cACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGGCAGCGAACGTACGAGAAGGTTGCCTGATGAGACGGTGGAGCGTCTTGTCAGGCCTACAGAGCTGTGAAGTGCTCCACCCCGTAGGTGGGATAAGGCGGTTAcgcgggcgg                                              >  2:30916/1‑143 (MQ=11)                                                            cACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTAATATCAGGCCTACACCACTGTGAAGTGCTACCCCCAGTAGTTCGGATAAGGCGGTTACGCCGCATc                                              >  2:93024/1‑149 (MQ=14)                                                               cccGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGGTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGa                                           <  2:75855/149‑1 (MQ=255)                                                                  gTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGa                                                                  >  6:225440/1‑123 (MQ=255)                                                                  gTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGa                                                                  <  5:225440/123‑1 (MQ=255)                                                                       ttGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAAc                                   >  2:131600/1‑149 (MQ=39)                                                                              aGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCg                                                                                               >  2:174260/1‑82 (MQ=38)                                                                                gCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACCCCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCCTCCGCAAGCTAACGCCCAAGcc                          >  1:226260/1‑149 (MQ=11)                                                                                            actCCGCCCTCCAACGTCCGAGCCGGTTGCCTGATGCTACGATTCCTCTTCTTATCAGGCCTACACCGATGAGAATTGCTCACCCCCGTAGGTCGGATCAGGCGGTTACGACGAATCCGACATCTAACGCCCAAGCCGGTTGCCTGATg              <  4:227479/147‑1 (MQ=11)                                                                                              tCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACCCCGCTGTGATGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCGACGCCGGTTGCCGGCTGct            >  3:227479/1‑148 (MQ=11)                                                                                                 gACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCCGGCGTACACCGCGGGGAATTGCGCCCCCGCGTAGGTGGGATAAGGCGGTTACGCCGCATCCGACATCTAAAGACCCAGCCGGTTGCCTGATGCGACg         >  1:100092/1‑149 (MQ=11)                                                                                                 gACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACg         >  4:261579/1‑149 (MQ=32)                                                                                                 gACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCAATCCACCCATCAGACGTGCTAACCCCCGTCGGTCGGATAAGGCGGTTACGCAGCATCCGAGATCAGACTCCCTAGCCGTATGCCTGATGCGACg         >  2:352008/1‑149 (MQ=2)                                                                                                     tCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCT‑‑‑CCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTACCGCCCACGCCGGTAGACTGATGCGACGCTGgcgc  >  5:234208/1‑149 (MQ=11)                                                                                                       cAACGTCCGCGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGgc    <  1:93024/148‑1 (MQ=17)                                                                                                       cAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCgg                                                          <  7:167763/94‑1 (MQ=33)                                                                                                       cAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCgg                                                          >  8:167763/1‑94 (MQ=33)                                                                                                       cAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGgcg   >  6:129885/1‑149 (MQ=32)                                                                                                        aaCGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCCCCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGgcgc  >  3:322720/1‑149 (MQ=17)                                                                                                        aaCGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATAAGGCCTACCCCGCTGGGCAGTGCTCCGCCCCGTAGGTCGGATACGGCGGGGACGCCGCCGCCGACATCTAACGCCCCAGCCGGTTGCCTGATGCGACGCTGgcgc  >  5:350402/1‑149 (MQ=11)                                                                                                                                                     |                                                                                                        CCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCGACATCCAACGTCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTCGGATAAGGCGGTTACGCCGCATCCGACATCTAACGCCCAAGCCGGTTGCCTGATGCGACGCTGGCGC  >  NC_000913/2304691‑2304942

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.