Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 973,271 IS5 (+) +4 bp 40.3% coding (128‑131/780 nt) elyC ← envelope biogenesis factor; DUF218 superfamily protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 273955 =NA (NA)24 (0.350) 20/254 NT 38.6% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 973271 = 37 (0.550)coding (131/780 nt) elyC envelope biogenesis factor; DUF218 superfamily protein
* ? NC_000913 = 275149NA (NA)26 (0.380) 24/254 NT 40.5% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 973274 37 (0.550)coding (128/780 nt) elyC envelope biogenesis factor; DUF218 superfamily protein

CCAGGTATAACCACCTCCGAGCACCACGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTAAAAAGCATCCTTTCTGGTTCCTTTTTTA  >  NC_000913/973129‑973421
                                                                                                                                                 |                                                                                                                                                   
ccAGGTATAACCACCTCCGAGCACCACGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCtaat                                                                                                                                                    >  6:240558/1‑147 (MQ=255)
   ggTATAACCACCTCCGAGCACCACGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATaaa                                                                                                                                                 >  1:244383/1‑147 (MQ=255)
     tataACCACCTCCGAGCACCACGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATaaaaa                                                                                                                                               >  2:180842/1‑147 (MQ=255)
      ataACCACCTCCGAGCACCACGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATc                                                                                                                                             >  1:284544/1‑148 (MQ=255)
         accaccTCCGAGCACCACGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcg                                                                                                                                           >  8:82155‑M2/1‑137 (MQ=255)
          ccaccTCCGAGCACCACGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaa                                                                                                                                         >  1:278898‑M2/1‑136 (MQ=255)
                 cGAGCACCACGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGtttt                                                                                                                                  <  2:284544/148‑1 (MQ=255)
                    gCACCACGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATACGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAAAAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGtttttt                                                                                                                                >  3:91916/1‑147 (MQ=255)
                         acGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatat                                                                                                                           <  2:104589‑M2/147‑27 (MQ=255)
                         acGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAAc                                                                                                                          >  6:104762/1‑148 (MQ=255)
                         acGATATACTCCACTTTTTGCTAATTATTCCATGTCGGATAGGAGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAAAGTTCCCGGTATTTTGAAAAc                                                                                                                          >  8:286277/1‑148 (MQ=255)
                           gATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACgg                                                                                                                        <  5:240558/148‑1 (MQ=255)
                           aacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACgg                                                                                                                        >  5:54282‑M2/116‑148 (MQ=255)
                                 gTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTaaa                                                                                                                   <  8:145101/147‑1 (MQ=255)
                                   ccACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtt                                                                                                                <  7:187199‑M2/148‑38 (MQ=255)
                                   ccACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACca                                                                                                                >  1:44482/1‑148 (MQ=255)
                                   aaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGaaa                                                                                                                            >  3:84127‑M2/108‑136 (MQ=255)
                                   aaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGaaa                                                                                                                            <  4:84127‑M2/29‑1 (MQ=255)
                                   aaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACca                                                                                                                >  2:263894‑M2/108‑148 (MQ=255)
                                   aaataggctgattcaaggcatttaagggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagcccagaagaatttccccgcttattagaaccttccCTAATAAAACTCTTCACGGTTTTTTGAAAAAGGCTAAACca                                                                                                                >  6:39181‑M2/108‑148 (MQ=255)
                                    aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAAc                                                                                                                  <  6:54282‑M2/39‑1 (MQ=255)
                                    aataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACca                                                                                                                <  7:228645‑M2/41‑1 (MQ=255)
                                     ataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACcaca                                                                                                              <  1:263894‑M2/43‑1 (MQ=255)
                                     aCTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACcaca                                                                                                              <  2:44482/148‑1 (MQ=255)
                                       tttttGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgt                                                                                                             <  1:305031‑M2/147‑41 (MQ=255)
                                           tGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc                                                                                                         >  2:305031‑M2/1‑103 (MQ=255)
                                               aaTTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggag                                                                                                    >  2:177309‑M2/1‑99 (MQ=255)
                                                  tattCCATGTCGGATAGGTTCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCgccaggc                                                                                                  >  3:62061/1‑147 (MQ=255)
                                                  aggcatttacgggagaaaatatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCgccaggcc                                                                                                 <  8:302529‑M2/56‑1 (MQ=255)
                                                  aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGttttt                                                                                                                                 <  1:131157‑M2/24‑1 (MQ=255)
                                                  aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGttttt                                                                                                                                 >  2:131157‑M2/93‑116 (MQ=255)
                                                     tCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtca                                                                                                           <  5:39760‑M2/135‑43 (MQ=255)
                                                     tCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtca                                                                                                           >  6:39760‑M2/1‑93 (MQ=255)
                                                      ccATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatag                                                                                              >  1:244368‑M2/1‑92 (MQ=255)
                                                      ccATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatag                                                                                              >  2:163427‑M2/1‑92 (MQ=255)
                                                         tGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCa                                                                                          <  3:98343/148‑1 (MQ=255)
                                                                gaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATca                                                                                   <  2:288304‑M2/70‑1 (MQ=255)
                                                                 aGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg                                                                                                      >  5:176149‑M2/1‑81 (MQ=255)
                                                                 aGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg                                                                                                      <  6:176149‑M2/128‑48 (MQ=255)
                                                                 aGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATca                                                                                   <  4:91916/147‑1 (MQ=255)
                                                                 aGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATcaa                                                                                  >  6:286024/1‑148 (MQ=255)
                                                                  ggTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAAAAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATcaa                                                                                  <  4:35205/147‑1 (MQ=255)
                                                                     gCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatg                                                                              >  2:315092‑M2/1‑77 (MQ=255)
                                                                     gCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcat                                                                               <  8:224206‑M2/147‑71 (MQ=255)
                                                                      atcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAacaaca                                                                             >  7:190160‑M2/73‑148 (MQ=255)
                                                                              gggACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCgg                                                                      >  5:7953/1‑147 (MQ=255)
                                                                              aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGa                                                                     <  8:190160‑M2/84‑1 (MQ=255)
                                                                               ggACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATCAACAACATCAGCGGa                                                                     <  1:180842/147‑1 (MQ=255)
                                                                               ggACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATCAACAACATCAGCGGa                                                                     <  4:62061/147‑1 (MQ=255)
                                                                               ggACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGa                                                                     <  5:286024/147‑1 (MQ=255)
                                                                               ggACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGa                                                                     <  6:7953/147‑1 (MQ=255)
                                                                               aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCgg                                                                      >  7:11862‑M2/64‑146 (MQ=255)
                                                                                    gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTgg                                                                >  4:145359‑M2/59‑147 (MQ=255)
                                                                                    gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTgg                                                                >  4:140572‑M2/59‑147 (MQ=255)
                                                                                     agcagGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacct                                                              >  2:74215‑M2/1‑61 (MQ=255)
                                                                                        agGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatctacttaccttcg                                                           >  7:224206‑M2/1‑58 (MQ=255)
                                                                                        aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGgcagc                                                            >  1:64944‑M2/55‑147 (MQ=255)
                                                                                          atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAAc                                                         <  2:64944‑M2/96‑1 (MQ=255)
                                                                                             gTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGa                                                                     >  4:253876/1‑133 (MQ=255)
                                                                                             gTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGa                                                                     <  3:253876/133‑1 (MQ=255)
                                                                                             gTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACata                                                      >  5:163633/1‑148 (MQ=255)
                                                                                               cGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacag                                                    <  4:131003‑M2/148‑98 (MQ=255)
                                                                                                ggCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTg                                                   <  2:244383/148‑1 (MQ=255)
                                                                                                     ccGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatt                                              >  8:48623‑M2/1‑45 (MQ=255)
                                                                                                     ccGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatt                                              >  8:187199‑M2/1‑45 (MQ=255)
                                                                                                      cGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt                                                             <  1:143405‑M2/132‑89 (MQ=255)
                                                                                                      cGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttacctt                                                             >  2:143405‑M2/1‑44 (MQ=255)
                                                                                                         ttGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatttagc                                          >  1:104589‑M2/1‑41 (MQ=255)
                                                                                                            ccgagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCacttat                                       >  2:121181‑M2/35‑146 (MQ=255)
                                                                                                             aaaCTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagt                                       <  5:249915‑M2/147‑111 (MQ=255)
                                                                                                              gagaagaatttccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACtttttt                                     >  1:212028‑M2/33‑148 (MQ=255)
                                                                                                              aaCTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACtttttt                                     >  2:9042/1‑148 (MQ=255)
                                                                                                               aCTCAATAACAAGAGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaag                                    <  2:54080‑M2/148‑114 (MQ=255)
                                                                                                               aCTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACtttttt                                     >  2:40453/1‑147 (MQ=255)
                                                                                                                   aaTAACAAGAGCTCCAGACACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATCAAGAACTTCTGCGGTAGTGGCAGCAACATATTGCCTATCACTTTTTTCAgt                                 <  8:83806/147‑1 (MQ=255)
                                                                                                                    aTAACAAGCGCGCCAGCCACCCAATGCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcctcgggagccatagaccaggggtcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtacgcgccg                               <  4:98722‑M2/148‑119 (MQ=255)
                                                                                                                     tAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAgtgt                               >  7:306366/1‑147 (MQ=255)
                                                                                                                      aaCAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCgcc                                                                                                      <  7:82025/75‑1 (MQ=255)
                                                                                                                      aaCAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCgcc                                                                                                      >  8:82025/1‑75 (MQ=255)
                                                                                                                       aCAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTaa                             <  1:17181/147‑1 (MQ=255)
                                                                                                                         ccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCTCAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTaaaa                           <  3:140572‑M2/126‑1 (MQ=255)
                                                                                                                         ccccgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTaaaa                           <  3:145359‑M2/126‑1 (MQ=255)
                                                                                                                            cgcttattcgcaccttccCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTACACCACAGCAGATCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGACAATCACTTTTTTCAGTGTAAAAAGCa                       <  5:39181‑M2/130‑1 (MQ=255)
                                                                                                                             gcgcCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTAAAAAGCAt                      <  1:9042/148‑1 (MQ=255)
                                                                                                                                  agccaCCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTAAAAAGCATCCttt                 <  5:104762/148‑1 (MQ=255)
                                                                                                                                   gccaCCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTAAAAAGCATCCTTTc                <  6:163633/148‑1 (MQ=255)
                                                                                                                                    ccaCCCAATGCTAATAAAAATCCTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTAAAAAGCATCCTTTCt               >  7:44345/1‑148 (MQ=255)
                                                                                                                                        ccAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTAAAAGCATCCtt                  <  7:235919/140‑1 (MQ=255)
                                                                                                                                        ccAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTAAAAGCATCCtt                  >  8:235919/1‑140 (MQ=255)
                                                                                                                                            tGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTAAAAAGCATCCTTTCTGGTTCCtt       >  2:320679/1‑148 (MQ=255)
                                                                                                                                              cTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACttttt                                      >  6:263825/1‑115 (MQ=255)
                                                                                                                                              cTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACttttt                                      <  5:263825/115‑1 (MQ=255)
                                                                                                                                              cTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTAAAAAGCATCCTTTCTGGTTCCtttt     >  8:141549/1‑148 (MQ=255)
                                                                                                                                                aataaAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTAAAAAGCATCCTTTCTGGTTCCttttt    >  1:18158/1‑147 (MQ=255)
                                                                                                                                                 ataaAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCGAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGAGTAAAAAGCATCCTTTCTGGTTCCTTTTTTa  <  1:40453/148‑1 (MQ=255)
                                                                                                                                                 ataaAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTAAAAAGCATCCTTTCTGGTTCCtttttt   >  2:12115/1‑147 (MQ=255)
                                                                                                                                                 |                                                                                                                                                   
CCAGGTATAACCACCTCCGAGCACCACGATATAGTCCACTTTTTGCGAATTATTCCATGTCGGATAGGTGCTTTCGATGGGACGCAGCAGGCGGTCGGCTACCGGTTGCAAACTCAATAACAAGAGCGCCAGCCACCCAATGCTAATAAAAATCTTCCCGGTTTTTTGAAAACGGCTAAACCACAGCAGCGCCAGGCCAGCGCCAATAATCAACAACATCAGCGGAAGTGGCAGCAACATATTGCCAATCACTTTTTTCAGTGTAAAAAGCATCCTTTCTGGTTCCTTTTTTA  >  NC_000913/973129‑973421

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.