| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,799,671 | C→T | 5.5% | A176T (GCA→ACA) | waaZ ← | lipopolysaccharide KdoIII transferase; lipopolysaccharide core biosynthesis protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,799,671 | 0 | C | T | 5.5% | 243.6 / 2.9 | 73 | A176T (GCA→ACA) | waaZ | lipopolysaccharide KdoIII transferase; lipopolysaccharide core biosynthesis protein |
| Reads supporting (aligned to +/- strand): ref base C (37/32); new base T (2/2); total (39/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.66e-01 | |||||||||||
AAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACAGAGATCAGCAGTTCTTTGTGAATCTGTCTCAAAATATTAAATTTAATCTTCTTTATAA > NC_000913/3799525‑3799817 | aaaTGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTgca < 6:241557/148‑1 (MQ=255) tGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTgcagca < 3:275763/148‑1 (MQ=255) gCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCaa < 8:91894/147‑1 (MQ=255) ttttGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCaa < 6:266988/147‑1 (MQ=255) gAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGt < 6:65910/147‑1 (MQ=255) gAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGt < 8:59259/147‑1 (MQ=255) gAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGt < 2:47445/147‑1 (MQ=255) gAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGt < 3:119999/147‑1 (MQ=255) aaTAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTAt < 3:294335/148‑1 (MQ=255) aCTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGt < 8:282032/135‑1 (MQ=255) aCTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGt > 7:282032/1‑135 (MQ=255) aGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGAc > 2:294536/1‑147 (MQ=255) tGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACTAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCATCAAAGGAAATAGTATGGCATGAGCAATAACCAAGACTAATGt > 8:124026/1‑147 (MQ=255) gggATTTTTATTCTCATCATAGAAACGAGGACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACAAAGACTAATGTcc > 8:161033/1‑148 (MQ=255) gggATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAAt > 4:134961/1‑114 (MQ=255) gggATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAAt < 3:134961/114‑1 (MQ=255) gggATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGt < 6:206972/117‑1 (MQ=255) gggATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGt > 5:206972/1‑117 (MQ=255) gggATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGc < 5:29500/122‑1 (MQ=255) gggATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGc > 6:29500/1‑122 (MQ=255) gggATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTcc > 1:210855/1‑148 (MQ=255) gggATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTcc > 5:131248/1‑148 (MQ=255) gggATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTcc > 3:44572/1‑148 (MQ=255) gggATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTcc > 3:48658/1‑148 (MQ=255) gggATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGAGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACAAAGACTAATGTcc > 7:131215/1‑148 (MQ=255) ggATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCa < 5:154732/128‑1 (MQ=255) ggATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCa > 6:154732/1‑128 (MQ=255) gATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCtt > 2:115046/1‑148 (MQ=255) ttttATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGc > 6:294398/1‑147 (MQ=255) ttATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCaa < 1:115046/147‑1 (MQ=255) ttCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATaa > 1:64963/1‑123 (MQ=255) ttCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATaa < 2:64963/123‑1 (MQ=255) tctcATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATc > 8:108091/1‑147 (MQ=255) tcatcaTAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCaa < 1:294536/148‑1 (MQ=255) catcatAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAAc > 8:264739/1‑148 (MQ=255) atcatAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCa < 6:131248/145‑1 (MQ=255) tcatAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGTAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAAc > 5:253616/1‑146 (MQ=255) catAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAg < 3:262639/121‑1 (MQ=255) catAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAg > 4:262639/1‑121 (MQ=255) catAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCAATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAAc > 7:266846/1‑145 (MQ=255) agaACAGCTACCCGTTAAATCAAGACCAGAACAATTAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCtttt < 4:48658/148‑1 (MQ=255) gaACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCtttt < 4:44572/147‑1 (MQ=255) aaCAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCtttttt < 7:264739/148‑1 (MQ=255) cAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAg < 2:210855/148‑1 (MQ=255) cAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGt > 7:187078/1‑70 (MQ=255) cAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGt < 8:187078/70‑1 (MQ=255) aaGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCAATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACAGAGATc < 8:266846/148‑1 (MQ=255) aGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGt > 1:314543/1‑63 (MQ=255) aGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGt < 2:314543/63‑1 (MQ=255) aGAACAAATAATCCGCGCAAACTTAAGTGAATATGCGAATTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGAAGACCTTTTTTAGACAACGGTACAGAGATCAGCAGt > 4:123711/1‑148 (MQ=255) gAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTATAGAAAACGGTACAGAGATcagcagat > 4:43345/1‑146 (MQ=255) aCAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCtttttt < 8:200605/120‑1 (MQ=255) aCAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCtttttt > 7:200605/1‑120 (MQ=255) ataatCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTa > 7:178505/1‑81 (MQ=255) ataatCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTa < 8:178505/81‑1 (MQ=255) taatCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACAGAGATcagca > 3:292698/1‑138 (MQ=255) taatCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACAGAGATcagca < 4:292698/138‑1 (MQ=255) taatCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACAGAGATCAGCAGTTCTTtgt > 1:223936/1‑147 (MQ=255) atCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATTGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACAGAGATCAGCAGTTCTTTGTGa < 5:294398/147‑1 (MQ=255) gcgcATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACAGAGATCAGCAGTTCTTTGTGAATCTg < 3:43345/148‑1 (MQ=255) cATACTTAAGTGAATATGCGATTTGAATTGTAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACAGAGATCAGCAGTTCTTTGTGAATCTGtct < 6:253616/148‑1 (MQ=255) aattAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATCATCATTAACCAAGACAAATGTCCTAGCAACATCAAACCAGACGACCATATTAAGACAAAGGTACAGAGATCAGCAGTTCTTTTTGAATCAGTCTCa > 2:195692/3‑147 (MQ=255) aCTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACAGAGATCAGCAGTTCTTTGTGAATCTGTCTCa > 8:184901/1‑147 (MQ=255) aGTGAATATGCGATTTGAATTGTAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACAGAGATCAGCAGTTCTTTGTGAAt > 3:132421/1‑134 (MQ=255) aGTGAATATGCGATTTGAATTGTAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACAGAGATCAGCAGTTCTTTGTGAAt < 4:132421/134‑1 (MQ=255) tGAATATGCGATTTGAATTTCAGAAAAGGCAATAGTATGTAATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGAAGACCTTTTTTAGACAACGGTACAGAGATCAGAAGTTCTTTGTGAATCTGTCTCAAAATAtt > 2:5404/1‑147 (MQ=255) tatGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACAGAGATCAGCAGTTCTTTGTGAATCTGTCTCAAAATATTAAAtt > 2:147382/1‑148 (MQ=255) atGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACAGAGATCAGCAGTTCTTTGTGAATCTGTCTCAAAATATTAAAtt > 4:287687/1‑147 (MQ=255) atGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACAGAGATCAGCAGTTCTTTGTGAATCTGTCTCAAAATATTAAAtt > 5:21155/1‑147 (MQ=255) tGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACAGAGATCAGCAGTTCTTTGTGAATCTGTCTCAAAATATTAAAttt > 8:126223/1‑147 (MQ=255) tGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACAGAGATCAGCAGTTCTTTGTGAATCTGTCTCAAAATATTAAAttt < 7:126223/147‑1 (MQ=255) cGAATTGATTTTCATCAAAGGCAATTGTATGGCATGAGCAATATCAAAGACTAATTTCCTTGCAAAATCCAACTAGACTACCTTTTTTAGACAACGGTACAGAGCTCAGCAGTTCTTTGTGAATCTGTCTCAAAATATTAAATTTaa < 8:131215/147‑1 (MQ=255) tttGAATTGCAGCAACGGCAATAGTAGGGCATGAGCAATAACCAAGACTACTGTCATTTCAAAATACAACAAGACGAACTTTATTAGAAAACGGTACAGAGATCAGCAGTTCTTTGTGAATCTGTCTAAAAATATTAAATTTAAtctt < 1:5404/148‑1 (MQ=255) tttGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACAGAGATCAGCAGTTCTTTGTGAATCTGTCTCAAAATATTAAATTTAAtctt > 3:57735/1‑148 (MQ=255) aaTTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACAGAGATCAGCAGTTCTTTGTGAATCTGTCTCAAAATATTAAATTTAATcttctt > 5:240276/1‑147 (MQ=255) cagcaAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACAGAGATCAGCAGTTCTTTGTGAATCTGTCTCAAAATATTAAATTTAATCTTCTTTATaa < 7:184901/147‑1 (MQ=255) | AAATGGCAATATTTTGAATAAATCCCTACTTAATTCCGAGGGCATGGGATTTTTATTCTCATCATAGAAACGAGAACAGCTACCCGTTAAATCAAGACCAGAACAAATAATCCGCGCATACTTAAGTGAATATGCGATTTGAATTGCAGCAAAGGCAATAGTATGGCATGAGCAATAACCAAGACTAATGTCCTTGCAAAATCCAACCAGACGACCTTTTTTAGACAACGGTACAGAGATCAGCAGTTCTTTGTGAATCTGTCTCAAAATATTAAATTTAATCTTCTTTATAA > NC_000913/3799525‑3799817 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |