Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,335,153 Δ593 bp [ymiA]yciX [ymiA], yciX

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1335153 1335745 593 22 [0] [2] 26 [ymiA]–yciX [ymiA],yciX

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 13351520 (0.000)22 (0.590) 20/236 1.0 95.7% coding (29/165 nt) ymiA uncharacterized protein
?NC_000913 1335746 = 2 (0.050)intergenic (+288/‑85) yciX/acnA uncharacterized protein/aconitate hydratase 1; aconitase A

AAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGGTTAGCAATGCCTTCTGGAAATCAGGAACCCCGCCGCGATCCTGAATTAAAACGTAAAGCCTGGCTGGCGGTTTTTCTTGGTTCTGCACTTTTCTGGGTGGTTGTCGCACT  >  NC_000913/1335013‑1335263
                                                                                                                                           |                                                                                                               
aaaaGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgtta                                                                                                        >  5:15855‑M1/1‑140 (MQ=255)
                 aCTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttac                                                                                                       >  3:176696‑M1/1‑123 (MQ=255)
                 aCTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttac                                                                                                       <  4:176696‑M1/133‑11 (MQ=255)
                                       gCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaa                                                                    >  6:137313‑M1/1‑101 (MQ=255)
                                                    cTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcg                                                    >  7:116474‑M1/1‑88 (MQ=255)
                                                         ggttctTTAGGATTTGTCTCATCGTATGATTAATTACACAAATCGTTCAACGTCTTGCTGATAAGTGATTGCGATTATATGAGaaatcgttacgcgatgtttgtgatatctttaatattcaccctgaagagaatcagatcttcgcaacc                                               >  7:38841‑M1/3‑83 (MQ=255)
                                                                tAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtca                                         <  6:15855‑M1/148‑73 (MQ=255)
                                                                   gATTTGTGTCATCGTATGATTAATTACTCCAATCGTTCAACGTGTTTCTGATATGTGATGGCGATTATATGAGtaatcgttacgctatgtttgtgttatctttaatattcaccctgaagagaatctgggcttcgcaacgctgtcattaa                                     <  8:38841‑M1/149‑77 (MQ=255)
                                                                   gATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatc                                                             <  5:162828‑M1/125‑53 (MQ=255)
                                                                   gATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatc                                                             >  6:162828‑M1/1‑73 (MQ=255)
                                                                         tctcATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaa                                     >  8:19807‑M1/1‑67 (MQ=255)
                                                                         tctcATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaa                                     <  7:19807‑M1/143‑77 (MQ=255)
                                                                             aTCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagct                            <  8:116474‑M1/148‑86 (MQ=255)
                                                                                     attaattaCACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtc                    <  2:86083‑M1/148‑94 (MQ=255)
                                                                                     attaattaCACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtc                    >  1:86083‑M1/1‑55 (MQ=255)
                                                                                                      ttCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaagccag  <  5:137313‑M1/149‑112 (MQ=255)
                                                                                                                          tGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaag      <  7:27876‑M1/125‑108 (MQ=255)
                                                                                                                          tGATGGCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaaccctacgagaag      >  8:27876‑M1/1‑18 (MQ=255)
                                                                                                                              ggCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaa                  <  6:69361‑M1/109‑96 (MQ=255)
                                                                                                                              ggCGATTATATGAGaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggaggagctatgtcgtcaa                  >  5:69361‑M1/1‑14 (MQ=255)
                                                                                                                                         gagaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggagga                               >  7:115822‑M1/1‑3 (MQ=255)
                                                                                                                                         gagaaatcgttacgcgatgtttgtgttatctttaatattcaccctgaagagaatcagggcttcgcaaccctgtcattaaggagga                               <  8:115822‑M1/85‑83 (MQ=255)
                                                                                                                                           |                                                                                                               
AAAAGATTGAATTATTCACTGGAGACGATTCGTAAATTCGCTGGATTTTTGACTAAAGTTTCTTTAGGATTTGTCTCATCGTATGATTAATTACACCAATCGTTCAACGTCTTGCTGATAAGTGATGGCGATTATATGAGGTTAGCAATGCCTTCTGGAAATCAGGAACCCCGCCGCGATCCTGAATTAAAACGTAAAGCCTGGCTGGCGGTTTTTCTTGGTTCTGCACTTTTCTGGGTGGTTGTCGCACT  >  NC_000913/1335013‑1335263

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.