Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,001,645 Δ5 bp coding (220‑224/951 nt) corA → magnesium/nickel/cobalt transporter

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4001645 4001649 5 40 [0] [0] 40 corA magnesium/nickel/cobalt transporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40016440 (0.000)40 (1.080) 36/236 0.2 100% coding (219/951 nt) corA magnesium/nickel/cobalt transporter
?NC_000913 4001650 = 0 (0.000)coding (225/951 nt) corA magnesium/nickel/cobalt transporter

TTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAG  >  NC_000913/4001511‑4001791
                                                                                                                                     |                                                                                                                                                   
ttGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctt                                                                                                                                      <  2:209448‑M1/149‑16 (MQ=255)
         tCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgc                                                                                                                             >  1:155240‑M1/1‑125 (MQ=255)
                                           aTCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatt                                                                                            >  4:101154‑M1/1‑91 (MQ=255)
                                                  cTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcac                                                                                                                   <  6:2108‑M1/118‑35 (MQ=255)
                                                  cTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcac                                                                                                                   >  5:2108‑M1/1‑84 (MQ=255)
                                                       ccAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcc                                                                                                                                                 <  6:30405‑M1/83‑5 (MQ=255)
                                                       ccAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcc                                                                                                                                                 >  5:30405‑M1/1‑79 (MQ=255)
                                                        cAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatg                                                                              <  1:172913‑M1/149‑72 (MQ=255)
                                                        cAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcc                                                                                                                                                 <  1:63799‑M1/82‑5 (MQ=255)
                                                        cAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctcc                                                                                                                                                 >  2:63799‑M1/1‑78 (MQ=255)
                                                         agagCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatgg                                                                             <  1:138229‑M1/149‑73 (MQ=255)
                                                              cTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTACATctccttcttcttctttgaagatgcggaagatcacgc                                                                                                                 <  4:79270‑M1/108‑37 (MQ=255)
                                                              cTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTACATctccttcttcttctttgaagatgcggaagatcacgc                                                                                                                 >  3:79270‑M1/1‑72 (MQ=255)
                                                                 gCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagat                                                                                                                               >  7:133904‑M1/1‑69 (MQ=255)
                                                                 gCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagat                                                                                                                               <  8:133904‑M1/91‑23 (MQ=255)
                                                                      ccgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttc                                                                                                                                           <  3:164275‑M1/74‑11 (MQ=255)
                                                                      ccgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttc                                                                                                                                           >  4:164275‑M1/1‑64 (MQ=255)
                                                                        gcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactct                                                              >  4:163056‑M1/1‑62 (MQ=255)
                                                                                cTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagc                                                      <  2:155240‑M1/149‑96 (MQ=255)
                                                                                         aTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtgggatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgc                                             >  2:170677‑M1/1‑45 (MQ=255)
                                                                                         aTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgc                                             >  5:95197‑M1/1‑45 (MQ=255)
                                                                                         aTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtct                                                                       >  4:72524‑M1/1‑45 (MQ=255)
                                                                                         aTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtct                                                                       <  3:72524‑M1/123‑79 (MQ=255)
                                                                                                              tttGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtct                                <  8:63318‑M1/141‑118 (MQ=255)
                                                                                                              tttGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtct                                >  7:63318‑M1/1‑24 (MQ=255)
                                                                                                                tGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtct                                                                       <  5:63967‑M1/100‑79 (MQ=255)
                                                                                                                tGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtct                                                                       >  6:63967‑M1/1‑22 (MQ=255)
                                                                                                                 gAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgat                                                                               <  2:143205‑M1/91‑71 (MQ=255)
                                                                                                                  aaGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgc                     <  6:95197‑M1/148‑129 (MQ=255)
                                                                                                                  aaGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtga                                                  <  8:46918‑M1/119‑100 (MQ=255)
                                                                                                                   aGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccact                                                                                                    >  1:161091‑M1/1‑19 (MQ=255)
                                                                                                                   aGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccact                                                                                                    <  2:161091‑M1/68‑50 (MQ=255)
                                                                                                                    gacgacgacGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgccc                                           <  7:103179‑M1/124‑107 (MQ=255)
                                                                                                                    gacgacgacGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgccc                                           >  8:103179‑M1/1‑18 (MQ=255)
                                                                                                                     acgacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgt                                                          >  7:126210‑M1/1‑17 (MQ=255)
                                                                                                                     acgacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgt                                                          <  8:126210‑M1/108‑92 (MQ=255)
                                                                                                                       gacgacgGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgt                                                                                  <  8:73037‑M1/82‑68 (MQ=255)
                                                                                                                       gacgaagGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgt                                                                                  >  7:73037‑M1/1‑15 (MQ=255)
                                                                                                                                cTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtgggatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgcccgtagccagt      <  1:170677‑M1/149‑144 (MQ=255)
                                                                                                                                    aTctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatacgtgatggtcgtctgtttactctgcgtgagcgtgaactgacctcttttagtctgtatcgtatgcgtgcacgtatccagacgat  >  4:21694‑M1/1‑2 (MQ=255)
                                                                                                                                     |                                                                                                                                                   
TTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAG  >  NC_000913/4001511‑4001791

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.