New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3342725 =106 (1.340)4 (0.050) 4/250 NT 3.8% coding (453/567 nt) kdsC 3‑deoxy‑D‑manno‑octulosonate 8‑phosphate phosphatase
?NC_000913 3342747 = 101 (1.330)coding (475/567 nt) kdsC 3‑deoxy‑D‑manno‑octulosonate 8‑phosphate phosphatase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 119 total aligned reads displayed.

AACTGATCGCCTTTAGCGATCTGCTGGAAAAACTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTAT  >  NC_000913/3342577‑3342872
                                                                                                                                                    |                                                                                                                                                   
aacTGATCGCCTTTAGCGATCTGCTGGAAAAACTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCcg                                                                                                                                                     >  1:88569/1‑149 (MQ=255)
aacTGATCGCCTTTAGCGATCTGCTGGAAAAACTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATACcg                                                                                                                                                     >  6:74997/1‑149 (MQ=255)
   atcaccagaaccgccagtgatagcacaatgataacccaacgtctggctttactcatatcgattgccctttggcttcatccagtttgccctgcgccaggagtaataagtcgcaaacttcgcgcactgcgccacgaccgccagcaatgcgc                                                                                                                                                  <  4:5423‑M1/4‑1 (MQ=255)
     aTCGCCTTTAGCGATCTGCTGGAAAAACTGGCGATTGCCCCGGAAAATGTTGCTTATGTCGGCTATGATATCATCGACTGGCCGTTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTTTTGATCCCgcgcgc                                                                                                                                                >  5:101412/1‑149 (MQ=255)
     aTCGCCTTTAGCGATCTGCTGGAAAAACTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCgcgcgc                                                                                                                                                >  4:184373/1‑149 (MQ=255)
     aTCGCCTTTAGCGATCTGCTGGAAAAACTGGCGATAGACCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCgcgcgc                                                                                                                                                >  7:274523/1‑149 (MQ=255)
        gCCTTTAGCGATCTGCTGGAAAAACTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGa                                                                                                                                             <  3:320995/149‑1 (MQ=255)
         ccTTTAGCGATCTGCTGGAAAAACTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGAt                                                                                                                                            >  7:296736/1‑149 (MQ=255)
          cTTTAGCGATCTGCTGGAAAAACTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGAt                                                                                                                                            >  1:280550/1‑148 (MQ=255)
           tttAGCGATCTGCTGGAAAAACTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTa                                                                                                                                          >  5:306851/1‑149 (MQ=255)
             tAGCGATCTGCTGGAAAAACTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTAc                                                                                                                                         <  8:315883/148‑1 (MQ=255)
              aGCGATCTGCTGGAAAAACTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCCGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGt                                                                                                                                       >  4:332991/1‑149 (MQ=255)
                cGATCTGCTGGAAAAACTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGa                                                                                                                                     >  1:343658/1‑149 (MQ=255)
                     tgctgGAAAAACTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGAcgcg                                                                                                                                 >  5:338072/1‑148 (MQ=255)
                       ctgGAAAAACTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCCCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGAcgc                                                                                                                                  <  1:145839/145‑1 (MQ=255)
                         ggAAAAACTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTg                                                                                                                            >  2:227586/1‑149 (MQ=255)
                            aataCTGGCGAGTGCCCCGGAAAATGTGGCTTATGTCGGCGAGGAGCTCATCGACGGGCCGGTAATGGAAAAAGTGGGTTTCAGCGTCGCCGGGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTCCGTGACGCGCATTGCTg                                                                                                                         <  5:74997/146‑1 (MQ=255)
                             aaaCTGGCGATTGCCCCCGTAAATGTGGGCTATGTCCGCGATGATCGCATCGTCTGGCCGGGAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTgg                                                                                                                        <  8:311565/149‑1 (MQ=255)
                              aaCTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCCACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCCTGTCCGAAGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGc                                                                                                                       >  6:282131/1‑149 (MQ=255)
                               aCTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCg                                                                                                                      <  4:186274/149‑1 (MQ=255)
                                     gATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCggg                                                                                                                <  2:95903/149‑3 (MQ=255)
                                     gATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTg                                                                                                                <  5:292452/149‑1 (MQ=255)
                                      aTTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTgg                                                                                                               >  2:281739/1‑149 (MQ=255)
                                          ccccGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCa                                                                                                           <  6:18653/149‑1 (MQ=255)
                                           cccGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAg                                                                                                          >  1:89292/1‑149 (MQ=255)
                                            ccGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGt                                                                                                         >  8:191492/1‑149 (MQ=255)
                                            ccGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGt                                                                                                         <  4:164714/149‑1 (MQ=255)
                                             cGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTg                                                                                                        >  3:149789/1‑149 (MQ=255)
                                               gAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTgcg                                                                                                      >  3:148891/1‑149 (MQ=255)
                                                      tgGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGGGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGt                                                                                                <  3:257817/148‑1 (MQ=255)
                                                         cTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGc                                                                                            <  3:34200/149‑1 (MQ=255)
                                                         cTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGc                                                                                            <  2:343658/149‑1 (MQ=255)
                                                          ttATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGc                                                                                            >  1:368749/1‑148 (MQ=255)
                                                          ttATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCg                                                                                           >  2:170521/1‑149 (MQ=255)
                                                          ttATGTCGGAGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTCATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGc                                                                                            >  8:276822/1‑148 (MQ=255)
                                                           tATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGa                                                                                          <  1:221982/149‑1 (MQ=255)
                                                            aTGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCg                                                                                           <  4:157962/147‑1 (MQ=255)
                                                               tCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCg                                                                                           >  3:74000/1‑144 (MQ=255)
                                                               tCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCg                                                                                           <  4:74000/144‑1 (MQ=255)
                                                                cGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACttat                                                                                     <  2:89292/149‑1 (MQ=255)
                                                                 ggCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACttat                                                                                     <  6:327468/148‑1 (MQ=255)
                                                                  gCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACttatta                                                                                   <  1:281739/149‑1 (MQ=255)
                                                                    gatgatCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACttatta                                                                                   <  1:3860/147‑1 (MQ=255)
                                                                    gatgatCTCATCGACTGGCAGGTAATGGAAAAAGTTGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACt                                                                                 <  2:367163/149‑1 (MQ=255)
                                                                       gatCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCt                                                                              >  4:342075/1‑149 (MQ=255)
                                                                         tctcATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTgg                                                                            >  7:213217/1‑149 (MQ=255)
                                                                           tcATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGgcg                                                                          >  6:332204/1‑149 (MQ=255)
                                                                            ttcatccagtttgccctgcgccaggagtaataagtcgcaaacttcgcgcactgcgccacgaccgccagcaatGCGCGCCGATTACGTGACGCGCAtt                                                                                                                             <  6:149922‑M1/25‑1 (MQ=255)
                                                                            ttcatccagtttgccctgcgccaggagtaataagtcgcaaacttcgcgcactgcgccacgaccgccagcaatGCGCGCCGATTACGTGACGCGCAtt                                                                                                                             >  5:149922‑M1/73‑97 (MQ=255)
                                                                             aTCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTc                                                                                <  3:304119/141‑1 (MQ=255)
                                                                             aTCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCCGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTgg                                                                            <  1:227586/145‑1 (MQ=255)
                                                                                gACTGGCCTGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAgg                                                                      <  8:296736/148‑1 (MQ=255)
                                                                                gACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAgg                                                                      <  8:133729/148‑1 (MQ=255)
                                                                                gACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGGCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAgg                                                                      <  6:338072/148‑1 (MQ=255)
                                                                                gACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGGCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAgg                                                                      <  4:97455/148‑1 (MQ=255)
                                                                                  cTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGGGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCa                                                                   <  5:332204/149‑1 (MQ=255)
                                                                                     gCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGTCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAAc                                                                >  6:324168/1‑149 (MQ=255)
                                                                                      ccGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTAATACTCCTGGCGCAGGGCAAACt                                                               <  2:280550/149‑1 (MQ=255)
                                                                                         gTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGa                                                            >  5:90020/1‑149 (MQ=255)
                                                                                          tAATGGAAAAAGTGTGTTTTAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGGCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGAt                                                           <  6:231123/149‑1 (MQ=255)
                                                                                          tAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGAt                                                           >  6:349085/1‑149 (MQ=255)
                                                                                             tGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGCTCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATg                                                          >  5:325537/1‑147 (MQ=255)
                                                                                              ggAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAg                                                       >  6:14617/1‑149 (MQ=255)
                                                                                               gAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAg                                                       <  3:332991/148‑1 (MQ=255)
                                                                                               gAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAg                                                       <  1:170521/148‑1 (MQ=255)
                                                                                               gAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGc                                                      <  6:306851/149‑1 (MQ=255)
                                                                                                    aGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAg                                                 <  5:23894/149‑1 (MQ=255)
                                                                                                         ataagtcgcaaacttcgcgcactgcgccacgaccgccagcaatGCGCGCCGATTACGTGACgcgc                                                                                                                                >  4:343114‑M1/44‑65 (MQ=255)
                                                                                                         ataagtcgcaaacttcgcgcactgcgccacgaccgccagcaatGCGCGCCGATTACGTGACgcgc                                                                                                                                <  3:343114‑M1/22‑1 (MQ=255)
                                                                                                          tttAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAAt                                           <  2:88569/149‑1 (MQ=255)
                                                                                                            tAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATc                                          <  1:239825/148‑1 (MQ=255)
                                                                                                              aGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGat                                       <  5:122477/149‑1 (MQ=255)
                                                                                                               gCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGTGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGata                                      >  6:257072/1‑149 (MQ=255)
                                                                                                                cGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGatat                                     <  3:342075/149‑1 (MQ=255)
                                                                                                                 gTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGatat                                     >  4:289841/1‑148 (MQ=255)
                                                                                                                  tCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGa                                   <  2:352827/149‑1 (MQ=255)
                                                                                                                  tCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGa                                   <  3:184373/149‑1 (MQ=255)
                                                                                                                     ccGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGt                                 >  2:294664/1‑148 (MQ=255)
                                                                                                                     ccGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTa                                <  3:289841/149‑1 (MQ=255)
                                                                                                                          gCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGcc                           <  8:171607/149‑1 (MQ=255)
                                                                                                                          gCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGACGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGc                            >  7:22013/1‑148 (MQ=255)
                                                                                                                            cGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGa                                   >  6:296323/1‑139 (MQ=255)
                                                                                                                            cGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGa                                   <  5:296323/139‑1 (MQ=255)
                                                                                                                                  gcATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTg                   <  8:274523/149‑1 (MQ=255)
                                                                                                                                     tCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACttatta                                                                                   >  6:264581/1‑82 (MQ=255)
                                                                                                                                     tCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACttatta                                                                                   <  5:264581/82‑1 (MQ=255)
                                                                                                                                     tCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCt                                                                              <  2:127059/87‑1 (MQ=255)
                                                                                                                                     tCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCt                                                                              >  1:127059/1‑87 (MQ=255)
                                                                                                                                      ccACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTgg                                                             <  1:315723/103‑1 (MQ=255)
                                                                                                                                      ccACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTgg                                                             >  2:315723/1‑103 (MQ=255)
                                                                                                                                       cACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTa              <  7:191492/149‑1 (MQ=255)
                                                                                                                                       cACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTa              >  5:288173/1‑149 (MQ=255)
                                                                                                                                       cACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTa              <  8:213217/149‑1 (MQ=255)
                                                                                                                                        aCTGTTGATCCCGCGCTCAGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGAGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGAGATGAGTAAAGCCAGACGTTGGGTTa              >  2:212051/1‑148 (MQ=255)
                                                                                                                                          tGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCa           >  5:158700/1‑149 (MQ=255)
                                                                                                                                                tCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTgg                  >  1:331694/1‑136 (MQ=255)
                                                                                                                                                tCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTgg                  <  2:331694/136‑1 (MQ=255)
                                                                                                                                                  ccGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCt    <  6:16832/148‑1 (MQ=255)
                                                                                                                                                  ccGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTa   >  8:180927/1‑149 (MQ=255)
                                                                                                                                                   cgcgcgCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTAt  <  4:148891/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
AACTGATCGCCTTTAGCGATCTGCTGGAAAAACTGGCGATTGCCCCGGAAAATGTGGCTTATGTCGGCGATGATCTCATCGACTGGCCGGTAATGGAAAAAGTGGGTTTAAGCGTCGCCGTGGCCGATGCGCATCCACTGTTGATCCCGCGCGCCGATTACGTGACGCGCATTGCTGGCGGTCGTGGCGCAGTGCGCGAAGTTTGCGACTTATTACTCCTGGCGCAGGGCAAACTGGATGAAGCCAAAGGGCAATCGATATGAGTAAAGCCAGACGTTGGGTTATCATTGTGCTAT  >  NC_000913/3342577‑3342872

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.