| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4023516 = | 125 (1.390) | 5 (0.060) | 5/264 | 5.9 | 4.3% | intergenic (+4/‑38) | tatC/tatD | TatABCE protein translocation system subunit/quality control of Tat‑exported FeS proteins; Mg‑dependent cytoplasmic DNase |
| ? | NC_000913 | 4023538 = | 106 (1.260) | intergenic (+26/‑16) | tatC/tatD | TatABCE protein translocation system subunit/quality control of Tat‑exported FeS proteins; Mg‑dependent cytoplasmic DNase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCAGGTTAGTGCCGGTGATGAGTAGCCCATTAACTCCCGCGTCAAAAGCGCACGCTACAACATCATCACGGTCTTTCGCAAATTGCGAACTGGTCAAATTAACGCCGATATCAAACATCCTGTACTCCATATGACAACCGCCCTGACGGGCGGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4023671‑4023516‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcggttgTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACTCATCACCGGCACTAACCTGCGTGAAAGCCAGC > NC_000913/4023538‑4023683 GCAGGTTAGTGCCGGTGATGAGTAGCCCATTAACTCCCGCGTCAAAAGCGCACGCTACAACATCATCACGGTCTTTCGCAAATTGCGAACTGGTCAAATTAACGCCGATATCAAACATCCTGTACTCCATATGACAACCGCCCTGACGG > 7:387747/1‑149GCAGGTTAGTGCCGGTGATGAGTAGCCCATTAACTCCCGCGTCAAAAGCGCACGCTACAACATCATCACGGTCTTTCGCAAATTGCGAACTGGTCAAATTAACGCCGATATCAAACATCCTGTACTCCATATGACAACCGCCCTGACGG > 3:297855/1‑149 CAGGTTAGTGCCGGTGATGAGTAGCCCATTAACTCCCGCGTCAAAAGCGCACGCTACAACATCATCACGGTCTTTCGCAAATTGCGAACTGGTCAAATTAACGCCGATATCAAACATCCTGTACTCCATATGACAACCGCCCTGACGGG < 5:168465/149‑1 GTTAGTGCCGGTGATGAGTAGCCCATTAACTCCCGCGTCAAAAGCGCACGCTACAACATCATCACGGTCTTTCGCAAATTGCGAACTGGTCAAATTAACGCCGATATCAAACATCCTGTACTCCATATGACAACCGCCCTGACGGGCGG > 4:200544/1‑149 GTTAGTGCCGGTGATGAGTAGCCCATTAACTCCCGCGTCAAAAGCGCACGCTACAACATCATCACGGTCTTTCGCAAATTGCGAACTGGTCAAATTAACGCCGATATCAAACATCCTGTACTCCATATGACAACCGCCCTGACGGGCGG < 8:100031/149‑1 CAACATCATCACGGTCTTTCGCAAATTGCGAACTGGTCAAATTAACGCCGATATCAAACATCCTGTACTCCATATGACAACCGCCCTGACGGGCGGTT > 4:264534/1‑98 CAACATCATCACGGTCTTTCGCAAATTGCGAACTGGTCAAATTAACGCCGATATCAAACATCCTGTACTCCATATGACAACCGCCCTGACGGGCGGTT < 3:264534/98‑1 AACTGGTCAAATTAACGCCGATATCAAACATCCTGTACTCCATATGACAACCGCCCTGACGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAG > 6:226632/1‑149 TCAAATTAACGCCGATATCAAACATCCTGTACTCCATATGACAACCGCCCTGACGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTA < 7:171266/142‑1 TCAAATTAACGCCGATATCAAACATCCTGTACTCCATATGACAACCGCCCTGACGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTA > 8:171266/1‑142 AACATCCTGTACTCCATATGACAACCGCCCTGACGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAAT < 5:226632/149‑1 ACAACCGCCCTGACGGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACTCATCACCGGCAC > 7:166894/1‑149 GGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACTCATCACCGGCACTAACCTGCGTGAAA < 3:353114/149‑1 GGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACTCATCACCGGCACTAACCTGCGTGAAA < 1:237549/149‑1 GGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACTCATCACCGGCACTAACCTGCGTGA > 7:45024/1‑147 GGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCATGCGCTTTTGACGCGGGAGTTAATGGGCTACTCATCACCGGCACTAACCTGCGTGAAA < 2:5889/149‑1 GGGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGCAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACTCATCACCGGCACTAACCTGCGTGAAA < 4:356583/149‑1 GGCGGTTGTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACTCATCACCGGCACTAACCTGCGTGAAAG > 4:150895/1‑149 CGGTTGTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACTCATCACCGGCACTAACCTGCGTGAAAGCC < 7:305927/149‑1 GTTGTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTGCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACTCATCACCGGCACTAACCTGCGTGAAAGACAG < 4:347125/149‑1 TTGTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACTCATCACCGGCACTAACCTGCGTGAAAGCCAGC < 1:335991/149‑1 GCAGGTTAGTGCCGGTGATGAGTAGCCCATTAACTCCCGCGTCAAAAGCGCACGCTACAACATCATCACGGTCTTTCGCAAATTGCGAACTGGTCAAATTAACGCCGATATCAAACATCCTGTACTCCATATGACAACCGCCCTGACGGGCGGTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4023671‑4023516‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcggttgTCATATGGAGTACAGGATGTTTGATATCGGCGTTAATTTGACCAGTTCGCAATTTGCGAAAGACCGTGATGATGTTGTAGCGTGCGCTTTTGACGCGGGAGTTAATGGGCTACTCATCACCGGCACTAACCTGCGTGAAAGCCAGC > NC_000913/4023538‑4023683 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |