New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3094073	NA (NA)	6 (0.190)	5/246	3.3	NA	noncoding (108/125 nt)	REP216 (repetitive extragenic palindromic) element; contains 3 REP sequences	REP216 (repetitive extragenic palindromic) element; contains 3 REP sequences
	?	NC_000913	= 3094083	NA (NA)					noncoding (118/125 nt)	REP216 (repetitive extragenic palindromic) element; contains 3 REP sequences	REP216 (repetitive extragenic palindromic) element; contains 3 REP sequences
Rejected: Coverage evenness skew score above cutoff.

TCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGATAACTCTGCTGAAACGTTATCATCCCCACCTGCTGCCCGGTTTGAATAACATGCGGTAACTGGTGGGTTTTCCCTTCGCGAATCAAATTCCC  >  NC_000913/3093954‑3094222                                                                                                                                  |                                                                                                                                            tcGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGc                                                                                                                                 <  8:132581/142‑1 (MQ=255) tcGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGc                                                                                                                                 >  7:132581/1‑142 (MQ=255) tcGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTca                                                                                                                          >  8:9764/1‑149 (MQ=255)    cgTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTcaca                                                                                                                        >  2:72922/1‑148 (MQ=255)           ttGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCt                                                                                                                >  2:1587/1‑149 (MQ=255)             gCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCtt                                                                                                               <  7:9764/148‑1 (MQ=255)                          tGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGc                                                                                                 >  1:110759/1‑149 (MQ=255)                             acacCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGa                                                                                              >  1:58681/1‑149 (MQ=255)                               acCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGAt                                                                                             >  7:83775/1‑148 (MQ=255)                                       cAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGATAACTctgc                                                                                     <  8:83775/148‑1 (MQ=255)                                               aTCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCtt                                                                                                               <  4:97944/114‑1 (MQ=255)                                               aTCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGATAACTCTGCTGAAACGt                                                                             >  1:173648/1‑148 (MQ=255)                                               aTCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGATAACTCTGCTGAAACGt                                                                             >  4:131285/1‑148 (MQ=255)                                                   ggCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAAc                                                                                                                     >  3:130085/1‑104 (MQ=255)                                                   ggCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAAc                                                                                                                     <  4:130085/104‑1 (MQ=255)                                                     cAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGATAACTCTGCTGAAACGTTatcatc                                                                      <  1:1587/149‑1 (MQ=255)                                                          gCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGATAACTCTGCTGAAACGTTATCATCCCCAc                                                                 >  8:111508/1‑149 (MQ=255)                                                          gCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGATAACTCTGCTGAAACGTTATCATCCCCAc                                                                 <  2:173648/149‑1 (MQ=255)                                                                  tCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGATAACTCTGCTGAAACGTTATCATCCCCACCTGCTGcc                                                         <  2:110759/149‑1 (MQ=255)                                                                         aGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGATAACTCTGCTGAAACGTTATCATCCCCACCTGCTGCCCGGttt                                                   <  3:131285/148‑1 (MQ=255)                                                                          gACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGATAACTCTGCTGAAACGTTatc                                                                         >  1:148821/1‑125 (MQ=255)                                                                          gACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGATAACTCTGCTGAAACGTTatc                                                                         <  2:148821/125‑1 (MQ=255)                                                                            cgcgTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGATAACTCTGCTGAAACGTTATCATCCCCACCTGCTGCCCGGTTTGaa                                                <  2:58681/148‑1 (MQ=255)                                                                            cgcgTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGATAACTCTGCTGAAACGTTATCATCCCCACCTGCTGCCCGGTTTGAAt                                               <  1:72922/149‑1 (MQ=255)                                                                                     gTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGcc                                                                                                                  <  1:47233/73‑1 (MQ=255)                                                                                     gTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGcc                                                                                                                  >  2:47233/1‑73 (MQ=255)                                                                                          aTCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGATAACTCTGCTGAAACGTTATCATCCCCACCTGCTGCCCGGTTTGAATAACATGCGGTAACt                                 <  7:111508/149‑1 (MQ=255)                                                                                                 aTTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGATAACTCTGCTGAAACGTTATCATCCCCACCTGCTGCCCGGTTTGAATAACATGCGGTAACtg                                >  4:7170/1‑143 (MQ=255)                                                                                                 aTTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGATAACTCTGCTGAAACGTTATCATCCCCACCTGCTGCCCGGTTTGAATAACATGCGGTAACtg                                <  3:7170/143‑1 (MQ=255)                                                                                                        gCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGATAACTCTGCTGAAACGTTATCATCCCCACCTGCTGCCCGGTTTGAATAACATGCGGTAACTGGTGGGTTTTCCCt                   >  6:89711/1‑149 (MQ=255)                                                                                                          cTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGATAACTCTGCTGAAACGTTATCATCCCCACCTGCTGCCCGGTTTGAATAACATGCGGTAACTGGTGGGTTTTCCCTTc                 >  2:141539/1‑149 (MQ=255)                                                                                                                 ggCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGATAACTCTGCTGAAACGTTATCATCCCCACCTGCTGCCCGGTTTGaa                                                >  1:24879/1‑111 (MQ=255)                                                                                                                 ggCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGATAACTCTGCTGAAACGTTATCATCCCCACCTGCTGCCCGGTTTGaa                                                <  2:24879/111‑1 (MQ=255)                                                                                                                       aTAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGATAACTCTGCTGAAACGTTATCATCCCCACCTGCTGCCCGGTTTGAATAACATGCGGTAACTGGTGGGTTTTCCCTTCGCGAATCAAATTc    >  6:49995/1‑149 (MQ=255)                                                                                                                          aGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGATAACTCTGCTGAAACGTTATCATCCCCACCTGCTGCCCGGTTTGAATAACATGCGGTAACTGGTGGGTTTTCCCTTCGCGAATCAAATTccc  <  1:141539/148‑1 (MQ=255)                                                                                                                                  |                                                                                                                                            TCGCGTCTTATTGCCGGATGCGGCGTGAACACCTTATCCAGCACACATCTGGCAGCGGCTATAGGTCTGATAAGACGCGTTAGCGTCGCATCAGACATTTATTGCCTTTGTAGGCCCGATAAGCTTGCGCATCGGGCATGGCAACGTCACAAACGCCCTTCCCCCACCCGGTGCTGATAACTCTGCTGAAACGTTATCATCCCCACCTGCTGCCCGGTTTGAATAACATGCGGTAACTGGTGGGTTTTCCCTTCGCGAATCAAATTCCC  >  NC_000913/3093954‑3094222

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.