New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3175946 =64 (1.530)6 (0.150) 5/244 4.2 9.3% coding (61/582 nt) yqiA acyl CoA esterase
?NC_000913 3175974 = 56 (1.420)coding (33/582 nt) yqiA acyl CoA esterase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CCGCCATGTTCCAGGACAATGGATTCCAGCAGCTCTGCCGCGTCGGAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGTTGGAAACGTGTGTCCGCCAGGCGATGCACCTCGGTGGTCAGCGTGCCATCAGCATGTAACTCGAGA  >  NC_000913/3175828‑3176099
                                                                                                                                                  |                                                                                                                             
ccGCCATGTTCCAGGACAATGGATTCCAGCAGCTCTGCCGCGTCGGAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGtt                                                                                                                             <  2:165415/149‑1 (MQ=255)
 cGCCATGTTCCAGGACAATGGATTCCAGCAGCTCTGCCGCGTCGGAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGtt                                                                                                                             >  3:59693/1‑148 (MQ=255)
      tGTTCCAGGACAATGGATTCCAGCAGCTCTGCCGCGTCGGAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAAcc                                                                                                                       <  4:59693/149‑1 (MQ=255)
        ttCCAGGACAATGGATTCCAGCAGCTCTGCCGCGTCGGAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCgt                                                                                                                     >  8:32406/1‑149 (MQ=255)
           cAGGACAATGGATTCCAGCAGCTCTGCCGCGTCGGAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGtt                                                                                                                             <  4:82912/138‑1 (MQ=255)
           cAGGACAATGGATTCCAGCAGCTCTGCCGCGTCGGAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGtt                                                                                                                             >  3:82912/1‑138 (MQ=255)
           cAGGACAATGGATTCCAGCAGCTCTGCCGCGTCGGAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCgtgt                                                                                                                   <  2:60017/148‑1 (MQ=255)
            aGGACAATGGATTCCAGCAGCTCTGCCGCGTCGGAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGta                                                                                                                  >  1:184779/1‑148 (MQ=255)
            aGGACAATGGATTCCAGCAGCTCTGCCGCGTCGGAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGta                                                                                                                  >  7:150610/1‑148 (MQ=255)
                 aaTGGATTCCAGCAGCTCTGCCGCGTCGGAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGtaaata                                                                                                              >  6:143905/1‑147 (MQ=255)
                          cagcagCTCTGCCGCGTCGGAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCg                                                                                                      >  8:114168/1‑146 (MQ=255)
                          cagcagCTCTGCCGCGTCGGAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCg                                                                                                      <  7:114168/146‑1 (MQ=255)
                          cagcagCTCTGCCGCGTCGGAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCg                                                                                                      >  8:117005/1‑146 (MQ=255)
                          cagcagCTCTGCCGCGTCGGAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCg                                                                                                      <  7:117005/146‑1 (MQ=255)
                          cagcagCTCTGCCGCGTCGGAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTa                                                                                                    <  7:5781/148‑1 (MQ=255)
                           agcagcTCTGCCGCGTCGGAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTa                                                                                                    <  3:100753/147‑1 (MQ=255)
                           agcagcTCTGCCGCGTCGGAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTa                                                                                                    >  4:100753/1‑147 (MQ=255)
                                ctctGCCGCGTCGGAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCa                                                                                             <  6:99745/149‑1 (MQ=255)
                                       gcgTCGGAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCgtgt                                                                                                                   >  1:87945/1‑120 (MQ=255)
                                       gcgTCGGAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCgtgt                                                                                                                   <  2:87945/120‑1 (MQ=255)
                                             gAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTg                                                                                  >  1:27244/1‑147 (MQ=255)
                                             gAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTg                                                                                  >  5:35365/1‑147 (MQ=255)
                                             gAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTg                                                                                  >  5:5631/1‑147 (MQ=255)
                                                 gATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCgg                                                                            <  6:5631/149‑1 (MQ=255)
                                                 gATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCgg                                                                            <  6:35365/149‑1 (MQ=255)
                                                  aTACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGtaaata                                                                                                              >  8:115010/1‑114 (MQ=255)
                                                    aCGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCgt                                                                                                                     <  6:183061/105‑1 (MQ=255)
                                                    aCGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCgt                                                                                                                     >  5:183061/1‑105 (MQ=255)
                                                        cggcAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAgg                                                                     <  7:32406/149‑1 (MQ=255)
                                                          gcAACTGCGGACTGATCCTCTGATCGTGAGGGTGATGTTCCGCCAGCCTGTTGTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGATACCGTGTTTATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGtt                                                                   <  7:10020/149‑1 (MQ=255)
                                                              cTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGTTGGa                                                                >  6:86841/1‑148 (MQ=255)
                                                               tGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCgt                                                                                                                     <  8:51819/94‑1 (MQ=255)
                                                               tGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCgt                                                                                                                     >  7:51819/1‑94 (MQ=255)
                                                                  ggAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGTTGGAAACgt                                                           <  5:86841/149‑1 (MQ=255)
                                                                    aaTGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGTTGGAAACgtgt                                                         <  8:150610/149‑1 (MQ=255)
                                                                        atcatcTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGTTGGAAACGTGTGTcc                                                     <  2:27244/149‑1 (MQ=255)
                                                                           atcTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGTTGGAAACGTGTGTCCGc                                                   <  2:184779/148‑1 (MQ=255)
                                                                               cAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGTTGGAAACgt                                                           >  6:125979/1‑136 (MQ=255)
                                                                               cAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGTTGGAAACgt                                                           <  5:125979/136‑1 (MQ=255)
                                                                                             tGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGTTGGAAACGTGTGTCCGCCAGGCGATGCACCTCggtg                                <  7:43694/149‑1 (MQ=255)
                                                                                                  cGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGTTGGAAACGTGTGTCCGCCAGGc                                              <  8:128613/130‑1 (MQ=255)
                                                                                                  cGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGTTGGAAACGTGTGTCCGCCAGGc                                              >  7:128613/1‑130 (MQ=255)
                                                                                                        ccagTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGTTGGAAACGTGTGTCCGCCAGGCGATGCACCTCGGTGGTCAGCg                         <  8:92447/145‑1 (MQ=255)
                                                                                                        ccagTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGTGGGAAACGTGTGTCCGCCAGGCGATGCACCTCGGTGGTCAGCg                         >  7:92447/1‑145 (MQ=255)
                                                                                                         cagTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGTTGGAAACGTGTGTCCGCCAGGCGATGCACCTCGGTGGTCAGCGTGCCa                    >  5:77687/1‑149 (MQ=255)
                                                                                                          agTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGTTGGAAACGTGTGTCCGCCAGGCGATGCACCTCGGTGGTCAGCGTGCCAt                   >  3:39900/1‑149 (MQ=255)
                                                                                                          agTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGTTGGAAACGTGTGTCCGCCAGGCGATGCACCTCGGTGGTCAGCGTGCCAt                   >  7:170416/1‑149 (MQ=255)
                                                                                                            ttttttAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGTTGGAAACgtgt                                                         <  7:67283/109‑1 (MQ=255)
                                                                                                            ttttttAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGTTGGAAACgtgt                                                         >  8:67283/1‑109 (MQ=255)
                                                                                                            ttttttAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGTTGGAAACGTGTGTCCGCCAGGCGATGCACCTCGGTGGTCAGCGTGCCATCa                 <  5:143905/149‑1 (MQ=255)
                                                                                                                     aaGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGTTGGAAACGTGTGTCCGCCAGGCGATGCACCTCGGTGGTCAGCGTGCCATCAGCATGTAAc        >  3:49850/1‑149 (MQ=255)
                                                                                                                     aaGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGTTGGAAACGTGTGTCCGCCAGGCGATGCACCTCGGTGGTCAGCGTGCCATCAGCATGTAAc        <  6:77687/149‑1 (MQ=255)
                                                                                                                           gCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGTTGGAAACGTGTGTCCGCCAGGCGATGCACCTCGGTGGTCAGCGTGCCATCAGCATGTAACTCgaga  <  8:170416/149‑1 (MQ=255)
                                                                                                                           gCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGTTGGAAACGTGTGTCCGCCAGGCGATGCACCTCGGTGGTCAGCGTGCCATCAGCATGTAACTCgag   <  4:39900/148‑1 (MQ=255)
                                                                                                                                 gCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCa                                                                                             <  2:107785/52‑1 (MQ=255)
                                                                                                                                 gCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCa                                                                                             >  1:107785/1‑52 (MQ=255)
                                                                                                                                                  |                                                                                                                             
CCGCCATGTTCCAGGACAATGGATTCCAGCAGCTCTGCCGCGTCGGAAGGATACGGCGGCAACTGCGGAATGATCATCTCAACGTCAGGGTGATGTTCCGCCAGCCAGTTTTTTAACAAGCTCGCTTTTGCAGAGCGCGGCGAGCTGTTGAAACCGTGTAAATAAAGAAGCGTAGACATCAGTAGCCTTCTGAAGCGGTATCAGGTTGGAAACGTGTGTCCGCCAGGCGATGCACCTCGGTGGTCAGCGTGCCATCAGCATGTAACTCGAGA  >  NC_000913/3175828‑3176099

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.