| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4198886 | 38 (1.040) | 4 (0.120) | 4/248 | 3.8 | 11.3% | coding (97/672 nt) | nfi | endonuclease V; deoxyinosine 3' endonuclease |
| ? | NC_000913 | = 4198928 | 27 (0.780) | coding (139/672 nt) | nfi | endonuclease V; deoxyinosine 3' endonuclease | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GAGTGATTATGGATCTCGCGTCATTACGCGCTCAACAAATCGAACTGGCTTCTTCTGTGATCCGCGAGGATCGACTCGATAAAGATCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATGGTGCTGCTGAAATATCCCTCGCTTGAGCTGGTCGAGTATAAAGTTGCCCGCATCGCCACCACCATGCCTTACATTCCAGGTTTTCTTTCCTTCCGCGAATATCCTGCGCTGCTGGCAGCGTGG > NC_000913/4198782‑4199059 | gAGTGATTATGGATCTCGCGTCATTACGCGCTCAACAAATCGAACTGGCTTCTTCTGTGATCCGCGAGGATCGACTCGATAAAGATCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAgcg > 1:24897/1‑149 (MQ=255) ttATGGATCTCGCGTCATTACGCGCTCAACAAATCGAACTGGCTTCTTCTGTGATCCGCGAGGATCGACTCGATAAAGATCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATg < 4:22143/149‑1 (MQ=255) aTGGATCTCGCGTCATTACGCGCTCAACAAATCGAACTGGCTTCTTCTGTGATCCGCGAGGATCGACTCGATAAAGATCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATGGt > 5:72535/1‑149 (MQ=255) ggATCTCGCGTCATTACGCGCTCAACAAATCGAACTGGCTTCTTCTGTGATCCGCGAGGATCGACTCGATAAAGATCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATGGtg < 2:24897/148‑1 (MQ=255) aTCGAACTGGCTTCTTCTGTGATCCGCGAGGATCGACTCGATAAAGATCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATGGTGCTGCTGAAATATCCCTCGCTTGAGCTGGt > 1:43261/1‑149 (MQ=255) ggCTTCTTCTGTGATCCGCGAGGATCGACTCGATAAAGATCCACCGGATCTGATCGCCGGAGCAGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGCTGGTGCTGCTGAAATATCCCTCGCTAGAGATGGTCGAGtat > 4:31806/1‑148 (MQ=255) ttcttcTGTGATCCGCGAGGATCGACTCGATAAAGATCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATGGTGCTGCTGa < 3:62996/116‑1 (MQ=255) ttcttcTGTGATCCGCGAGGATCGACTCGATAAAGATCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATGGTGCTGCTGa > 4:62996/1‑116 (MQ=255) tgtgATCCGCGAGGATCGACTCGATAAAGATCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATGGTGCTGCTGAAATATCCCTCGc > 8:92550/1‑122 (MQ=255) tgtgATCCGCGAGGATCGACTCGATAAAGATCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATGGTGCTGCTGAAATATCCCTCGc < 7:92550/122‑1 (MQ=255) gtgATCCGCGAGGATCGACTCGATAAAGATCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATGGTGCTGCTGAAATATc > 5:76382/1‑115 (MQ=255) gtgATCCGCGAGGATCGACTCGATAAAGATCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATGGTGCTGCTGAAATATc < 6:76382/115‑1 (MQ=255) gAGGATCGACTCGATAAAGATCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATGGtgctg > 3:114265/1‑96 (MQ=255) gAGGATCGACTCGATAAAGATCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATGGtgctg < 4:114265/96‑1 (MQ=255) gACTCGTTAATGATCCAGCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGTGCGGCGATGGTGCTGCTGAAATATCCCTCGCTGGAGCTGGTCGAGTATAAAGTTGCCCGCATCGCCACCACCAt < 3:31806/148‑1 (MQ=255) aCTCGATAAAGATCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATGGTGCTGCTGAAATATCCCTCGCTTGAGCTGGTCGAGTATAAAGTTGCCCGCATCGCCACCACCATGc > 2:138609/1‑149 (MQ=255) gATAAAGATCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATGGTGCTGCTGAAATATCCCTCGCTTGAGCTGGTCGAGtat < 5:73312/117‑1 (MQ=255) gATAAAGATCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATGGTGCTGCTGAAATATCCCTCGCTTGAGCTGGTCGAGtat > 6:73312/1‑117 (MQ=255) aGATCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATGGTGCTGCTGAAATATCCCt < 5:99582/92‑1 (MQ=255) aGATCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATGGTGCTGCTGAAATATCCCt > 6:99582/1‑92 (MQ=255) tCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATGGTGCTGCTGAAATATCCCTCGCTTGAGCTGGTCGAGTATAAAGTTGCCCGCATCGCCACCACCATGCCTTACATTCCAg < 6:72535/149‑1 (MQ=255) cGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATGGTGCTGCTGAAATATCCCTCGCTTGAGCTGGTCGAGTATAAAGTTGCCCGCATCGCCACCACCATGCCTTACATTCCAGGtttt < 2:43261/149‑1 (MQ=255) aaGTGACGCGAGCGGCGATGGTGCTGCTGAAATATCCCTCGCTTGAGCTGGTCGAGTATAAAGTTGCCCGCATCGCCACCACCATGCCTTACATTCCAGGTTTTCTTTCCTTCCGCGAATATCCTgcgc < 7:1093/129‑1 (MQ=255) aaGTGACGCGAGCGGCGATGGTGCTGCTGAAATATCCCTCGCTTGAGCTGGTCGAGTATAAAGTTGCCCGCATCGCCACCACCATGCCTTACATTCCAGGTTTTCTTTCCTTCCGCGAATATCCTgcgc > 8:1093/1‑129 (MQ=255) gTGACGCGAGCGGCGATGGTGCTGCTGAAATATCCCTCGCTTGAGCTGGTCGAGTATAAAGTTGCCCGCATCGCCACCACCATGCCTTACATTCCAGGTTTTCTTTCCTTCCGCGAATATCCTGCGCTGCTGGCAGCGTgg > 7:143338/1‑141 (MQ=255) gTGACGCGAGCGGCGATGGTGCTGCTGAAATATCCCTCGCTTGAGCTGGTCGAGTATAAAGTTGCCCGCATCGCCACCACCATGCCTTACATTCCAGGTTTTCTTTCCTTCCGCGAATATCCTGCGCTGCTGGCAGCGTgg < 8:143338/141‑1 (MQ=255) aCGCGAGCGGCGATGGTGCTGCTGAAATATCCCTCGCTTGAGCTGGTCGAGTATAAAGTTGCCCGCATCGCCACCACCATGCCTTACATTCCAGGTTTTCTTTCCTTCCGCGAATATCCTGCGCTGCTGGCAGCGTgg < 4:98215/138‑1 (MQ=255) aCGCGAGCGGCGATGGTGCTGCTGAAATATCCCTCGCTTGAGCTGGTCGAGTATAAAGTTGCCCGCATCGCCACCACCATGCCTTACATTCCAGGTTTTCTTTCCTTCCGCGAATATCCTGCGCTGCTGGCAGCGTgg > 3:98215/1‑138 (MQ=255) | GAGTGATTATGGATCTCGCGTCATTACGCGCTCAACAAATCGAACTGGCTTCTTCTGTGATCCGCGAGGATCGACTCGATAAAGATCCACCGGATCTGATCGCCGGAGCCGATGTCGGGTTTGAGCAGGGCGGAGAAGTGACGCGAGCGGCGATGGTGCTGCTGAAATATCCCTCGCTTGAGCTGGTCGAGTATAAAGTTGCCCGCATCGCCACCACCATGCCTTACATTCCAGGTTTTCTTTCCTTCCGCGAATATCCTGCGCTGCTGGCAGCGTGG > NC_000913/4198782‑4199059 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |