New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 412470997 (1.070)3 (0.040) 3/242 NT 3.1% coding (2102/2199 nt) priA Primosome factor n' (replication factor Y)
?NC_000913 = 4124729 98 (1.150)coding (2082/2199 nt) priA Primosome factor n' (replication factor Y)
Rejected: Frequency below/above cutoff threshold.

Only 100 of 122 total aligned reads displayed.

AAAGTGTGATGAATATTGAATTTTTCGATCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGGAGAGGATCAGATTACGCAGTTGTTGCAGGAA  >  NC_000913/4124562‑4124857
                                                                                                                                                   |                                                                                                                                                    
aaaGTGTGATGAATATTGAATTTTTCGATCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCaa                                                                                                                                                     <  8:35099/149‑1 (MQ=255)
    tgtgATGAATATTGAATTTTCGATCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCa                                                                                                                                                <  5:298073/149‑1 (MQ=255)
      tgatgaATATTGAATTTTTCGATCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCCGCGTACCGTTAATGATGTGTTGCAAGCGCAc                                                                                                                                               >  5:174243/1‑149 (MQ=255)
      tgatgaATATTGAATTTTTCGATCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCAc                                                                                                                                               >  7:367495/1‑149 (MQ=255)
        atgaATATTGAATTTTTCGATCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCACCATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCAcgc                                                                                                                                             <  2:384409/149‑1 (MQ=255)
           aaTATTGAATTTTTCGATCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCggg                                                                                                                                          <  3:45804/149‑1 (MQ=255)
            atatTGAATTTTTCGATCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCggg                                                                                                                                          >  6:284522/1‑148 (MQ=255)
             tatTGAATTTTTCGATCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGaa                                                                                                                                        <  3:324665/149‑1 (MQ=255)
               ttGAATTTTTCGATCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTAACATTACGGGAATCCGGTATTGTATTGATGAGAGCCAGAGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAgg                                                                                                                                      >  6:209437/1‑149 (MQ=255)
                 gAATTTTTCGATCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAggg                                                                                                                                     <  4:20207/148‑1 (MQ=255)
                    tttttCGATCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGaa                                                                                                                                        <  5:43352/142‑1 (MQ=255)
                    tttttCGATCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGaa                                                                                                                                        >  6:43352/1‑142 (MQ=255)
                    tttttCGATCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCt                                                                                                                                 >  8:64094‑M2/1‑148 (MQ=255)
                      tttCGATCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCtg                                                                                                                                >  3:189256‑M2/1‑146 (MQ=255)
                       ttCGATCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAggg                                                                                                                                     <  7:98799/142‑1 (MQ=255)
                                ccTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCt                                                                                                                     <  7:183627/149‑1 (MQ=255)
                                 cTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTg                                                                                                                    >  2:132166/1‑149 (MQ=255)
                                  tCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTgc                                                                                                                   >  7:268535/1‑149 (MQ=255)
                                    gCATCGTGAGCGGTTTAACCCTCAATCGGATCAACTTCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAgcacccttcccgcgtgcgcttgcaacacatcattaac                                                                                                                 <  1:74573‑M1/149‑38 (MQ=255)
                                       tCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTgccagcg                                                                                                              >  6:73635/1‑149 (MQ=255)
                                          tGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTgccagcgcca                                                                                                           <  6:332947/149‑1 (MQ=255)
                                          tGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTgccagcgc                                                                                                             >  5:154076/1‑147 (MQ=255)
                                          tGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTgccagcgc                                                                                                             >  6:130711/1‑147 (MQ=255)
                                                 tttAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCg                                                                                                    >  3:393662/1‑149 (MQ=255)
                                                     aCCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCAc                                                                                                <  8:268535/149‑1 (MQ=255)
                                                      cccTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGtgc                                                                                                                                  <  2:323200/114‑1 (MQ=255)
                                                       ccTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGt                                                                                              >  3:300570/1‑149 (MQ=255)
                                                        cTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGtt                                                                                             >  1:90033/1‑149 (MQ=255)
                                                         tCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGa                                                                                                       >  4:115531/1‑138 (MQ=255)
                                                         tCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGa                                                                                                       <  3:115531/138‑1 (MQ=255)
                                                           aaTCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTa                                                                                           <  4:338866/148‑1 (MQ=255)
                                                            aTCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAgg                                                                                         <  6:27641/149‑1 (MQ=255)
                                                             tCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAgcacccttcccgcgtgcgcttgcaacacatca                                                                                                                      >  8:202491‑M1/1‑87 (MQ=255)
                                                             tCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAgcacccttcccgcgtgcgcttgcaacacatca                                                                                                                      <  7:202491‑M1/119‑33 (MQ=255)
                                                             tCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGt                                                                                        <  6:310187/149‑1 (MQ=255)
                                                               ggATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGTTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGAGCAAGCGCCCGCCACGTTTa                                                                                           >  6:22413/1‑144 (MQ=255)
                                                                gATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGc                                                                                      >  5:139927/1‑148 (MQ=255)
                                                                     aCATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGc                                                                                >  8:58373/1‑149 (MQ=255)
                                                                          cAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGaa                                                                           >  8:175278/1‑149 (MQ=255)
                                                                           aGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTgc                                                                                                                   >  3:359970/1‑108 (MQ=255)
                                                                               cccATTTCACCTTACGGGAATCCGGTAGTGTATTGAGGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGa                                                                      <  6:174243/149‑1 (MQ=255)
                                                                                ccATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGAc                                                                     >  4:362055/1‑149 (MQ=255)
                                                                                ccATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGAc                                                                     >  1:189948/1‑149 (MQ=255)
                                                                                  aTTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGAcc                                                                    >  5:32770/1‑148 (MQ=255)
                                                                                  aTTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGAcc                                                                    >  6:275144/1‑148 (MQ=255)
                                                                                  aTTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGAcc                                                                    >  7:9851/1‑148 (MQ=255)
                                                                                  aTTTCACATTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGAcc                                                                    >  2:272446/1‑148 (MQ=255)
                                                                                   tttCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTgcca                                                                                                                 >  4:349408/1‑102 (MQ=255)
                                                                                   tttCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGAcc                                                                    >  7:268502/1‑147 (MQ=255)
                                                                                   tttCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGAcc                                                                    >  8:63168/1‑147 (MQ=255)
                                                                                   tttCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGAcc                                                                    <  7:63168/147‑1 (MQ=255)
                                                                                        ccTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAAcc                                                             <  8:329622/149‑1 (MQ=255)
                                                                                             cGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAg                                                        <  1:132166/149‑1 (MQ=255)
                                                                                                gtaTCCTGTATTGTATTTATGAGCGCCAGCTTACCGTTAATTATGTGTTGCAAGCGCAGGCGGGAAGGGTGCTGCAACAATATCTGCCAGCTCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAAcc                                                             <  6:239013/139‑1 (MQ=255)
                                                                                                gAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGttt                                                     >  2:228696/1‑149 (MQ=255)
                                                                                                gAATCCGGTATTGTATTGATGAGCGCCAGCGTAAAGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCACCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAAcc                                                             >  5:239013/1‑141 (MQ=255)
                                                                                                   tCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGaa                                                                           <  6:244655/124‑1 (MQ=255)
                                                                                                   tCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGaa                                                                           >  5:244655/1‑124 (MQ=255)
                                                                                                   tCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCcac                                                          >  4:232046/1‑141 (MQ=255)
                                                                                                   tCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTtctc                                                  >  7:187549/1‑149 (MQ=255)
                                                                                                   tCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTtctc                                                  <  6:154076/149‑1 (MQ=255)
                                                                                                   tCCGGTATTGAATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTtctc                                                  <  5:104315/149‑1 (MQ=255)
                                                                                                            gtattgATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAgg                                                                                         <  3:386527/101‑1 (MQ=255)
                                                                                                            gtattgATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAgg                                                                                         >  4:386527/1‑101 (MQ=255)
                                                                                                             tattgATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGt                                        <  7:58373/149‑1 (MQ=255)
                                                                                                                 gatgaGCGCCAGCGTACCGTTACTGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTggg                                     <  1:272446/148‑1 (MQ=255)
                                                                                                                 gatgaGCGCCAGCGTACCGTTAATGATGTGTTGCAAgcg                                                                                                                                                  <  5:201746/39‑1 (MQ=255)
                                                                                                                 gatgaGCGCCAGCGTACCGTTAATGATGTGTTGCAAgcg                                                                                                                                                  >  6:201746/1‑39 (MQ=255)
                                                                                                                 gatgaGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTggg                                     <  4:393662/148‑1 (MQ=255)
                                                                                                                  atgaGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCt                                   >  4:222154/1‑149 (MQ=255)
                                                                                                                   tgaGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCAGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTg                                  >  6:148886/1‑149 (MQ=255)
                                                                                                                        gcCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGGagag                             >  8:225717/1‑149 (MQ=255)
                                                                                                                         ccAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGGAGAgg                            <  6:139927/149‑1 (MQ=255)
                                                                                                                          cAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGGAGAGGa                           <  8:367495/149‑1 (MQ=255)
                                                                                                                           aGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGGAGAGGAt                          >  2:10095/1‑149 (MQ=255)
                                                                                                                             cGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGGAGAGGATCa                        <  7:175278/149‑1 (MQ=255)
                                                                                                                               tACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGGAGAGGATCAGa                      <  1:228696/149‑1 (MQ=255)
                                                                                                                               tACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGGAGAGGATCAGa                      <  3:362055/149‑1 (MQ=255)
                                                                                                                                aCCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGga                                <  3:329158/138‑1 (MQ=255)
                                                                                                                                aCCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGga                                >  4:329158/1‑138 (MQ=255)
                                                                                                                                 ccGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGGAGAGGATCAGAtt                    <  5:284522/149‑1 (MQ=255)
                                                                                                                                  cGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGAAACAATATCTGCCAGCGCCTGCGACCGCAACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGGAGAGGATCAGATTa                   <  5:209437/149‑1 (MQ=255)
                                                                                                                                   gTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCtgcaacacatcattaacggtacgctggcgctcatcaatacaataccggattcccgtaaggtgaaatgggtgctggaagttgatccgattgagggttaaaccgctcacgatgc                  <  1:74573‑M2/149‑113 (MQ=255)
                                                                                                                                       ctgatgTGTTGCAAGCGCACTCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGGAGAGGATCAGATTACGCa               <  3:268535/147‑1 (MQ=255)
                                                                                                                                        tgatgTGTTGCAAGCGCACGCGGGAAGGGTGCtgcaacacatcattaacggtacgctggcgctcatcaatacaataccggattcccgtaaggtgaaatgggtgctggatgttgatccga                                           >  8:202491‑M2/1‑32 (MQ=255)
                                                                                                                                         gatgTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGGAGAGGATCAGATTACGCa               >  7:288423/1‑146 (MQ=255)
                                                                                                                                         gatgTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGGAGAGGATCAGATTACGCa               <  8:288423/146‑1 (MQ=255)
                                                                                                                                           tgtgTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGCACCCACAGTTTCTCGTCTGCCAGTGGGCTGGAGAGGATCAGATTACGCAgttgt          >  3:58064/1‑149 (MQ=255)
                                                                                                                                           tgtgTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGGAGAGGATCAGATTACGCa               >  7:10832/1‑144 (MQ=255)
                                                                                                                                           tgtgTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGGAGAGGATCAGATTACGCa               <  8:10832/144‑1 (MQ=255)
                                                                                                                                              gtTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGGAGAGGATCAGATTACGCAGttgttg        >  3:129590/1‑148 (MQ=255)
                                                                                                                                               ttGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGGAGAGGATCAGATTACGCAGTTGTTGc       <  5:73635/148‑1 (MQ=255)
                                                                                                                                               ttGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGGAGAGGATCAGATTACGCAGTTGTTGc       <  2:90033/148‑1 (MQ=255)
                                                                                                                                                 gCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGGAGAGGATCAGATTACGCAGTTGTTGCAg     <  5:275144/148‑1 (MQ=255)
                                                                                                                                                 gCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGGAGAGGATCAGATTACGCAGTTGTTGCAg     >  1:1278/1‑148 (MQ=255)
                                                                                                                                                  cagcacccttcccgcgtgcgcttgcaacacatcattaacggtacgctggcgctcatcaatacaataccggattcccgtaaggtgaaatgggtgctggatgttgatccgattgagggttaaaccgctcacgatgcgaggcggatcgaaaa   <  5:27641‑M1/149‑148 (MQ=255)
                                                                                                                                                  cagcacccttcccgcgtgcgcttgcaacacatcattaacggtacgctggcgctcatcaatacaataccggattcccgtaaggtgaaatgggtgctggatgttgatccgattgagggttaaaccgctcacgatgcgaggcggatcgaaa    >  3:189256‑M1/1‑2 (MQ=255)
                                                                                                                                                  cAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGGAGAGGATCAGATTACGCAGTTGTTGCAgg    >  4:113516/1‑148 (MQ=255)
                                                                                                                                                  cAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGGAGAGGATCAGATTACGCAGTTGTTGCAgg    >  7:157118/1‑148 (MQ=255)
                                                                                                                                                   agcacccttcccgcgtgcgcttgcaacacatcattaacggtacgctggcgctcatcaatacaataccggattcccgtaaggtgaaatgggtgctggatgttgatccgattgagggttaaaccgctcacgatgcgaggcggatcgaaaaa  >  8:64094‑M1/1‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
AAAGTGTGATGAATATTGAATTTTTCGATCCGCCTCGCATCGTGAGCGGTTTAACCCTCAATCGGATCAACATCCAGCACCCATTTCACCTTACGGGAATCCGGTATTGTATTGATGAGCGCCAGCGTACCGTTAATGATGTGTTGCAAGCGCACGCGGGAAGGGTGCTGCAACAATATCTGCCAGCGCCAGCGACCGCCACGTTTAGGTGCCAGAGCCGGAACCGGACCGAGAACCCACAGTTTCTCGTCTGCCAGTGGGCTGGAGAGGATCAGATTACGCAGTTGTTGCAGGAA  >  NC_000913/4124562‑4124857

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.