Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 1,335,762 IS5 (–) +4 bp intergenic (+304/‑66) yciX → / → acnA uncharacterized protein/aconitate hydratase 1; aconitase A

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1335762 =0 (0.000)74 (0.760) 56/282 0.8 100% intergenic (+304/‑69) yciX/acnA uncharacterized protein/aconitate hydratase 1; aconitase A
?NC_000913 = 2290113 NA (NA)noncoding (1/1195 nt) IS5 repeat region
* ? NC_000913 = 13357650 (0.000)88 (0.900) 66/282 0.5 100% intergenic (+307/‑66) yciX/acnA uncharacterized protein/aconitate hydratase 1; aconitase A
?NC_000913 2101749 = NA (NA)noncoding (1195/1195 nt) IS5 repeat region

Only 100 of 167 total aligned reads displayed.

TCTCTGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCT  >  NC_000913/1335617‑1335910
                                                                                                                                                 |                                                                                                                                                    
tctcTGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGttt                                                                                                                                                    <  2:57515/148‑1 (MQ=255)
      tCGATTCTCTTCTGGGCCGAACTCCTCTGGATCATTACTAACTTATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTAATCTTTTATCAATTTTGGGTGTTATCAAATCGTTACGCGATGTTTGggaag                                                                                                                                              <  6:67236‑M1/148‑6 (MQ=255)
          tctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCtt                                                                                                                                          <  4:140152‑M1/13‑1 (MQ=255)
               ttctGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaat                                                                                                                                      <  1:151731‑M1/147‑14 (MQ=255)
               ttctGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaat                                                                                                                                      >  7:264551‑M1/1‑134 (MQ=255)
                    ggCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcgg                                                                                                                                <  5:144123‑M1/148‑20 (MQ=255)
                     gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctcaagatgacaaacatgatctcatataacggacttgttcgcaccttccTTTGTGGTATCTTTAATATTCAccc                                                                                                                              <  1:18475‑M1/25‑1 (MQ=255)
                       cGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcgg                                                                                                                                <  8:400223‑M1/145‑20 (MQ=255)
                        tgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTg                                                                                                                            <  2:71488‑M1/27‑1 (MQ=255)
                        gAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaa                                                                                                                           <  3:389352‑M1/149‑25 (MQ=255)
                          acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaccatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTg                                                                                                                            <  3:328788‑M1/27‑1 (MQ=255)
                          acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTg                                                                                                                            <  7:327891‑M1/27‑1 (MQ=255)
                          acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTg                                                                                                                            <  1:126208‑M1/27‑1 (MQ=255)
                          acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGaa                                                                                                                          >  5:169189‑M1/120‑148 (MQ=255)
                            ggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGaa                                                                                                                          <  2:156589‑M1/29‑1 (MQ=255)
                            ggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGaa                                                                                                                          <  3:352568‑M1/29‑1 (MQ=255)
                              ctctGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtg                                                                                                                                                   >  6:127606/1‑119 (MQ=255)
                              ctctGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTtg                                                                                                                                                   <  5:127606/119‑1 (MQ=255)
                                  ggATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcgg                                                                                                                 >  2:331308‑M1/1‑115 (MQ=255)
                                   gATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggc                                                                                                                >  3:46534‑M1/1‑114 (MQ=255)
                                   gATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcgg                                                                                                                 <  5:285437‑M1/148‑35 (MQ=255)
                                      cATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcg                                                                                                                  <  4:359634‑M1/144‑34 (MQ=255)
                                       ctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCtt                                                                                                            <  6:302551‑M1/43‑1 (MQ=255)
                                       aTTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGGTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgac                                                                                                            <  1:357457‑M1/149‑40 (MQ=255)
                                           cTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactca                                                                                                         <  8:229586‑M1/148‑43 (MQ=255)
                                              cactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAAc                                                                                                      >  1:71488‑M1/100‑148 (MQ=255)
                                                 tgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCCCCCTGAAGAGAATCAGGGCTTCGCAACCCTg                                                                                                  <  2:372987‑M1/53‑1 (MQ=255)
                                                 tgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTg                                                                                                  <  8:116019‑M1/53‑1 (MQ=255)
                                                  aTCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattt                                                                                                  >  7:397445‑M1/1‑99 (MQ=255)
                                                   tcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagttgacaaacatgatctcatatcatggacttgttcgcaccttccTTTGAGTTATCATTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAAccctctc                                                                                                >  8:302584‑M1/95‑146 (MQ=255)
                                                   tCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttca                                                                                                >  3:298614‑M1/1‑98 (MQ=255)
                                                     ggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccatatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCa                                                                                               >  6:26731‑M1/93‑148 (MQ=255)
                                                      ttGACCCCGCCGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttc                                                                                                 >  5:61342‑M1/1‑95 (MQ=255)
                                                      ttGACCCCGCCGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttc                                                                                                 <  6:61342‑M1/145‑51 (MQ=255)
                                                       cgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTa                                                                                            >  7:116019‑M1/91‑149 (MQ=255)
                                                        gaatgtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGCAGAGAATCAGGGCTTCGCAACCCTGTCATTaa                                                                                           >  5:208535‑M1/90‑149 (MQ=255)
                                                         aaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAag                                                                                          >  1:38618‑M1/89‑149 (MQ=255)
                                                           ggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAag                                                                                          <  5:98199‑M1/61‑1 (MQ=255)
                                                             taagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAaggagg                                                                                      <  1:397101‑M1/65‑1 (MQ=255)
                                                             taagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAaggagg                                                                                      >  7:270640‑M1/85‑149 (MQ=255)
                                                                tGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                   <  4:46534‑M1/149‑65 (MQ=255)
                                                                  tgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTa                                                                                 <  8:228022‑M1/70‑1 (MQ=255)
                                                                   ggcggGTTTGTCATTTGCGTTGCCTCAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGTTGTTTTggaaggtgctaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttttag                                                                                <  4:345358‑M1/149‑68 (MQ=255)
                                                                   ggcggGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggcaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag                                                                                <  6:146818‑M1/149‑68 (MQ=255)
                                                                     cggTGTTGTCATTTGCTTTGCCACAAGGGTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaatttgagaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag                                                                                <  6:178999‑M1/147‑68 (MQ=255)
                                                                           atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCaa                                                                        <  1:304844‑M1/79‑1 (MQ=255)
                                                                            gTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttt                                                                        <  5:278835‑M1/148‑76 (MQ=255)
                                                                               aTTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct                                                                    >  8:272810‑M1/1‑70 (MQ=255)
                                                                               aTTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttc                                                                     <  5:7447‑M1/148‑79 (MQ=255)
                                                                                   gctttgcCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg                                                                >  4:240167‑M1/1‑66 (MQ=255)
                                                                                   gctttgcCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccg                                                                >  5:34129‑M1/1‑66 (MQ=255)
                                                                                     tttgcCTCAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt                                                               >  3:350133‑M1/1‑64 (MQ=255)
                                                                                     tttgcCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt                                                               >  7:106156‑M1/1‑64 (MQ=255)
                                                                                     tttgcCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt                                                               >  8:244678‑M1/1‑64 (MQ=255)
                                                                                         ccACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcaggcatttcatttcttcatgtttgagccgattttttctcccgtaaat                                                           <  2:318161‑M1/148‑89 (MQ=255)
                                                                                           acaAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttaatgtttgagccgattttttctcccgtaaatgcc                                                        >  3:218155‑M1/1‑58 (MQ=255)
                                                                                            caAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcat                                                                                               >  4:96043‑M1/1‑57 (MQ=255)
                                                                                            caAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcat                                                                                               <  3:96043‑M1/109‑53 (MQ=255)
                                                                                              aGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt                                                      >  3:358741‑M1/1‑55 (MQ=255)
                                                                                               ggTTTCTCCTCTTTTATCAATTTGGGCTGTTATCAAATCGTTACGCGATGTTTGtgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttga                                                    <  1:353905‑M1/149‑96 (MQ=255)
                                                                                               gctccagatgacaaacatgatctcatatctgggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAg                                                    >  8:347744‑M1/51‑149 (MQ=255)
                                                                                               gctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTaa                                                     >  7:297383‑M1/51‑148 (MQ=255)
                                                                                               gctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAg                                                    >  2:126208‑M1/51‑149 (MQ=255)
                                                                                                    ctcctcTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatca                                                <  5:31319‑M1/148‑100 (MQ=255)
                                                                                                    cacctcttTTTTCATTTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatca                                                <  5:26192‑M1/146‑100 (MQ=255)
                                                                                                    agatgacaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAaggagg                                                                                      >  1:264879‑M1/46‑110 (MQ=255)
                                                                                                       ctctTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatgtcttcatggttgagccgattttttctcccgtaaatgccttgaatctgcc                                             >  4:280086‑M1/1‑46 (MQ=255)
                                                                                                        tctTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagccta                                           >  6:186038‑M1/1‑45 (MQ=255)
                                                                                                         ctTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgtcttgaatcagcctat                                          >  7:186761‑M1/1‑44 (MQ=255)
                                                                                                         acaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAgg                                                                                                                <  4:116579‑M1/39‑1 (MQ=255)
                                                                                                         acaaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGc                                          >  4:352660‑M1/41‑149 (MQ=255)
                                                                                                          ttttATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                   >  7:59840‑M1/1‑43 (MQ=255)
                                                                                                          ttttATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                   <  8:59840‑M1/107‑65 (MQ=255)
                                                                                                          caaacatgatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTg                                           <  2:260541‑M1/108‑1 (MQ=255)
                                                                                                                 gatctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCa                                    <  2:25980‑M1/115‑1 (MQ=255)
                                                                                                                  aTTTGGGTTGTTATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggatgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccatgaatcagcctatttagaccgt                                 >  8:382473‑M1/1‑35 (MQ=255)
                                                                                                                   tctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGtt                                            <  4:298740‑M1/107‑1 (MQ=255)
                                                                                                                   tctcatatcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGtt                                            >  3:298740‑M1/31‑137 (MQ=255)
                                                                                                                   tctcatataagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGtt                                            <  4:303993‑M1/107‑1 (MQ=255)
                                                                                                                        gttgttATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttc                           <  7:244678‑M1/149‑121 (MQ=255)
                                                                                                                          tcagggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTCCGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGAGAAAACt                         <  6:342153‑M1/126‑1 (MQ=255)
                                                                                                                            ttATCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatatcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcca                       >  3:6220‑M1/1‑25 (MQ=255)
                                                                                                                            agggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACtt                        >  7:228022‑M1/22‑148 (MQ=255)
                                                                                                                             tggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGACTAAGGGCTTCGAAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCAACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTAc                      >  5:84622‑M1/21‑149 (MQ=255)
                                                                                                                             gggacttgttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTa                                                                   >  8:382725‑M1/21‑104 (MQ=255)
                                                                                                                              aTCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatctcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccat                      <  4:6220‑M1/148‑126 (MQ=255)
                                                                                                                               tCAAATCGTTACGCGATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatt                     >  8:15566‑M1/1‑22 (MQ=255)
                                                                                                                                    gttcgcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCacta                 >  2:304844‑M1/14‑147 (MQ=255)
                                                                                                                                      gTTACGCGATGTTTGggaaggtgcgaataagcggcgaacttctgctcggctgactcagtcatttcatttcttcatgtttgagccgagtttttctcccgtaaattccttgaatcagcctatttagaccgtttcttcgccatttaaggc               <  4:218155‑M1/147‑133 (MQ=255)
                                                                                                                                        gcaccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACa            >  1:260541‑M1/10‑148 (MQ=255)
                                                                                                                                         caccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGc          <  2:117592‑M1/141‑1 (MQ=255)
                                                                                                                                         caccttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCAATACTACAGc          <  7:162147‑M1/141‑1 (MQ=255)
                                                                                                                                          cgccaggtttggcaaggtgcgaataagcgcggaaattcttctccgctgactcagtcatttcatttcttcatgtttgagccgattttatctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatc         <  4:6666‑M1/143‑139 (MQ=255)
                                                                                                                                           gcgATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcc        <  6:20417‑M1/149‑140 (MQ=255)
                                                                                                                                            cttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAg                                                    >  7:409254‑M1/6‑104 (MQ=255)
                                                                                                                                            cttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCactact               >  6:87600‑M1/6‑141 (MQ=255)
                                                                                                                                            cgATGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccc       <  8:177774‑M1/149‑141 (MQ=255)
                                                                                                                                             ttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATaaaa                           >  8:325557‑M1/5‑128 (MQ=255)
                                                                                                                                             ttccTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATaaaa                           <  7:325557‑M1/124‑1 (MQ=255)
                                                                                                                                              aTGTTTGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccca     <  1:331308‑M1/149‑143 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
TCTCTGTCGATGCTCTTCTGGGCCGAACTCCTCTGGATCATTACTCACTGATCCTTGACCCCGCTGCGGCGGGGTTGTCATTTGCTTTGCCACAAGGTTTCTCCTCTTTTATCAATTTGGGTTGTTATCAAATCGTTACGCGATGTTTGTGTTATCTTTAATATTCACCCTGAAGAGAATCAGGGCTTCGCAACCCTGTCATTAAGGAGGAGCTATGTCGTCAACCCTACGAGAAGCCAGTAAGGACACGTTGCAGGCCAAAGATAAAACTTACCACTACTACAGCCTGCCGCT  >  NC_000913/1335617‑1335910

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.