New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 493714 =70 (0.760)3 (0.030) 3/246 NT 4.6% coding (1623/1932 nt) dnaX DNA polymerase III/DNA elongation factor III, tau and gamma subunits
?NC_000913 493780 = 57 (0.650)coding (1689/1932 nt) dnaX DNA polymerase III/DNA elongation factor III, tau and gamma subunits
Rejected: Frequency below/above cutoff threshold.

CACGCCGAAGGCGCTGAAAAAAGCGCTGGAACATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGCTGAAGCGTTGAGCATGTTAAAAGGTTCAACGGTTGAACTGACTATCGTTGAA  >  NC_000913/493567‑493861
                                                                                                                                                   |                                                                                                                                                   
gcaagtttttcttcgtatatcgcctgacgccactccagcggcgtacgcaccgcgggattatcatcttcaacgatagtcagttcaaccgttgaaccttttaacatgctcaacgcttcagccagtttttgctgtgcaccgcggttgttcaa                                                                                                                                                    >  1:262487‑M1/148‑149 (MQ=255)
cACGCCGAAGGCGCTGAAAAAAGCGCTGGAACATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTaa                                                                                                                                                    <  4:309738/149‑1 (MQ=255)
cACGCCGAAGGCGCTGAAAAAAGCGCTGGAACATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTa                                                                                                                                                     >  6:272269/1‑148 (MQ=255)
 caagtttttcttcgtatatcgcctgacgccactccagcggcgtacgcaccgcgggattatcatcttcaacgatagtcagttcaaccgttgaaccttttaacatgctcaacgcttcagccagtttttgctgtgcaccgcggttgttcaaa                                                                                                                                                   >  7:124223‑M1/147‑149 (MQ=255)
 caagtttttcttcgtatatcgcctgacgccactccagcggcgtacgcaccgcgggattatcatcttcaacgatagtcagttcaaccgttgaaccttttaacatgctcaacgcttcagccagtttttgctgtgcaccgcggttgttcaaa                                                                                                                                                   >  7:232946‑M1/147‑149 (MQ=255)
 caagtttttcttcgtatatcgcctgacgccactccagcggcgtacgcaccgcgggattatcatcttcaacgatagtcagttcaaccgttgaaccttttaacatgctcaacgcttcagccagtttttgctgtgcacagcggttgttcaaa                                                                                                                                                   >  2:67833‑M1/147‑149 (MQ=255)
 aCGCCGAAGGCGCTGAAAAAAGCGCTGGAACATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTaaa                                                                                                                                                   <  2:365375/149‑1 (MQ=255)
  cGCCGAAGGCGCTGAAAAAAGCGCTGGAACATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAAt                                                                                                                                                  <  8:181061/149‑1 (MQ=255)
  cGCCGAAGGCGCTGAAAAAAGCGCTGGAACATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAAt                                                                                                                                                  <  2:253297/149‑1 (MQ=255)
  aagtttttcttcgtatatcgcctgacgccactccagcggcgtacgcaccgcgggattatcatcttcaacgatagtcagttcaaccgttgaaccttttaacatgctcaacgcttcagccagtttttgctgtgcaccgaggttgttcAAAt                                                                                                                                                  >  2:104928‑M1/146‑149 (MQ=255)
     tttttcttcgtatatcgcctgacgccactccagcggcgtacgcaccgcgggattatcatcttcaacgatagtcagttcaaccgttgaaccttttaacatgctcaacgcttcagccagtttttgctgtgcaccgcggttgttcAAATGcc                                                                                                                                               <  8:376150‑M1/7‑1 (MQ=255)
     tttttcttcgtatatcgcctgacgccactccagcggcgtacgcaccgcgggattatcatcttcaacgatagtcagttcaaccgttgaaccttttaacatgctcaacgcttcagccagtttttgctgtgcaccgcggttgttcAAATGcc                                                                                                                                               <  6:324555‑M1/7‑1 (MQ=255)
      gAAGGCGCTGAAAAAAGCGCTGGAACATGAAAAACCGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCt                                                                                                                                              <  5:31937/149‑1 (MQ=255)
      gAAGGCGCTGAAAAAAGCGCTGGAACATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCt                                                                                                                                              <  5:333657/149‑1 (MQ=255)
      gAAGGCGCTGAAAAAAGCGCTGGAACATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCt                                                                                                                                              <  3:14968/149‑1 (MQ=255)
      gAAGGCGCTGAAAAAAGCGCTGGAACATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCt                                                                                                                                              <  1:271479/149‑1 (MQ=255)
       aaGGCGCTGAAAAAAGCGCTGGAACATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTg                                                                                                                                             <  7:397913/149‑1 (MQ=255)
          gcgcTGAAAAAAGCGCTGGAACATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGaa                                                                                                                                          <  3:394588/149‑1 (MQ=255)
            tcgtatatcgcctgacgccactccagcggcgtacgcaccgcgggattatcatcttcaacgatagtcagttcaaccgttgaaccttttaacatgctcaacgcttcagccagtttttgctgtgcaccgcggttgttcAAATGCCTGGa                                                                                                                                           <  5:15304‑M1/11‑1 (MQ=255)
            gcTGAAAAAAGCGCTGGAACATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCGGTGGGCGACACAGGTGAGCCAACTTTCGCTACCATAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAag                                                                                                                                        <  2:371550/149‑1 (MQ=255)
              tGAAAAAAGCGCTGGAACATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAagag                                                                                                                                      >  8:14112/1‑149 (MQ=255)
                aaaataGCGCTGGAACATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGCCCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAagag                                                                                                                                      >  7:149736/1‑147 (MQ=255)
                aaaaaaGCGCTGGAACATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAagag                                                                                                                                      <  3:399935/147‑1 (MQ=255)
                 aaaaaGCGCTGGAACATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAgagga                                                                                                                                    <  8:171383/148‑1 (MQ=255)
                   aaaGCGCTGGAACATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGagag                                                                                                                                 >  4:205634/1‑149 (MQ=255)
                    aaGCGCTGGAACATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGc                                                                                                                                <  6:189679/149‑1 (MQ=255)
                            gAACATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACg                                                                                                                         >  5:183939/1‑148 (MQ=255)
                             aaCATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCa                                                                                                                       <  4:370627/149‑1 (MQ=255)
                             aaCATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCa                                                                                                                       <  2:383965/149‑1 (MQ=255)
                             aaCATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCa                                                                                                                       <  2:256013/149‑1 (MQ=255)
                               cATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTg                                                                                                                                             <  2:274810/125‑1 (MQ=255)
                               cATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTg                                                                                                                                             >  1:274810/1‑125 (MQ=255)
                               cATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGt                                                                                                                     <  5:37540/149‑1 (MQ=255)
                               cATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGt                                                                                                                     <  5:272269/149‑1 (MQ=255)
                               cATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGt                                                                                                                     <  1:266582/149‑1 (MQ=255)
                               actccagcggcgtacgcaccgcgggattatcatcttcaacgatagtcagttcaaccgttgaaccttttaacatgctcaacgcttcagccagtttttgctgtgcaccgcggttgttcAAATGcc                                                                                                                                               <  6:38519‑M1/7‑1 (MQ=255)
                               actccagcggcgtacgcaccgcgggattatcatcttcaacgatagtcagttcaaccgttgaaccttttaacatgctcaacgcttcagccagtttttgctgtgcaccgcggttgttcAAATGcc                                                                                                                                               >  5:38519‑M1/117‑123 (MQ=255)
                                aTGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTa                                                                                                                    <  7:363905/149‑1 (MQ=255)
                                aTGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTa                                                                                                                    >  8:229381/1‑149 (MQ=255)
                                aTGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTATCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTa                                                                                                                    <  1:232634/149‑1 (MQ=255)
                                  gAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTg                                                                                                                                             >  8:263877/1‑122 (MQ=255)
                                  gAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTg                                                                                                                                             <  7:263877/122‑1 (MQ=255)
                                  gAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAgaggag                                                                                                                                   >  7:106057/1‑132 (MQ=255)
                                  gAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAgaggag                                                                                                                                   <  8:106057/132‑1 (MQ=255)
                                  gAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATg                                                                                                                  >  2:136502/1‑149 (MQ=255)
                                   aaaaaaCGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATAGAGCGCCACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGTAGAGCGACAACGCGGTATGt                                                                                                                 >  7:159515/1‑149 (MQ=255)
                                     aacaCGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGTACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCt                                                                                                               <  3:229253/146‑1 (MQ=255)
                                           tacgcaccgcgggattatcatcttcaacgatagtcagttcaaccgttgaaccttttaacatgctcaacgcttcagccagtttttgctgtgcaccgcggttgttcaaa                                                                                                                                                   <  5:53875‑M1/3‑1 (MQ=255)
                                           tacgcaccgcgggattatcatcttcaacgatagtcagttcaaccgttgaaccttttaacatgctcaacgcttcagccagtttttgctgtgcaccgcggttgttcaaa                                                                                                                                                   >  6:53875‑M1/105‑107 (MQ=255)
                                               aaCTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTgcgc                                                                                                     >  3:351344/1‑149 (MQ=255)
                                                    gcggcgAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCGAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGctcctc                                                                                                <  4:85683/149‑1 (MQ=255)
                                                      ggcgAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTg                                                                                                        <  3:238268/139‑1 (MQ=255)
                                                      ggcgAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTg                                                                                                        >  4:238268/1‑139 (MQ=255)
                                                         gAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGc                                                                                           <  3:208539/149‑1 (MQ=255)
                                                         gAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGc                                                                                           >  5:198555/1‑149 (MQ=255)
                                                             cTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCa                                                                                       >  3:7072/1‑149 (MQ=255)
                                                             cTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCa                                                                                       <  7:229381/149‑1 (MQ=255)
                                                                gCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCAttt                                                                                    <  7:14112/149‑1 (MQ=255)
                                                                gCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCAtt                                                                                     <  3:372513/148‑1 (MQ=255)
                                                                  ggCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGa                                                                                  <  6:125143/149‑1 (MQ=255)
                                                                    cAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGaac                                                                                <  6:173027/149‑1 (MQ=255)
                                                                    cAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGaa                                                                                 >  4:213155/1‑148 (MQ=255)
                                                                    cAGAAGCCATTGAGCGCGACCCGTGCGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGaac                                                                                <  6:375624/149‑1 (MQ=255)
                                                                    aacgatagtcagttcaaccgttgaaccttttaacatgctcaacgcttcagccagtttttgctgtgcaccgcggttgttcAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGaac                                                                                >  6:15304‑M1/80‑149 (MQ=255)
                                                                    aacgatagtcagttcaaccgttgaaccttttaacatgctcaacgcttcagccagtttttgctgtgcaccgcggttgttcAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGaa                                                                                 <  3:10537‑M1/69‑1 (MQ=255)
                                                                         gCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACcg                                                                           >  5:324555/1‑149 (MQ=255)
                                                                           cATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACcgcg                                                                         >  3:43398/1‑149 (MQ=255)
                                                                             ttGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGt                                                                       <  6:198555/149‑1 (MQ=255)
                                                                                   gcgACCCGGGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTTGTCGAACATGTTGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCGGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGTTGCACAg                                                                 <  8:159515/149‑1 (MQ=255)
                                                                                             ccttttaacatgctcaacgcttcagccagtttttgctgtgcaccgcggttgttcAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTgg                                                       >  4:10537‑M1/55‑149 (MQ=255)
                                                                                                   acaGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGCTGAAg                                                 >  6:229243/1‑149 (MQ=255)
                                                                                                       gTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGCTGAAGCGtt                                             >  4:89266/1‑149 (MQ=255)
                                                                                                        tGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGCTGAAGCGtt                                             >  8:90650/1‑148 (MQ=255)
                                                                                                        tGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGCTGAAGCGtt                                             <  1:382276/148‑1 (MQ=255)
                                                                                                        tGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGCTGAAGCGTTg                                            <  3:205634/149‑1 (MQ=255)
                                                                                                          aGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGCTGAAGCGTTGAg                                          <  6:183939/149‑1 (MQ=255)
                                                                                                            ccAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGCTGAAGCGTTGAGc                                         <  7:90650/148‑1 (MQ=255)
                                                                                                            ccAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGCTGAAGCGTTGAGCa                                        <  4:351344/149‑1 (MQ=255)
                                                                                                              aaCTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGCTGAAGCGTTGAGCATg                                      <  7:117624/149‑1 (MQ=255)
                                                                                                                         ccAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGCTGAAGCGTTGAGCGTGTTAAAAGGtt                            >  3:20392/1‑148 (MQ=255)
                                                                                                                         ccAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGCTGAAGCGTTGAGCATGTTAAAAGGtt                            >  5:201301/1‑148 (MQ=255)
                                                                                                                         ccAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGCTGAAGCGTTGAGCATGTTAAAAGGTTc                           <  5:311681/149‑1 (MQ=255)
                                                                                                                           aaaaCTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGCTGAAGCGTTGAGCGTGTTAAAAGGTTCaa                         <  4:20392/149‑1 (MQ=255)
                                                                                                                           aaaaCTGGTCGAACAGGTGGAGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGAGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGATGAAGCGATGAGCatgttaaaatgttaaa                         >  5:234086/1‑149 (MQ=255)
                                                                                                                                  gTCGAACTGGTGGCGTTAAATGCCTGGATAGAGTAGAGCTACAACGCAGTATGTCTGCATTTGCGCTCGTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGCTGAATCGTTGAGCATGTTAAAAGGTTCAACGGtt                    <  1:136502/147‑1 (MQ=255)
                                                                                                                                  gTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGCTGAAGCGTTGAGCATGTTAAAAGGTTCAACGGtt                    <  3:89266/147‑1 (MQ=255)
                                                                                                                                    cGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTg                                                                                   <  7:363605/82‑1 (MQ=255)
                                                                                                                                    cGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTg                                                                                   >  8:363605/1‑82 (MQ=255)
                                                                                                                                       aCAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCGGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGCTGAAGCGTTGAGCATGTTAAAAGGTTCAACGGTTGAACTGa             <  6:412230/149‑1 (MQ=255)
                                                                                                                                           gTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGCTGAAGCGTTGAGCATGTTAAAAGGTTCAACGGTTGAACTGACTAt         >  8:17482/1‑149 (MQ=255)
                                                                                                                                              gCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGCTGAAGCGTTGAGCATGTTAAAAGGTTCAAc                        <  7:296151/131‑1 (MQ=255)
                                                                                                                                              gCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGCTGAAGCGTTGAGCATGTTAAAAGGTTCAAc                        >  8:296151/1‑131 (MQ=255)
                                                                                                                                                   aaaTGCCTGGAAAGAGGAGAGCGACAACGAAGTATGTCTGCATTTGCGCTCCTCTCCGCGGCATTTGAACAACCGCGGTGCACATCAACAACTGGCTGAAGCGTTGAGAATGTTAAAAGGTTCAACGGATGAACTGACTAGCGGTg    >  3:81365/1‑146 (MQ=255)
                                                                                                                                                   AAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGCTGAAGCGTTGAGCATGTTAAAAGGTTCAACGGTTTAACTGACTATCGTTGaa  >  3:213155‑M1/1‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
CACGCCGAAGGCGCTGAAAAAAGCGCTGGAACATGAAAAAACGCCGGAACTGGCGGCGAAGCTAGCGGCAGAAGCCATTGAGCGCGACCCGTGGGCGGCACAGGTGAGCCAACTTTCGCTACCAAAACTGGTCGAACAGGTGGCGTTAAATGCCTGGAAAGAGGAGAGCGACAACGCAGTATGTCTGCATTTGCGCTCCTCTCAGCGGCATTTGAACAACCGCGGTGCACAGCAAAAACTGGCTGAAGCGTTGAGCATGTTAAAAGGTTCAACGGTTGAACTGACTATCGTTGAA  >  NC_000913/493567‑493861

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.