| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2011761 | 108 (1.170) | 3 (0.030) | 3/248 | NT | 2.8% | pseudogene (280/678 nt) | yedN | pseudogene, IpaH/YopM family |
| ? | NC_000913 | = 2011775 | 108 (1.230) | pseudogene (266/678 nt) | yedN | pseudogene, IpaH/YopM family | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 129 total aligned reads displayed.
AGATTATTATCTACGGAGACCTGGGTAATTCCATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTGAAGTCATTCGATGCGCCTTCTTTTACT > NC_000913/2011619‑2011906 | atattattATCTACGGAGACCTTGGTATTTCAATCGGATAATTTTGGAAATACCATATAATTATTGAAATGGAGCTCTTATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGACGATAAAGCACCTCAATCCa < 6:397106/147‑1 (MQ=255)aGATTATTATCTACGGAGACCTGGGTAATTCCATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCa < 3:278768/149‑1 (MQ=255) gATTATTATCTACGGAGACCTGGGTAATTCCATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAg < 7:245597/149‑1 (MQ=255) gATTATTATCTACGGAGACCTGGGTAATTCCATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAg < 5:329010/149‑1 (MQ=255) attattATCTACGGAGACCTGGGTAATTCCATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAgg > 6:249319/1‑149 (MQ=255) tattatCTACGGAGACCTGGGTAATTCCATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGAt > 8:221948/1‑149 (MQ=255) tatCTTAGGAGACCTGGGTAATTCCATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATgg < 4:124527/148‑1 (MQ=255) tCTACGGAGACCTGGGTAATTCCATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGaa < 7:164556/148‑1 (MQ=255) cTACGGAGACCTGGGTAATTCCATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGaa > 1:374056/1‑147 (MQ=255) cGGAGACCTGGGTAATTCCATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAgag > 7:145412‑M2/1‑144 (MQ=255) cGGAGACCTGGGTAATTACATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTATTTGCAGAATTTGGGAATTTGTATTGTTGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGAGGGAAgaggt < 6:56323‑M2/149‑6 (MQ=255) ccTGGGTAATTCCATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCaaa < 3:55955/149‑1 (MQ=255) cTGGGTAATTCCATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGAAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCa > 8:43652/1‑146 (MQ=255) tGGGTAATTCCATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGa > 4:105540/1‑149 (MQ=255) tGGGTAATACCATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTAGTATTGTGGCAAGGCCATTATGAAGAAGAGAAAGCACCTCAATCCAGCATGGAAGAGGTGGCaaaca > 2:247290/1‑147 (MQ=255) ggTAATTCCATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGAcc > 2:39165/1‑149 (MQ=255) tAATTCCATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCT‑TCCATCCTGGATtgaggtgctttatcttcg > 7:158387‑M2/1‑131 (MQ=255) aTTCCATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCaa < 6:15029/149‑1 (MQ=255) aTTCCATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCaa < 7:43652/149‑1 (MQ=255) ccATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGt > 2:224940/1‑148 (MQ=255) cATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTg > 7:419734/1‑148 (MQ=255) cATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTg > 8:369424/1‑148 (MQ=255) cATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTg > 3:295846/1‑148 (MQ=255) cATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGACCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTg > 8:12850/1‑148 (MQ=255) ggATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTg > 8:188683/1‑144 (MQ=255) ggATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGAt < 7:430181/149‑1 (MQ=255) gATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATc > 7:258888/1‑149 (MQ=255) ttttGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCttccatcctggattgaggtgctttatct < 4:291897‑M1/130‑29 (MQ=255) ttttGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCttccatcctggattgaggtgctttatct > 3:291897‑M1/1‑102 (MQ=255) ttttGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGtt > 8:406304/1‑148 (MQ=255) ttttGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGtt > 3:345056/1‑148 (MQ=255) ttttGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGt > 1:112552/1‑147 (MQ=255) ttGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTaa < 8:217793/148‑1 (MQ=255) ttGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTaa < 7:221948/148‑1 (MQ=255) ttGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTaa < 2:103969/148‑1 (MQ=255) ttGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTaa < 7:406304/148‑1 (MQ=255) cATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTAc < 1:224940/149‑1 (MQ=255) tataATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTa > 2:137015/1‑149 (MQ=255) ataATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTAt > 8:38137/1‑149 (MQ=255) ttattGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATtgtg > 6:34874/1‑149 (MQ=255) ttattGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATtgtg < 1:254416/149‑1 (MQ=255) ttattGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTCACTATtgtg < 7:369424/149‑1 (MQ=255) ttGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGa < 5:270074/148‑1 (MQ=255) tGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGt > 1:106100/1‑149 (MQ=255) aaaTCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGAGGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGtt > 6:339264/1‑148 (MQ=255) aTCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCaa < 2:4945/149‑1 (MQ=255) aTCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGACCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCaa < 7:12850/149‑1 (MQ=255) tCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAac < 4:345056/149‑1 (MQ=255) gCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACAt > 2:142684/1‑149 (MQ=255) gCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACAt > 2:158517/1‑149 (MQ=255) ctAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGATGTGGCAAAGACCCCAAGTGAACATCAGATAAGTCAAGTATACTATTGTGGAGTTCAACACAatt > 5:136386/1‑148 (MQ=255) tAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTa > 1:58533/1‑148 (MQ=255) aTTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTaaa < 1:158517/148‑1 (MQ=255) aTTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTa < 4:397003/146‑1 (MQ=255) gCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCa > 7:409517/1‑149 (MQ=255) tttGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATg < 2:374056/149‑1 (MQ=255) gAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCtata < 8:324217/149‑1 (MQ=255) ttGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCca > 4:187528/1‑149 (MQ=255) gTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCcaca > 1:401651/1‑149 (MQ=255) gTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGCAGTTCAACACATTTAAACAATCTCACCAATGCTATATCcaca > 4:380409/1‑149 (MQ=255) aTTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATtgtg < 3:165779/104‑1 (MQ=255) ttGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACAttt > 1:179563/1‑149 (MQ=255) ttGTGGCAAGGCCAATATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGAGCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACAtt < 6:279884/148‑1 (MQ=255) tgtgaaGGCCATTATCACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGTTGGCTAAGACCCCAAGTGAAGATCTGTTAAGTCAAGATTACTATTGTGGAGTTCAACACATTTAAACAATGTCACCAATGCTATATCCACAtttttt < 6:136386/145‑1 (MQ=255) tgGCAAGGCCATTATGACGAAGATATAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTTGAGTTCAACACATTTAAACAATCTCACCAATGCTATATGCACAtttttt < 5:342450/149‑1 (MQ=255) gCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTa > 5:233043/1‑114 (MQ=255) gCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTa < 6:233043/114‑1 (MQ=255) gCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACAtttttttt > 8:56391/1‑149 (MQ=255) gCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACAttttttt < 2:156064/148‑1 (MQ=255) ctaGGCCTTTATGACGTAGATTATGCACCTGATTGCAGGTTGGATGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTTCTTTTGGGGAGTTCAACTCATTTAAACAATCTCACCAATGCTATTTCCACATTTTTTTTg < 3:365822/147‑1 (MQ=255) aaGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTg > 3:215249/1‑148 (MQ=255) aaGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTg > 7:344084/1‑148 (MQ=255) aGGCCATTATGACGAAGATAACGCCCCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTGaa < 1:162788/149‑1 (MQ=255) ggCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTGAAg > 4:341772/1‑149 (MQ=255) aTTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTGAAGTCAt < 2:106100/149‑1 (MQ=255) aTTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTGAAGTCAt < 2:179563/149‑1 (MQ=255) ttATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCAGCAATGCTATATCCACATTTTTTTTGAAGTCAtt < 1:176154/149‑1 (MQ=255) ttATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTGAAGTCAtt < 2:58533/149‑1 (MQ=255) ttATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTGAAGTCAt > 8:331844/1‑148 (MQ=255) ttATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTGAAGTCAt < 7:331844/148‑1 (MQ=255) ttATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGAGCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTGAAGTCAtt < 4:208775/149‑1 (MQ=255) tGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTGAAGTCATTCGa < 5:221626/149‑1 (MQ=255) gACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCACCACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTGAAGTCATTCGAt > 3:229415/1‑149 (MQ=255) aCGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTGAAGTCATTCGAt < 4:343080/148‑1 (MQ=255) aCGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTGAAGTCATTCGAt < 8:258888/148‑1 (MQ=255) aCGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTGAAGTCATTCGATg > 5:48821/1‑149 (MQ=255) cGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTGAAGTCATTCGATgc < 8:344084/149‑1 (MQ=255) aaGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGCGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTGAAGTCATTCGATgcgc < 1:39165/149‑1 (MQ=255) aGATAAAGCACCTCAATCCAGGATGGAAgaggtgctttatcttcgtcataatggccttgccacaatacaaattcccaaattctgcaaagaattagagctcgatttcaataattatatggtatttccaaaa < 4:291897‑M2/130‑103 (MQ=255) aGATAAAGCACCTCAATCCAGGATGGAAgaggtgctttatcttcgtcataatggccttgccacaatacaaattcccaaattctgcaaagaattagagctcgatttcaataattatatggtatttccaaaa > 3:291897‑M2/1‑28 (MQ=255) aaGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTGAAGTCATTCGATGCGCcttctt < 6:48821/149‑1 (MQ=255) aCCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTGAAGTCATTCGATGCGCCTTCTTTTAc > 3:359724/1‑149 (MQ=255) aCCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTGAAGTCATTCGATGCGCCTTCTTTTAc < 7:174109/149‑1 (MQ=255) ccTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTGAAGTCATTCGATGCGCCTTCTTTTACt > 5:157478/1‑149 (MQ=255) ctcttccatcctggattgaggtgctttatcttcgtcataatggccttgccacaatacaaattcccaaattctgcaaagaattagagctcgatttcaataattatatggtatttccaaaagtatccgatggaattacccaggtctccg > 7:145412‑M1/1‑3 (MQ=255) cTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACAt > 5:233270/1‑82 (MQ=255) cTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACAt < 6:233270/82‑1 (MQ=255) cTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTGAAGTCATTCGATGCGCCTTCttt < 5:313553/144‑1 (MQ=255) cTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTGAAGTCATTCGATGCGCCTTCttt > 6:313553/1‑144 (MQ=255) cTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTGAAGTCATTCGATGCGCCTTCTTTTACt > 6:242827/1‑148 (MQ=255) | AGATTATTATCTACGGAGACCTGGGTAATTCCATCGGATACTTTTGGAAATACCATATAATTATTGAAATCGAGCTCTAATTCTTTGCAGAATTTGGGAATTTGTATTGTGGCAAGGCCATTATGACGAAGATAAAGCACCTCAATCCAGGATGGAAGAGGTGGCAAAGACCCCAAGTGAAGATCTGTTAAGTCAAGTTTACTATTGTGGAGTTCAACACATTTAAACAATCTCACCAATGCTATATCCACATTTTTTTTGAAGTCATTCGATGCGCCTTCTTTTACT > NC_000913/2011619‑2011906 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |