New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2811916 =83 (1.070)3 (0.040) 3/252 NT 3.5% coding (490/1173 nt) emrA multidrug efflux system
?NC_000913 2811958 = 87 (1.180)coding (532/1173 nt) emrA multidrug efflux system
Rejected: Frequency below/above cutoff threshold.

AACCCACCAGCTGATGATTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGC  >  NC_000913/2811768‑2812063
                                                                                                                                                    |                                                                                                                                                   
agacataaccggtcatcggactgataatacgagtacgctccagcgccagccaggcgttacgtacttcggtggcagcctgttgcacggctggctgatcttccagtttagtccccagaatcatcgcctgattggcattgtattgttgaatc                                                                                                                                                     <  7:253597‑M1/1‑1 (MQ=255)
agacataaccggtcatcggactgataatacgagtacgctccagcgccagccaggcgttacgtacttcggtggcagcctgttgcacggctggctgatcttccagtttagtccccagaatcatcgcctgattggcattgtattgttgaatc                                                                                                                                                     >  7:346757‑M1/149‑149 (MQ=255)
 gacataaccggtcatcggactgataatacgagtacgctccagcgccatccaggcgttacgtacttcggtggcagcctgttgcacggctggctgatcttccagtttagtccccagaatcatcgcctgattggcattgtattgttgaatc                                                                                                                                                     >  2:95729‑M1/148‑148 (MQ=255)
 gacataaccggtcatcggactgataatacgagtacgctccagcgccagccaggcgttacgtacttcggtggcagcctgttgcacggctggctgatcttccagtttagtccccagaatcatcgcctgattggcattgtattgttgaatcg                                                                                                                                                    <  2:312138‑M1/2‑1 (MQ=255)
   ccaccaGCTGATGATTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACccgcccgcc                                                                                                                                                  >  8:137097/1‑148 (MQ=255)
   ccaccaGCTGATGATTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCcgcg                                                                                                                                                  >  3:184025/1‑149 (MQ=255)
    ataaccggtcatcggactgataatacgagtacgctccagcgccagccaggcgttacgtacttcggtggcagcctgttgcacggctggctgatcttccagtttagtccccagaatcatcgcctgattggcattgtattgttgaatCGCGa                                                                                                                                                 >  1:184766‑M1/145‑149 (MQ=255)
     taaccggtcatcggactgataatacgagtacgctccagcgccagccaggcgttacgtacttcggtggcagcctgttgcacggctggctgatcttccagtttagtccccagaatcatcgcctgattggcattgtattgttgaatCGCGAc                                                                                                                                                <  8:51518‑M1/6‑1 (MQ=255)
     taaccggtcatcggactgataatacgagtacgctccagcgccagccaggcgttacgtacttcggtggcagcctgttgcacggctggctgatcttccagtttagtccccagaatcatcgcctgagtggcattgtattgttgaatCGCGAc                                                                                                                                                <  4:155553‑M1/6‑1 (MQ=255)
     accaGCTGATGATTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGAc                                                                                                                                                >  2:336951/1‑149 (MQ=255)
       caGCTGATGATTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGc                                                                                                                                              >  6:15894/1‑149 (MQ=255)
        aGCTGATGATTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGcc                                                                                                                                             <  1:215959/149‑1 (MQ=255)
          cTGATGATTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGt                                                                                                                                           >  8:44822/1‑149 (MQ=255)
                atTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGCCTACAACCGCCGTGTGCCGCTGGGCAATGCCAGCCTGATTGGTCGCGAAGAGCTGCAACACGCCCCCGCCGCCGTCACCAg                                                                                                                                     >  8:75563/1‑149 (MQ=255)
                atTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCa                                                                                                                                      <  7:344439/148‑1 (MQ=255)
                atTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCa                                                                                                                                      <  1:296999/148‑1 (MQ=255)
                 ttAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGt                                                                                                                                    >  1:224504/1‑149 (MQ=255)
                   aaCAGCAAGCAGTTGCAGGCGAATATTGAGGGGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTg                                                                                                                                   <  5:223577/148‑1 (MQ=255)
                     cAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGccc                                                                                                                                <  1:336951/149‑1 (MQ=255)
                          agcaGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGt                                                                                                                                           <  8:233284/133‑1 (MQ=255)
                          agcaGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGt                                                                                                                                           >  7:233284/1‑133 (MQ=255)
                           gcaGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGgcg                                                                                                                           >  3:183/1‑148 (MQ=255)
                              gTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAAc                                                                                                                       >  4:106095/1‑149 (MQ=255)
                              gTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAAc                                                                                                                       >  8:114369/1‑149 (MQ=255)
                               ttGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACt                                                                                                                      >  5:324075/1‑149 (MQ=255)
                                    gctccagcgccagccaggcgttacgtacttcggtggcagcctgttgcacggctggctgatcttccagtttagtccccagaatcatcgcctgattggcattgtattgttgaatCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACg                                                                                                                 <  4:313089‑M1/37‑1 (MQ=255)
                                     gCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGt                                                                                                                >  2:128809/1‑149 (MQ=255)
                                        cagcgccagccaggcgttacgtacttcggtggcagcctgttgcacggctggctgatcttccagtttagtccccagaatcatcgcctgattggcattgtattgttgaatCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTcgc                                                                                                             >  3:313089‑M1/109‑149 (MQ=255)
                                          tatTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGCCTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGa                                                                                                           >  2:240160/1‑149 (MQ=255)
                                            ttGAGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGAtt                                                                                                         <  3:106095/149‑1 (MQ=255)
                                               aGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTcaa                                                                                                      <  2:166272/149‑1 (MQ=255)
                                                gccaggcgttacgtacttcggtggcagcctgttgcacggctggctgatcttccagtttagtccccagaatcatcgcctgattggcattgtattgttgaatCGCGACGCCGTCACCAGTGCCCAGGCGCAACTTGACGTCGCGATTcaac                                                                                                     >  8:140420‑M1/101‑149 (MQ=255)
                                                 gTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTcaac                                                                                                     >  7:6627/1‑148 (MQ=255)
                                                  tGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGCGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTccacaa                                                                                                   >  1:350510/1‑149 (MQ=255)
                                                       aaaaTCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTc                                                                                                               >  2:278155/1‑132 (MQ=255)
                                                       aaaaTCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTc                                                                                                               <  1:278155/132‑1 (MQ=255)
                                                       aaaaTCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAacaatacaa                                                                                              <  5:143851/149‑1 (MQ=255)
                                                       aaaaTCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAacaatacaa                                                                                              <  6:324075/149‑1 (MQ=255)
                                                       aaaaTCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAacaatacaa                                                                                              <  2:290675/149‑1 (MQ=255)
                                                       aaaaTCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGAGTCAacaatacaa                                                                                              >  1:290675/1‑149 (MQ=255)
                                                        aaaTCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAacaatacaat                                                                                             <  4:183/149‑1 (MQ=255)
                                                        aaaTCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAacaatacaat                                                                                             <  7:68372/149‑1 (MQ=255)
                                                        aaaTCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAacaatacaa                                                                                              <  8:72566/148‑1 (MQ=255)
                                                        aaaTCGACCTCGCGAAAGGACATAGCGACTACTACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAacaatacaa                                                                                              <  8:84374/148‑1 (MQ=255)
                                                         aaTCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATg                                                                                            <  2:224504/149‑1 (MQ=255)
                                                         aaTCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGGGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATg                                                                                            <  3:239296/149‑1 (MQ=255)
                                                                 tCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAg                                                                                    >  1:337672/1‑149 (MQ=255)
                                                                 tCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAg                                                                                    >  6:81120/1‑149 (MQ=255)
                                                                 tCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAg                                                                                    >  6:76277/1‑149 (MQ=255)
                                                                 tCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAg                                                                                    >  1:299803/1‑149 (MQ=255)
                                                                   gcgAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAgg                                                                                   <  5:337426/148‑1 (MQ=255)
                                                                     gAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCTACACGCCCGCGACGCCGTCACCAGTGCCGAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCga                                                                                <  5:177281/149‑1 (MQ=255)
                                                                      aaaGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGt                                                                                                                <  6:313028/116‑1 (MQ=255)
                                                                      aaaGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGt                                                                                                                >  5:313028/1‑116 (MQ=255)
                                                                         gCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCgatgat                                                                            >  4:29021/1‑149 (MQ=255)
                                                                             aaaGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCACCTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTg                                                                        >  1:312138/1‑149 (MQ=255)
                                                                             aaaGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTg                                                                        <  1:109586/149‑1 (MQ=255)
                                                                              aaGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTgg                                                                       <  7:114369/149‑1 (MQ=255)
                                                                              aaGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTgg                                                                       <  5:76277/149‑1 (MQ=255)
                                                                              aaGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTgg                                                                       <  5:81120/149‑1 (MQ=255)
                                                                               aGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTggg                                                                      <  8:265023/149‑1 (MQ=255)
                                                                               aGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTggg                                                                      <  1:128809/149‑1 (MQ=255)
                                                                               aGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTggg                                                                      <  7:45155/149‑1 (MQ=255)
                                                                               aGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTggg                                                                      <  5:15894/149‑1 (MQ=255)
                                                                                 cGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGa                                                                    <  1:219395/149‑1 (MQ=255)
                                                                                 cGACTACAACCGCCGTGTGCCGCTAGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGa                                                                    <  3:254781/149‑1 (MQ=255)
                                                                                     tACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTa                                                                 >  7:178896/1‑148 (MQ=255)
                                                                                      aCAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTaaa                                                               >  1:94185/1‑149 (MQ=255)
                                                                                        aaCCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACt                                                             >  8:176168/1‑149 (MQ=255)
                                                                                         aCCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTg                                                            >  3:190977/1‑149 (MQ=255)
                                                                                          ccgccgTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTgg                                                           <  2:94185/149‑1 (MQ=255)
                                                                                                 gtgCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGAt                                                      >  1:29738/1‑147 (MQ=255)
                                                                                                  tgCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGTCTCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATca                                                    <  5:124790/148‑1 (MQ=255)
                                                                                                  tgCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATca                                                    <  8:221717/148‑1 (MQ=255)
                                                                                                  tgCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATca                                                    <  4:262851/148‑1 (MQ=255)
                                                                                                     cGCTGGGCAATGCCAACCTGATTGGGCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATcagcca                                                <  4:184025/149‑1 (MQ=255)
                                                                                                       cTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATcagccagc                                              >  8:314400/1‑149 (MQ=255)
                                                                                                          ggCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCg                                            <  2:337672/148‑1 (MQ=255)
                                                                                                            cAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTg                                          >  5:330217/1‑148 (MQ=255)
                                                                                                               tGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCaa                                       >  5:190340/1‑148 (MQ=255)
                                                                                                                 ccAACCTGATTGGGCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACa                                     <  2:78713/148‑1 (MQ=255)
                                                                                                                       tGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGc                               >  5:82940/1‑148 (MQ=255)
                                                                                                                        gATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGCCa                             >  2:244590/1‑149 (MQ=255)
                                                                                                                         aTTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGcc                              <  6:82940/147‑1 (MQ=255)
                                                                                                                            ggTCGCGATGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGCTCAGCCAGCAGTGCAACAGGCTGCCACCg                          >  6:142930/1‑148 (MQ=255)
                                                                                                                             gTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGCCACCGaa                        <  8:186999/149‑1 (MQ=255)
                                                                                                                               cgcgAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGCCACCGAAg                       >  2:153581/1‑148 (MQ=255)
                                                                                                                                gcgAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTCGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGCGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGCCACCGAAGTa                     >  1:72662/1‑149 (MQ=255)
                                                                                                                                 cgAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGCCACCGAAGt                      >  5:296479/1‑147 (MQ=255)
                                                                                                                                 cgAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGCCACCGAAGt                      <  6:296479/147‑1 (MQ=255)
                                                                                                                                 cgAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGCCACCGAAGTAc                    <  8:178896/149‑1 (MQ=255)
                                                                                                                                  gAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGCCACCGAAGTACg                   >  3:101747/1‑149 (MQ=255)
                                                                                                                                  gAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGGCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGCCACCGAAGTACg                   <  7:137097/149‑1 (MQ=255)
                                                                                                                                     gagCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCAATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGCCACCGAAGTACGTaa                <  8:139990/149‑1 (MQ=255)
                                                                                                                                             acacGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGCCACCGAAGTACGTAACGCctggc        >  7:267299/1‑149 (MQ=255)
                                                                                                                                               acGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGCCACCGAAGTACGTAACGCctggctg      <  1:244590/149‑1 (MQ=255)
                                                                                                                                                 gCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGCCACCGAAGTACGTAACGCCtggctggc    <  4:190977/149‑1 (MQ=255)
                                                                                                                                                   ccGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGgcgc  >  2:221713/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
AACCCACCAGCTGATGATTAACAGCAAGCAGTTGCAGGCGAATATTGAGGTGCAGAAAATCGCCCTCGCGAAAGCACAAAGCGACTACAACCGCCGTGTGCCGCTGGGCAATGCCAACCTGATTGGTCGCGAAGAGCTGCAACACGCCCGCGACGCCGTCACCAGTGCCCAGGCGCAACTGGACGTCGCGATTCAACAATACAATGCCAATCAGGCGATGATTCTGGGGACTAAACTGGAAGATCAGCCAGCCGTGCAACAGGCTGCCACCGAAGTACGTAACGCCTGGCTGGCGC  >  NC_000913/2811768‑2812063

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.