| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3376260 | 111 (1.150) | 6 (0.070) | 5/248 | 10.0 | 5.7% | intergenic (+24/+19) | dcuD/sspB | putative transporter/ClpXP protease specificity enhancing factor |
| ? | NC_000913 | = 3376265 | 98 (1.120) | intergenic (+29/+14) | dcuD/sspB | putative transporter/ClpXP protease specificity enhancing factor | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCCGATTACTGCGGTGGTGGTCGTTACGTCAGGAATTGCAGGCGTTTCGCCTTTTGCGGTGGTGAAGCGGACAGCGATCCCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3376101‑3376260‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaaaacaggccCAGGCGGCCTGTTTTGTCTTTTTAATGACTTAATAAAATAGCGTGATTGTGGCAATCATATTCACCACGAAACCGACTGCCATGGGGATCGCTGTCCGCTTCACCACCGCAAAAGGCGAAACGCCTGCAATTCCTGACGTAACGACCA < NC_000913/3376265‑3376118 GCCGATTACTGCGGTGGTGGTCGTTACGTCAGGAATTGCAGGCGTTTCGCCTTTTGCGGTGGTGAAGCGGACAGCGATCCCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGA > 2:403511/1‑149 ACTGCGGTGGTGGTCGTTACGTCAGGAATTGCAGGCGTTTCGCCTTTTGCGGTGGTGAAGCGGACAGCGATCCCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAA > 7:401984/1‑147 CTGCGGTGGTGGTCGTTACGTCAGGAATTGCAGGCGTTTCGCCTTTTGCGGTGGTGAAGCGGACAGCGATCCCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAG < 1:73209/149‑1 CGTCAGTAATTGCAGGCGTTTCGCCTTTTGCGGTGGTGAAGCGGACAGCGATCCCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCCAGGCGGCCTGTTTT < 4:21243/149‑1 GAATTTCAGGCGTTTCGCCTTTTGCGGTGGTGAAGCGGACAGAGATCCCCATGGCAGTCGGTTTCGTGGTTAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAA < 4:384750/120‑1 GAATTGCAGGCGTTTCGGCTTTTGCCGTGGTGAAGCGGACAGCGATCCCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATAACGCTATTTTATTAAGTCATTAAAAAGACAA > 3:384750/1‑120 GTGAAGCGGACAGCGATCCCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCCAGGCGGCCTGTTTTGTCTTTTTAATGACTTAATAAAATAGCGTGATTGT < 8:401984/149‑1 GAAGCGGACAGCGATCCCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGAC > 3:169904/1‑87 GAAGCGGACAGCGATCCCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGAC < 4:169904/87‑1 AAGCGGACAGCGATCCCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCCAGGCGGCCTGTTTTGTCTTTTTAATGACTTAATAAAATAGCGTGATTGTG < 2:183395/147‑1 AAGCGGACAGCGATCCCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCCAGGCGGCCTGTTTTGTCTTTTTAATGACTTAATAAAATAGCGTGATTGTG > 1:183395/1‑147 CCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCCAGGCGGCCTGTTTT > 8:73811/1‑96 CCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCCCAGGCGGCCTGTTTT < 7:73811/96‑1 ACAAAACAGGCCCATGGGGTCTGTTTTGTCTTTTTATTGACTTAATAAAATTGCGTGATTGTGGGAATCATATTCACCACGAAACCGACTGCCATGGGGAGCGCTGTCCGCTTCACCACCGGAAAAGG < 8:193247/128‑1 ACAAAACAGGCCCAGGCGGCCTGTTTTGTCTTTTTAATGACTTAATAAAATAGCGTGATTGTGGCAATCATATTCACCACGAAACCGACTGCCATGGGGATCGCTGTCCGCTTCACCACCGCAAAAGGCGAAACGCCTGCAATTC > 4:27399/1‑145 ACAAAACAGGCCCAGGCGGCCTGTTTTGTCTTTTTAATGACTTAATAAAATAGCGTGATTGTGGCAATCATATTCACCACGAAACCGACTGCCATGGGGATCGCTGTCCGCTTCACCACCGCAAAAGGCGAAACGCCTGCAATTC < 3:27399/145‑1 ACAAAACAGGCCCAGGCGGCCTGTTTTGTCTAATTAATGACTTAATAAAATAGCGTGATTGAGGCAATCATATTCACCCCGAAACCGACTGCCATGGGGATCGCTGTCCGCTTCACCACCGCAAAAGG > 7:193247/1‑128 CAAAACAGGCCCAGGCGGCCTGTTTTGTCTTTTTAATGACTTAATAAAATAGCGTGATTGTGGCAATCATATTCACCACGAAACCGACTGCCATGGGGATCGCTGTCCGCTTCACCACAGCAAAAGGCGAAACGCCTGCAATTACTGcc > 5:351363/1‑147 AAAACAGGCCCAGGCGGCCTGTTTTGTCTTTTTAATGACTTAATAAAATAGCGTGATTGTGGCAATCATATTCACCACGAAACCGACTGCCATGGGGATCGCTGTCCGCTTCACCACCGCAAAAGGCGAAACGCCTGCAATTCCTGACG > 7:297848/1‑149 AAAACAGGCCCAGGCGGCCTGTTTTGTCTTTTTAATGACTTAATAAAATAGCGTGATTGTGGCAATCATATTCACCACGAAACCGACTGCCATGGGGATCGCTGTCCGCTTCACCACCGCAAAAGGCGAAACGCCTGCAATTCCTGACG > 2:378535/1‑149 AAAACAGGCCCAGGCGGCCTGTTTTGTCTTTTTAATGACTTAATAAAATAGCGTGATTGTGGCAATCATATTCACCACGAAACCGACTGCCATG > 7:256725/1‑94 AAAACAGGCCCAGGCGGCCTGTTTTGTCTTTTTAATGACTTAATAAAATAGCGTGATTGTGGCAATCATATTCACCACGAAACCGACTGCCATG < 8:256725/94‑1 AAACAGGCCCAGGCGGCCTGTTTTGTCTTTTTAATGACTTAATAAAATAGCGTGATTGTGGCAATCATATTCACCACGAAACCGACTGCCATGGGGATCGCTGTCCGCTTCACCACCGCAAAAGGCGAAACGCCTGCAATTCCTGACGT < 3:288418/149‑1 CCAGGCGGCCTGTTTTGTCTTTTTAATGACTTAATAAAATAGCGTGATTGTGGCAATCATATTCACCACGAAACCGACTGCCATGGGGATCGCTGTCCGCTTCACCACCGCAAAAGGCGAAACGCCTGCAATTCCTGACGTGACGACCA > 1:425077/1‑149 GCCGATTACTGCGGTGGTGGTCGTTACGTCAGGAATTGCAGGCGTTTCGCCTTTTGCGGTGGTGAAGCGGACAGCGATCCCCATGGCAGTCGGTTTCGTGGTGAATATGATTGCCACAATCACGCTATTTTATTAAGTCATTAAAAAGACAAAACAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3376101‑3376260‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acaaaacaggccCAGGCGGCCTGTTTTGTCTTTTTAATGACTTAATAAAATAGCGTGATTGTGGCAATCATATTCACCACGAAACCGACTGCCATGGGGATCGCTGTCCGCTTCACCACCGCAAAAGGCGAAACGCCTGCAATTCCTGACGTAACGACCA < NC_000913/3376265‑3376118 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |