| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4524799 | 19 (0.680) | 4 (0.160) | 4/246 | 2.9 | 20.2% | coding (212/906 nt) | yjhH | putative lyase/synthase |
| ? | NC_000913 | = 4524824 | 14 (0.550) | coding (187/906 nt) | yjhH | putative lyase/synthase | |||||
TCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCTAAATTCACCACCGGTACCCAGATAAAACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATC > NC_000913/4524658‑4524947 | tcAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGa > 3:43147/1‑148 (MQ=255) aGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCgaagaagctg > 4:4052‑M1/1‑139 (MQ=255) gATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATg > 7:98209/1‑149 (MQ=255) aTTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATgg < 8:98209/149‑1 (MQ=255) tttCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGt < 6:81236/149‑1 (MQ=255) cTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGATACAGCTTCTTCg > 4:43147‑M2/1‑148 (MQ=255) agtagtAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCgaagaagctgtaaccattgtcgacgggcgagt < 3:4052‑M1/149‑33 (MQ=255) gggTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACaa < 3:26035/118‑1 (MQ=255) gggTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACaa > 4:26035/1‑118 (MQ=255) tGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCgaagaagctgtaaccattgtcgacgg > 8:46823‑M1/1‑102 (MQ=255) tGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCgaagaagctgtaaccattgtcgacgg < 7:46823‑M1/128‑27 (MQ=255) tGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTc < 5:125420/106‑1 (MQ=255) tGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTc > 6:125420/1‑106 (MQ=255) cgacgaTACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTa < 5:115244/149‑1 (MQ=255) gcCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTgg > 7:7141/1‑105 (MQ=255) gcCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTgg < 8:7141/105‑1 (MQ=255) tGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCTAAATTCACCACCGGTACCCAGATAAAACAGccc < 8:53015/148‑1 (MQ=255) aGTTGAAGGGGATCCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGTTTACAGCTTCTTCGGCGAGTGCCATGCGCTGTGCTGTATTCAttt < 8:7777/98‑1 (MQ=255) aGTGGAAGGGGAACCGACGCCAATCAAAACCGGCAATAGCCCGTCGAAAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTCTATTCAttt > 7:7777/1‑98 (MQ=255) aGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCTAAATTCACCACCGGTACCCAGATAAAACAg > 1:71494/1‑126 (MQ=255) aGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCTAAATTCACCACCGGTACCCAGATAAAACAg < 2:71494/126‑1 (MQ=255) ccAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCTAAATTCACCACCGGTACCCAGATAAAACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAAc > 1:72488/1‑149 (MQ=255) gCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCTAAATTCACCACCGGTACCCAGATAAAACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGcc < 2:72488/149‑1 (MQ=255) aCTCGCCCGTCGACAATGGTTACAGCTTCTTCggcgagtgccggtattgattggcgtcggttccccttccactgacgaagcggtcaaactggcgcagcatgcgcaagcctacggcgctgatggtatcgtcgccatcaacccctactact < 3:4052‑M2/149‑118 (MQ=255) cgaagaagctgtatccattgtcgacgggcgagtgccggtattgattggcgtcggttccccttccactgacgaagcggtcaaactggcgcagcatgcgcaagcctacggcgctgatggtatcgtcgccatcaacccctactactggaaag > 4:43147‑M1/1‑1 (MQ=255) ccGTCGACAATGGTTACAGCTTCTTCggcgagtgccggtattgattggcgtcggttccccttccactgacgaagcggtcaaactggcgcagcatgcgcaagcctacggcgctgatggtatcgtcgcca < 7:46823‑M2/128‑103 (MQ=255) ccGTCGACAATGGTTACAGCTTCTTCggcgagtgccggtattgattggcgtcggttccccttccactgacgaagcggtcaaactggcgcagcatgcgcaagcctacggcgctgatggtatcgtcgcca > 8:46823‑M2/1‑26 (MQ=255) ccGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCTAAATTCACCACCGGTACCCAGATAAAACAGCCCGTCGACCCCTTTATTAATCAGGaa < 2:81781/119‑1 (MQ=255) | TCAAGATTTCGTGGTGCGACTTTCCAGTAGTAGGGGTTGATGGCGACGATACCATCAGCGCCGTAGGCTTGCGCATGCTGCGCCAGTTTGACCGCTTCGTCAGTGGAAGGGGAACCGACGCCAATCAATACCGGCACTCGCCCGTCGACAATGGTTACAGCTTCTTCGGCGAGTGCCATGCGCTGGGCTGTATTCATTTGGCTAAATTCACCACCGGTACCCAGATAAAACAGCCCGTCGACCCCTTTATTAATCAGGAAGTCGGCAACTTCGCGCATTGCCTTTTTATC > NC_000913/4524658‑4524947 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |