| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 715247 = | NA (NA) | 4 (0.150) +CAGTCTCA |
4/250 | 2.9 | NA | intergenic (+49/‑165) | pgm/ybfP | phosphoglucomutase/lipoprotein |
| ? | NC_000913 | = 3012605 | NA (NA) | intergenic (+212/+9) | yqeA/yqeB | putative amino acid kinase/XdhC‑CoxI family protein with NAD(P)‑binding Rossman fold | |||||
CGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACC‑ATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGTTTCACCACGAGGAT > NC_000913/3012465‑3012750 | cggcgCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACC‑ATCCGGCCATTTTCa < 1:21135/148‑1 (MQ=255) gcgcGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGATGG‑TATTACCCACCCGGCCtgagactgat > 6:40545‑M2/1‑139 (MQ=255) cgcgAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGGCATCAGTCTCAGGCCGGATGG‑TATTACCCACCCGGCCtgagactgatg > 5:75807‑M2/1‑138 (MQ=255) cTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACC‑ATCCGGCCATTTTCATTTAAGCCACTTc < 3:4849/149‑1 (MQ=255) cTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGATGG‑TATTACCCACCCGGCCtgagactgatgacaaac < 1:138902‑M2/146‑18 (MQ=255) cTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGATGG‑TATTACCCACCCGGCCtgagactgatgacaaac > 2:138902‑M2/1‑129 (MQ=255) tACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACC‑ATCCGGCCATTTTCATTTAAGCCACTTCCAGCActtctt > 6:3190/1‑149 (MQ=255) aaTAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACC‑ATCCGGCCATTTTCATTTaa > 8:59411/1‑111 (MQ=255) aaTAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACC‑ATCCGGCCATTTTCATTTaa < 7:59411/111‑1 (MQ=255) cACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACC‑ATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAAcatca < 5:3190/149‑1 (MQ=255) gTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACC‑ATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAAc > 5:36892/1‑149 (MQ=255) gCCTGATAAGCGTAGCGCATCAGGCGATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACC‑ATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCAc < 7:49441/120‑1 (MQ=255) gCCTGATAAGCGTAGCGCATCAGGCGATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACC‑ATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCAc > 8:49441/1‑120 (MQ=255) cTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACC‑ATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTc > 2:60051/1‑148 (MQ=255) tGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACC‑ATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATc < 7:34495/130‑1 (MQ=255) tGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACC‑ATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATc > 8:34495/1‑130 (MQ=255) gcgccgcATCCGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACC‑ATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTc < 5:26519/135‑1 (MQ=255) gcgccgcATCCGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACC‑ATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTc > 6:26519/5‑139 (MQ=255) aTCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACC‑ATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTACGCCGCCGCCa > 3:30117/1‑148 (MQ=255) tCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCTGGTGGGTAATACC‑ATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGa < 3:50891/108‑1 (MQ=255) tCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACC‑ATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGa > 4:50891/1‑108 (MQ=255) gTCTCAGGCCGGGTGGGTAATACC‑ATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTg > 2:2705/1‑149 (MQ=255) cc‑ATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAACCGCTGATTTcacca < 1:60051/148‑1 (MQ=255) ggCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGTTTCACCACGAGGAt < 2:126905/149‑1 (MQ=255) ggCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGTTTCACCACGAGGAt > 1:126905/1‑149 (MQ=255) | CGGCGCGAGCGCCTTATCCGTCCTACAAAACATCGCAAATTCAATAGATTGCAATGCACTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTGGCGTTTGTCATCAGTCTCAGGCCGGGTGGGTAATACC‑ATCCGGCCATTTTCATTTAAGCCACTTCCAGCACTTCTTTTGTCGCTTTCACGCCCTGATGCATCAACATCATTAACGCCTCAAGTACGCCGCCGCCAATCGCCCGGGCTTTATCAGAAACGCTGGTGAAATCAGCGGTTTCACCACGAGGAT > NC_000913/3012465‑3012750 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |