| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3028494 = | 20 (0.720) | 4 (0.150) | 4/248 | 2.9 | 17.2% | intergenic (+6/+30) | ghxQ/ygfS | guanine/hypoxanthine permease, high affinity; guanine/hypoxanthine:H+ symporter/putative 4Fe‑4S ferredoxin‑type oxidoreductase subunit |
| ? | NC_000913 | 3028518 = | 20 (0.770) | intergenic (+30/+6) | ghxQ/ygfS | guanine/hypoxanthine permease, high affinity; guanine/hypoxanthine:H+ symporter/putative 4Fe‑4S ferredoxin‑type oxidoreductase subunit | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACACTGGTCGTAGGCCGCGTCTTTGCACGCGAATGGCAAAAGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAACTGCAGCGCCTGTGTTGGGCAAGATTCAACGCAGGCTGGCCCCTCTTCCCG > NC_000913/3028378‑3028646 | acacTGGTCGTAGGCCGCGTCTTTGCACGCGAATGGCAAAAGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCa < 2:5112/149‑1 (MQ=255) aaGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCg > 4:18493/1‑149 (MQ=255) gCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTTCTGGCGGa < 8:112923/149‑1 (MQ=255) aaTATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCa < 5:93587/104‑1 (MQ=255) aaTATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCa > 6:93587/1‑104 (MQ=255) tgaaagagaactcaggcgagtccgccagcagcgtattgttgccagcggtgagaatcctctctgaaagaaaTCTCCGCGCCTTTCAGCGCGGAGAtttctt < 1:61390‑M1/30‑1 (MQ=255) tgaaagagaactcaggcgagtccgccagcagcgtattgttgccagcggtgagaatcctctctgaaagaaaTCTCCGCGCCTTTCAGCGCGGAGAtttctt > 2:61390‑M1/71‑100 (MQ=255) aggcgagtccgccagcagcgtattgttgccagcggtgagaatcctctctgaaagaaaTCTCCGCGCTGAAAGGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACgctgc < 5:109245‑M1/67‑1 (MQ=255) aggcgagtccgccagcagcgtattgttgccagcggtgagaatcctctctgaaagaaaTCTCCGCGCTGAAAGGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACgctgc > 6:109245‑M1/58‑124 (MQ=255) tGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGc > 8:112960/1‑148 (MQ=255) cGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAACt < 3:18493/149‑1 (MQ=255) gcagcgtattgttgccagcggtgagaatcctctctgaaagaaatctccgcgcctttcagcgcggagaTTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCt < 5:109245‑M2/57‑1 (MQ=255) gcagcgtattgttgccagcggtgagaatcctctctgaaagaaatctccgcgcctttcagcgcggagaTTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCt > 6:109245‑M2/68‑124 (MQ=255) gTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGa < 8:99709/112‑1 (MQ=255) gTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGa > 7:99709/1‑112 (MQ=255) ttGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAACTGCAGCGCCTGTGTTGGGCAAGATTCaa < 7:112960/149‑1 (MQ=255) aaTAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAACTGCAGCGCCTGTGTTGGGCAAGATTc > 8:91767/1‑136 (MQ=255) aagaaatctccgcgctgaaaggcgcggagaTTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCa < 1:61390‑M2/70‑1 (MQ=255) aagaaatctccgcgctgaaaggcgcggagaTTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCa > 2:61390‑M2/31‑100 (MQ=255) aTAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGcaa > 4:92409/1‑62 (MQ=255) aTAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGcaa < 3:92409/62‑1 (MQ=255) aTAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAACTGCAGCGCCTGTGTTGGGCAAGATTCAACGCAg < 5:44740/142‑1 (MQ=255) aTAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAACTGCAGCGCCTGTGTTGGGCAAGATTCAACGCAg > 6:44740/1‑142 (MQ=255) aGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAACTGCAGCGCCTGTGTTgg > 4:75036/1‑124 (MQ=255) aGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAACTGCAGCGCCTGTGTTgg < 3:75036/124‑1 (MQ=255) ttCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCa > 6:94687/1‑95 (MQ=255) tCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTc > 7:11204/1‑81 (MQ=255) tCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTc < 8:11204/81‑1 (MQ=255) cgcggagaTTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAACTGCAGCGCCTGTGTTGGGCAAGATTCAACGCAGGCTGGCCCCTCTTCCCg < 4:30029‑M2/129‑1 (MQ=255) cgcggagaTTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAACTGCAGCGCCTGTGTTGGGCAAGATTCAACGCAGGCTGGCCCCTCTTCCCg > 3:30029‑M2/9‑137 (MQ=255) | ACACTGGTCGTAGGCCGCGTCTTTGCACGCGAATGGCAAAAGCTGAATATTGGTACGGTGATCATTACTGCCGCACTGGTCGCATTTTACGCGGGTGGTTGGGCAATCTAATAGATTCTCCGCGCCTTTCAGCGCGGAGATTTCTTTCAGAGAGGATTCTCACCGCTGGCAACAATACGCTGCTGGCGGACTCGCCTGAGTTCTCTTTCAGTAAGCAACTGCAGCGCCTGTGTTGGGCAAGATTCAACGCAGGCTGGCCCCTCTTCCCG > NC_000913/3028378‑3028646 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |